Aythya fuligula (tufted duck): 116488521
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Entry
116488521 CDS
T07966
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116488521 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aful03041
]
116488521 (DHX15)
03009 Ribosome biogenesis [BR:
aful03009
]
116488521 (DHX15)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116488521 (DHX15)
Spliceosome [BR:
aful03041
]
Complex A
U2 snRNP components
U2 related factors
116488521 (DHX15)
Complex B
116488521 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116488521 (DHX15)
Ribosome biogenesis [BR:
aful03009
]
Eukaryotic type
90S particles
Helicases
116488521 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Atrophin-1
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
116488521
NCBI-ProteinID:
XP_032042025
UniProt:
A0A6J3CUR6
LinkDB
All DBs
Position
4:58199216..58244453
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSDGKDRDRDRDRDDRKDRDRDRDRDRDRDREREKEKELRAA
SNSTLIAAGLPPMKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRH
QSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHA
FKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKAL
VTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctagacctgggggacgactacagctccagcaagaagcgctcc
gacgggaaagatcgtgaccgggacagagaccgcgatgaccggaaagatcgtgacagggat
cgtgacagagatagagatcgtgacagagaaagggagaaggaaaaggaattgcgagcagca
tctaactctacgctcattgctgctgggttaccacctatgaaaccagcaatgattccacac
agtattaaccctttcacaaatcttccacatacacctcgttactatgacatcctgaaaaaa
cggctacagcttccagtctgggaatataaagaaagatttacagatattttgattaggcat
cagtcatttgtactcgttggagagactgggtctggtaaaacaacacagatcccccagtgg
tgtgttgactacatgcgctcgttacctggaccaaagaggggagtagcatgtacccagcct
aggagagtggccgcaatgagcgtggcgcagcgtgtcgctgatgagatggatgtaatgctg
ggccaggaagttggttactctattcgatttgaagactgcagtagtgcaaaaaccattctg
aagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttgctggagcgc
tatggtgttataattcttgacgaggctcatgagagaaccctggctactgatatcttgatg
ggagttttgaaagaagttgtaagacaaagagctgatttgaaggttatagttatgagtgcc
actttagatgctggcaagtttcagatctactttgataactgccctcttctaaccatcccg
ggtcgcacccatcctgtggagatattctatactccagaaccagaaagggattacctggag
gctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaaggagatcttcta
ctctttcttactggacaggaggagatcgatgaagcctgcaagaggataaaacgtgaaatt
gatgatttaggtcctgaagtgggtgacatcaaaatcattccgttgtactccacccttcct
ccgcagcaacagcaaaggatttttgaacctcctccaccaaaaaaacagaatggagcaata
ggaagaaaggttgttgtatccaccaacattgccgagacatcattaacaatagatggtgtg
gtgtttgtgattgatcctggcttcgcaaaacaaaaggtgtacaatcctcgtatcagagtg
gagtctctcttggtgactgcgattagtaaagcttcagctcagcagagagctggccgtgct
ggtcgtactaggccaggcaagtgcttcaggctttatacagagaaggcttacaaaactgaa
atgcaggacaatacatacccggaaattttgaggtctaacttaggatctgtagtattgcag
ctcaagaagcttggtatagatgatttggtgcacttcgattttatggatcctccagctcct
gaaactctgatgagagccttagagctcttgaattatctggctgctttaaatgatgatgga
gacttgactgaattgggatccatgatggctgaatttccactggacccacagctggcaaaa
atggttattgcaagttgtgactacaactgctctaatgaggtcctatctattactgccatg
ttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagcagatgaagcc
aagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtctaccatgct
ttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaactacaggtcc
ctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggatagatttaatttg
cctcgtagaagcacagactttaccagccgagattattacatcaatataagaaaggcatta
gttactgggtatttcatgcaggtggcgcacttggagcgaacagggcattacctaacagtg
aaagacaaccaagtggtgcagctgcatccttccactgtcctcgaccataaaccagagtgg
gtgctttataatgagtttgtccttacaacgaagaactacatccggacatgtacagacatc
aagccggagtggctggtgaaaattgcccctcaatattatgacatgagcaattttccacag
tgtgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaaggaatactca
cagtactga
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