Aythya fuligula (tufted duck): 116488285
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Entry
116488285 CDS
T07966
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aful04990
]
116488285 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
aful04990
]
Other domain-containing proteins
Patched domain-containing proteins
116488285 (PTCHD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
116488285
NCBI-ProteinID:
XP_032041659
UniProt:
A0A6J3CU53
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Position
1:complement(124250912..124281301)
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AA seq
888 aa
AA seq
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MLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPTH
SLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYGRVIITSFRKANMLDQHHTDLILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSNRTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTVELF
QKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITSLVLVVTLAILCCSMQDCVRSKPWLG
LLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTTDSEETNTYES
HLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNIVATATRTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
STGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETKREE
LYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFLVAD
SLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKE
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggtcttgcacagggggctggggacgtccttctcccggctcggccacttc
gtcgccagccacccggtgttcttcgcctcggcgcccgtgctcatctccatcctgctgggc
gccagcttcagccgctaccaggtggaggagagcgtggagcacctcctggcccccacgcac
agcctggccaagatcgagaggaacctggtggacagcctcttcccggtgaaccgctccaag
caccggctctactccgacctgcagacgccggggaggtacggcagggtgatcatcacctcc
ttccgcaaggccaacatgctggaccagcaccacaccgatctcatcctcaagttgcactct
gctgtgaccaggatccaagttcaaagacctggtttcaattacacgtttgcccatatatgt
atcctgaacaatgacaagacatgcatagtggacgacatagtgcatgtgctggaggaatta
aaggctgctcgttcttctaatcgaactaattttgcaatcacttatccgattactcactta
aaggatggcagggaagtgtataatgggcatcagcttggtggggttactgtgcacagcaaa
gaccgggtgaagtctgcagaagccattcagctcacctactacttgcaggcaatcaactcc
ttgaatgacatggtggcagaaaagtgggaatccattttttgtgacactgttgaacttttc
cagaaatccaacaggaaagtcaaaatgtaccctttcacttcttcttcgctgaaggaggat
ttccagaagacgagcagggtgtcagaacgctacctgatcacaagcttggtccttgtggtc
accttggccattctctgctgctccatgcaggattgtgtccgcagcaaaccctggcttggc
ctgctgggattgctgactgtgacccttgccaccctgactgcagctgggatcatcaatctc
actggtgggaaatacaattccaccttcctggggatccccttcgtcatgttaggtcatggg
ttatatgggacatttgaaatgttgtcctcctggagaaaaactagagaagaccaacatgtt
aaagagaggactgcagccgtatttgcagactccatgctctcgttttctctcaccactgcc
atgtacctggtcacttttggaataggtgccagtcccttcactaacattgaagcagccagg
attttctgctgcaattcctgtattgcaattttcttcaactacctctatgtactctccttt
tatggttccagcctggtgtttactggctacatagaaaacaactaccagcatagtatcttc
tgtagaaaggtaccaaagccagaggtattgcaagagaagcctgcatggtataggtttctt
ctgacagccagattcagcgaggacacgacagattcagaggaaacgaacacctatgagagt
catcttttggtgtggttccttaaacgttattattgtgactggataacaaacacttatgtc
aagccttttgtagttctcttttaccttgtttatatttcctttgccttaatgggctacctg
caggtcagtgaagggtcagacctgagcaacatcgtagcgaccgccacacggaccattgag
tatactactgcccagcagaagtatttcagtaactacagcccagtgattgggttctacatc
tacgagtcaatagagtactggaacaccagtgtccaggaggacgtgctggagtataccaag
ggctttgtgaggatatcttggtttgagagctacttaaattaccttaggaaactcaacata
tctaccggattgcccaagaaaaatttcactgatatgttgaggaactccttcttgaaggcc
cctcagtttgcccatttttcagaggatatcatcttttccaagaaatacaacaatgaagtc
gatgttgtggcctccaggatgttcttggtggccaagacaatggaaaccaagagggaagaa
ctttatgacctcctggagaccctgaggaagctctctctcacctccaaggtgaaattcatc
gttttcaatccatcatttgtgtacatggatcgttatgcctcttcagtgggagccccttta
caaaactcctgcattagtgctttatttctgctcttcttctctgcattcctggtggcagac
tctctgatcaatgtctggctcactctaactgttgcctcggttgagtttggagttataggt
tttatgaccttgtggaaagtggaactagattgtatttctgtgttgtgcttaatttacgga
attaattacacaattgacaactgtgctccactgttatcaacctttgtcctgggcaaagaa
ttcacaagaactaaatgggtgaaaaatgccctggaagtgcatggggtagctattttgcag
agctacctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
cgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcactgctttgcc
attttacctgtgatattgactttcctgccaccgtccaagaagaagaggaaagagaagaag
aatcctgaaaaccgtgaggaaatagagtgtgtcgaaatggtggatatggatagcacccga
gtggttgaccaaattacaacagtctaa
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