Aythya fuligula (tufted duck): 116488507
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Entry
116488507 CDS
T07966
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03020
RNA polymerase
aful03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116488507 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
116488507 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116488507 (POLR2B)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116488507 (POLR2B)
Enzymes [BR:
aful01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116488507 (POLR2B)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116488507 (POLR2B)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116488507 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
116488507
NCBI-ProteinID:
XP_032041992
UniProt:
A0A6J3CYI3
LinkDB
All DBs
Position
4:12263089..12277731
Genome browser
AA seq
1190 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQVGVGLIRIKEMLPGEQEVMFKWRCFKKHQNNCCFSFLNTQVFIVS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgccgacgaagatatgcagtacgatgaggacgacgatgaaatcaccccggac
ctgtggcaggaggcgtgctggatcgtcattagctcttattttgatgagaagggtttagtc
aggcaacagttggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgcgccaccaattgatttacaagctgaagcccagcatgctacaggagaagtggaagaa
ccaccccgctatctcctgaagtttgaacaaatctatctttccaaacctactcattgggaa
agagacggagcgccatcacctatgatgcccaacgaagccagactgagaaaccttacgtat
tcagcccccttgtatgtggatataactaaaacagttattaaagaaggggaagatcagtta
cagacgcagcatcagaaaacttttatagggaaaattcctattatgttacgatcaacatac
tgtttgttaaatggcctaactgaccgtgatctttgtgaactgaatgaatgccctcttgat
cctggtggctactttatcattaatggatcagaaaaggttctgatcgctcaagaaaaaatg
gctacaaacacagtatatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggttagcatgcta
gccagaggtgggcagggtgcaaagaagagtgctattggtcagcgcattgtagcaactttg
ccatatatcaaacaagaagtgcccatcataatcgtcttccgtgcactcgggtttgtgtct
gacagggatattttagagcacatcatttatgattttgaagatccggaaatgatggaaatg
gtcaaaccttctctggatgaagcatttgtcattcaggagcaaaacgtggctctgaacttc
attggatcgagaggtgcgaagccaggcgtcaccaaagaaaaaagaatcaagtatgctaaa
gaagtcttgcaaaaagaaatgcttccgcatgttggtgtcagtgacttctgtgaaaccaag
aaggcctatttcctggggtatatggttcatcgattgttgctggcagcactgggaaggagg
gagcttgatgacagagatcattacggcaacaaaagactggatcttgctgggccactgcta
gctttcctgttcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaggatttcaacttggaactggccattaaaacgagaattatt
tcagatggtttgaaatattcattggcaactggaaactggggtgatcagaagaaagctcac
caggccagagcaggagtatctcaggtgctaaaccgcctgacctttgcatctacgctttcc
catctgagacgcctgaactctccaattggtagagatggtaaactggcaaagcccagacag
ttgcacaatacgctgtggggaatggtttgccctgctgagactccggagggtcatgcagta
ggacttgtcaagaacttagcccttatggcttacatttctgtggggtctcagccatctccg
attttggaattcttggaagagtggagtatggagaacctggaagaaatatctccagcagca
atagctgatgctaccaagatcttcgttaatggctgctgggtaggaatacacaaagatcca
gagcagcttatgaatacactaaggaagctccgtcgtcagatggatatcattgtatcagag
gtctcaatgattagggatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgccgtccccttctaattgtggaaaaacagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtacaacaattacagctggcaggatctcgtggccagtggt
gtagtagagtacattgatacactggaagaagagactgtgatgctggcaatgactccagat
gatttgcaagaaaaaggcgttgcgtactgttcaacatacacgcactgtgagattcaccca
tccatgatcctgggagtctgtgcatctatcattcctttccctgatcacaaccagtctcct
aggaacacgtaccagtctgctatgggtaaacaggctatgggagtttacattacaaacttc
cacgttcgtatggatacactggcacacgttctatactatcctcagaagccccttgtaaca
acacgctccatggagtacttgcgtttcagagagttaccagcaggtatcaattcaattgta
gccattgcatcgtacacaggatataaccaggaagactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtgttttatcggtcctacaaagagcaggagtccaaa
aaaggatatgaccaagaggaagtttttgagaagcctacacgtgagacttgccaaggtatg
agacatgccatctatgacaaactcgatgatgatggcttaatagcacctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtaacgctaccagaaaacgaagatgaactg
gaaagcactaacagacgcttcacaaagagagactgtagcacttttctgcgaactagtgag
actggtattgtagatcaggtcatggtaacactgaaccaggaaggatacaagttctgcaag
attagggtacgttctgtaagaatcccacaaataggagataaatttgccagcaggcatggt
cagaaaggaacctgtggtatccagtaccggcaagaggatatgcccttcacttgtgaaggc
atcacacctgatataattatcaatccgcatgccatcccttcccggatgaccattggtcac
ttgattgaatgtctgcaggggaaggtgtcggcaaacaagggagaaattggtgatgctaca
ccctttaatgatgctgtcaatgtgcagaagatttccaatcttttatcagattatggttac
catctgagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcacag
atctttattggtcctacatattaccagcggttgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggccaatccagatacttaacagacagcccatggagggcagatctcgt
gacggtggccttcgttttggagaaatggaacgagattgccaaatcgctcatggagcagcc
cagttcttgagagagagattgtttgaagcttcagacccgtatcaagtccacgtatgcaac
ctctgtgggattatggcaatcgcaaacaccaggactcacacctatgaatgccggggatgc
cgcaataaaacgcaggtaggtgtgggcttaatcaggataaaggaaatgctaccaggtgaa
caggaagttatgtttaaatggagatgttttaagaaacaccagaacaattgctgttttagt
ttcctaaatactcaagtgttcatagtgtcctag
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integrated database retrieval system
