KEGG   Aythya fuligula (tufted duck): 116488479
Entry
116488479         CDS       T07966                                 
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116488479 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aful03041]
    116488479 (U2AF1)
Spliceosome [BR:aful03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116488479 (U2AF1)
 Complex B
    116488479 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 116488479
NCBI-ProteinID: XP_032041945
UniProt: A0A6J3CUI4
LinkDB
Position
1:complement(115363440..115379810)
AA seq 237 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcctccatcttcggcaccgagaaggacaaagtcaactgttcattt
tatttcaaaattggagcttgtcgtcatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgcagtgagtgatgttgagatgcaggaacattatgatgaa
ttctttgaggaggtcttcacagaaatggaagaaaaatacggcgaggttgaagagatgaac
gtctgtgataaccttggagaccatctagttggaaacgtatacgtaaagtttcgccgtgaa
gaagatgcagaaaaggctgtgattgacctgaacaatcgctggtttaatggacagcccatt
catgctgagctttcacctgtgaccgacttcagagaggcctgttgccgtcaatatgaaatg
ggggagtgtacacgaggaggtttctgcaacttcatgcatttgaagcccatttctcgagag
ttgagacgcgagttgtatgggcgtcgtcgtaaaaagcatagatccaggtcgaggtcccgt
gaacgtcggtctagatccagagatcgtggtcgtggaggtggtggtggtggaggaggagga
cgcgaacgcgataggaggcggtcaagagatcgtgaaagatccggtcgattctga

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