Aythya fuligula (tufted duck): 116488471
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Entry
116488471 CDS
T07966
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04110
Cell cycle
aful04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116488471 (SMC1B)
04114 Oocyte meiosis
116488471 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116488471 (SMC1B)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116488471 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
116488471 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
116488471
NCBI-ProteinID:
XP_032041957
UniProt:
A0A6J3CYF8
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All DBs
Position
1:72356678..72391711
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AA seq
1233 aa
AA seq
DB search
MGYLKLLVMKDFKSWRGEQVIGPFMRFNCIIGPNGAGKSNIMDAVSFVMCEKISNLRVKS
VRELIHGAHVGKPVSSTASVKIVYCEEDGEEKTFSRVIRGTCSEFIFNDKTVTRSTYISE
LEKIGILVKARNCLIFQGTVELIAMKKPKERTQLFEQISNSWQYAEEYERKKKKMEQAEE
DAHFNYNKKKSIAAERKQAKMEKEEADRYQMLIKEMHENRIQLQLFQLYYNEKNIDFMKK
RLDEKNMEASIKKDSLATAENEFRAKKKVLGVLNRDQQRLEGEMKTLQVSLVQHRALYVK
AKENTSYQIKKIEMSKKFLRDKEKYCDKEKQNIKDLEIELYETEKAWREFEKKTKEEILQ
RAADIELRESQLERYKELKEIARRKVATLTQQLEKLQWEQKADQERMKLNRRKKKEVEEN
IKQTVERIEEHKRRIEKLEEYTKLCIESLAEKKRQEETLTEEIKNSTIRMAEVNEELNKI
VGELQNAKIDYHEGKRQQMRAELLESLRRLYPDSVFGRLLDLCQPIHKKYQLAVTKVFSK
YMTAIVVATEKTARDCIRFLKQERAEPETFLALDYLDVKPINEKLREIKGAKMLVDVVQT
PFDPLKKVIQFVSGNGLVCETVKEARQIAFDGPVRLKTVALDGTLFLKSGVISGGSSDLK
FKARCWDDKEMNKMKERRESLINELKDLMKIKRKETDLKHLHAQCHGTQMRLKYSQSELD
LIKKKHLANLYMEKSKLESELVNTESQHDMINEGVLQRELKIKEFQKKINEVEDAVFKEF
CEEIGIENIRVYEQEHVRQQEEIDRRRLEFENQKMRLNVQLEYNRGHLQKLIDTVSKLRE
TIQKDEFEITGLLKDEEKHLKRVNEIVEEEQHLKDTLSAHKSEIMKTQSEVEEFRKKLLT
LNREAAKLQKEGAAIETSLEDKRLRRHNMLLECKVQDLKINLLFGSLDDISEIELGTETE
GTQTTTIYEREEAIKIDYSGLASDLKDLESDEEREAHLNQMQQEMKSKESTLMKTAAPNL
RALEKLQIARDKFQESMDAFETSRKEARISKQEFEQVKKRRYELFSRCFEHASIAIDQIY
KKLCRNGSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAIH
SFRPAPFFILDEIDAALDNTNIDKVSSFIREQAHEQFQMIVISLKEEFYSKADALIGVCP
EHDNGMFSQVLTLDLTEYPDDQEEMENYVHSSL
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggctacctgaagctgctggtgatgaaggacttcaagtcctggcggggggaacaggtc
attggccccttcatgaggttcaactgcatcattgggcccaacggagcaggaaaatctaac
ataatggatgctgttagttttgtgatgtgtgaaaagatatctaacttgcgagttaaaagt
gttcgagaacttattcatggagcgcatgttggaaaaccagtttcttctacagcaagcgta
aagatagtatattgtgaagaagatggggaagaaaaaacattttcaagagttatccgtggt
acttgttctgaatttattttcaatgataaaacagtcacccgatctacttacatatctgag
cttgaaaaaataggcatacttgtcaaagctaggaattgtcttatttttcagggaacagta
gaactgattgcaatgaagaagccaaaggaaagaactcaactttttgaacaaatcagtaat
tcatggcaatatgctgaggaatatgaaagaaaaaagaaaaaaatggagcaagcagaagag
gatgcacactttaattataacaagaaaaaaagtattgcagcagaacgcaaacaagcaaag
atggaaaaagaggaggcagatcgttaccagatgctcatcaaggaaatgcatgaaaacagg
atacagctacagcttttccagctttattacaatgaaaaaaacattgactttatgaaaaaa
aggttggatgaaaagaatatggaggctagtatcaagaaagattctcttgctacagcagaa
aatgaatttagagccaagaaaaaagtgcttggtgtactaaatagagaccaacagcgcttg
gaaggagaaatgaagactcttcaagtgtcactggttcagcatagagccctctatgtaaaa
gcaaaagaaaacacttcctaccaaatcaagaaaatagaaatgtctaaaaaatttctgagg
gacaaggagaaatactgtgataaggaaaagcagaacataaaagacctggagatagaactg
tatgaaactgagaaggcgtggagagaatttgagaagaaaactaaagaggagatattgcag
agagcagcagatattgagctgagagaaagtcagttggagcgctataaagagctaaaggaa
atagcaagaaggaaagtggctacgctaacccagcagctagaaaaacttcagtgggagcaa
aaagcggatcaagaaaggatgaaacttaacaggagaaagaaaaaagaagttgaggaaaac
attaaacagactgtggaacggatagaagagcataaaagacgaatagagaagttggaagag
tacaccaagttatgcattgagtcattggcagagaagaaacgtcaggaagaaacacttact
gaagaaataaaaaactcaacaatacgaatggctgaagtgaatgaagaattgaacaaaata
gttggtgaactgcagaatgccaaaatcgattaccatgaaggaaagcgtcagcaaatgaga
gcagagttgctggaaagtctcagaagactgtatccagattctgtgtttggaagactgctt
gacttgtgccaacctattcataaaaaataccagcttgctgtcaccaaagtgttcagcaaa
tacatgactgctattgttgttgccacggaaaaaacagcaagagattgcatacggttccta
aaacaagaacgagctgaacccgaaacttttcttgctttggattaccttgatgttaagcca
attaatgagaagttaagagagataaaaggagctaaaatgctggtggatgttgtacaaact
ccatttgatccactgaaaaaagtaattcagtttgtgagtgggaatggcttggtctgtgaa
acagttaaagaagcaagacaaatagcatttgatggaccagtgaggttgaaaacggtggcg
cttgatggaactttatttttgaaatctggagtgatttctggaggatcaagcgatttaaaa
ttcaaagccagatgttgggatgataaagaaatgaataaaatgaaagaaagaagagagagc
ttgattaatgagttaaaggacttaatgaaaatcaaacgtaaggagactgatttgaagcac
ttgcatgctcagtgtcatggaactcagatgcgacttaaatattcacaaagtgaattagac
cttattaaaaagaaacatcttgctaatctctacatggagaaatcaaagctggaaagtgaa
ctagtaaatactgagtcccagcatgatatgataaatgaaggagtactacagagagaatta
aaaataaaagaatttcagaagaaaatcaatgaggttgaagatgctgttttcaaggaattc
tgtgaagaaattggcatagaaaacatacgtgtgtatgaacaagaacatgtgagacagcaa
gaggagattgatagaagaagactggagtttgaaaatcagaagatgcgactaaatgttcag
ctggaatataatcgtggtcatctacagaaattaatagacacagtcagcaagctgagggaa
acaattcaaaaagatgaatttgagattactgggctacttaaggatgaggaaaaacatcta
aaaagagtgaacgaaattgtggaggaggagcaacatcttaaggatacattaagtgctcat
aaatctgagattatgaaaacccaaagtgaagttgaagaattcagaaagaagttgttaact
cttaatagggaagctgcaaaattacaaaaggaaggtgcagctatagaaacctcattggaa
gataaaagattaagaaggcataatatgcttcttgagtgcaaggtgcaggacttgaaaata
aatctcctatttggatcactggatgatatcagtgaaatagagctgggaactgaaacggaa
ggcactcagactacaactatctatgagagggaagaggcaattaagatagactacagtggc
ctagcaagtgatctgaaggacctagagtctgatgaagaaagagaggctcatctgaaccaa
atgcagcaggaaatgaaatctaaagagagtactttaatgaagacagctgctccaaacctg
agagcattggagaaattacagatagctcgggacaagttccaagaatcaatggatgctttt
gagaccagcagaaaggaggccagaatatccaaacaagaatttgaacaggtgaagaaaagg
agatacgagctttttagccggtgctttgagcatgcctccatagctattgatcagatctac
aaaaaactttgcaggaacggtagtgctcaggcattccttagtcctgaaaatcccgaggag
ccttacctagaaggcattggctttaactgtgtggctccagggaagcgatttatgccaatg
gacagtttgtcaggaggagaaaaaactgtggcagctctggctcttatatttgctatacac
agttttcggccagcacctttttttattttagatgagatagatgctgccctggataacaca
aacattgataaagtatcaagtttcattagggagcaggcacatgaacagtttcaaatgata
gttatttctctgaaggaagagttttattccaaagcagatgcattgattggagtgtgtcca
gagcatgataatggtatgttcagtcaggtactgactttggatcttaccgagtatccagat
gaccaagaagaaatggagaactatgtacacagttctttataa
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