Aythya fuligula (tufted duck): 116488594
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Entry
116488594 CDS
T07966
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116488594 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116488594 (SMARCA5)
03036 Chromosome and associated proteins [BR:
aful03036
]
116488594 (SMARCA5)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
116488594 (SMARCA5)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
116488594 (SMARCA5)
RSF complex
116488594 (SMARCA5)
WICH complex
116488594 (SMARCA5)
B-WICH complex
116488594 (SMARCA5)
NORC complex
116488594 (SMARCA5)
BRF complex
116488594 (SMARCA5)
NuRF complex (fruit fly)
116488594 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
116488594
NCBI-ProteinID:
XP_032042144
UniProt:
A0A6J3CVJ1
LinkDB
All DBs
Position
4:complement(35596824..35620636)
Genome browser
AA seq
1054 aa
AA seq
DB search
MSAGQQGTTTATTTPPPPPQPDEPPAPPPQPPAPPGAASSEAAGTAPPAAGPAAGDAAME
ESFDDASPGKQKEIQEADPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLK
MKPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGK
LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS
TLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKK
FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF
NSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKM
QREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLV
TNSGKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQ
ASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQT
KTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGAT
HVFASKESEITDEDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY
REKQKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP
RLFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLT
QGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEK
IMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML
HKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKE
KAEKKKRGPKPSSAQKRKMDGTPDGRGRKKKLKL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccggccagcaggggacaacaacagcaacgacaacgccgccgccgccgccgcaa
ccggacgagccgcccgcgccgccgccgcagccgcccgccccgccgggcgccgccagcagc
gaggccgcggggacggctccccccgccgccggcccggccgcaggcgacgcggcgatggag
gaatcttttgatgatgcgtcaccaggaaaacaaaaagaaatccaggaagcagatcctaca
tatgaagagaaaatgcaaacagacagagcaaacagatttgagtatctgttgaagcagact
gagctgtttgctcacttcatccagcctgctgctcagaaaactccaacttcacctttgaaa
atgaaaccaggacgtccacgaataaagaaggatgagaaacagaatttactgtcagttggc
gactaccgacaccgtagaacagaacaggaagaggacgaggagctgttaacagaaagctcc
aagacaacaaatgtctgcactcgatttgaagaatctccatcatatgttaaatggggaaag
ctgcgtgattatcaggtccgaggactgaactggctcatttctttgtatgaaaatggcatc
aatggtatcctagcagatgaaatgggtctcgggaagacactgcaaacaatttctcttctt
ggatatatgaaacactacagaaatattcctggtcctcacatggtgttagttccaaaatcc
actctacataactggatgaatgaatttaagagatgggtacctacacttcgagcagtgtgt
ttgataggtgacaaagaccagcgagctgcctttgtcagagatgtgttgttgccaggagaa
tgggatgtctgcgtaacatcgtatgaaatgcttatcaaagaaaaatcagtattcaagaag
tttaactggagatacctagttatagatgaagcccacaggattaaaaatgaaaaatcaaag
ttatcagaaattgtgagggaattcaagactacaaatcggctgctattaactggaactcca
cttcagaacaacctacatgaactctgggcacttcttaacttccttttgccagatgtcttt
aactcatctgaagattttgattcatggtttgatacaaacaactgtctaggggatcaaaag
ttggtggaacgtctccatatggtgctacgaccgttcctcctacgtcgcattaaagctgat
gtagagaaaagtttgcctccaaagaaggaagttaaaatttatgtgggtctcagcaaaatg
cagcgagaatggtatacaaggatcttaatgaaggatatagatatattgaattctgctgga
aagttggacaaaatgagactgttgaatatccttatgcaactacgaaaatgttgcaatcat
ccatatctctttgatggagcagaacctggtccaccttacacaacagatatgcatttggtc
accaacagtggcaaaatggtagtattggacaaattactgccgaagttgaaagagcaagat
tcaagagtcttaatcttcagccagatgaccagagtcctggacatcttggaagattattgt
atgtggcgaaattatgaatactgtagattggatggacaaacacctcatgatgagagacag
gcttctattaacgcatacaatgaacctggtagctcaaaatttgtattcatgttgagtaca
cgggcaggaggtcttggaatcaatttggctactgctgatgttgtaattctgtatgattca
gactggaatccacaagtagatcttcaggctatggatcgagcacacagaattggccaaaca
aagactgtaagagtgttcagatttatcacggacaatacagtggaagaaagaatagtggaa
cgtgcagaaatgaaactccggctagattccatagtcatccagcaaggaagactggtggat
caaaacttgaataaacttgggaaggatgaaatgctgcaaatgattagacatggagcaaca
catgtgtttgcctcaaaggaaagtgagattacagatgaagatattgatcacattttggaa
agaggtgcaaagaagactgcagaaatgaatgaaaaactttcgaagatgggtgaaagctcc
ctccgaaatttcacaatggatacagagtccagcgtgtataattttgaaggggaggactac
agagaaaaacagaagatggcatttacagagtggattgaaccacctaaacgagaaagaaaa
gccaattatgctgtggatgcttacttcagagaagctcttcgagtcagcgagccaaaagca
cccaaggcaccacggcctccaaagcagccaaatgtacaagactttcagttctttcctcca
cggctctttgaactgttggaaaaagagattctctactacaggaaaacaatcgggtacaag
gtacctcgtaatcctgatctgcccaatgcagcccaagcacaaaaggaagagcagcttaag
attgacgaggctgaacctcttaatgatgaagaactagaagaaaaagagaagcttctaacc
cagggatttactaactggaataagagagattttaaccagttcatcaaagctaatgagaag
tggggccgtgatgatatcgaaaatatagcacgagaagtagaaggaaaaaccccagaggaa
gtcatcgagtattcagctgtgttctgggaaaggtgcaacgaactccaagacattgagaag
atcatggctcagatagaaagaggagaagccagaattcagagacgaattagcataaaaaaa
gcacttgatacaaagattggcagatacaaagcccccttccaccagctaagaatatcatat
ggtaccaataaggggaagaattatactgaagaagaggatcgctttctgatctgtatgctt
cacaagctaggatttgataaggagaacgtctatgatgaattaagacagtgtatccgaaac
tcaccacaattcagatttgactggtttctcaagtccagaactgcaatggagctgcaaagg
agatgcaatactttaatcaccctgattgaaagagaaaacatggaactggaagaaaaggaa
aaggcagaaaagaagaaacgtggaccaaaaccatcttcggcacagaagcgcaaaatggat
ggtactcctgatggtcgtggaagaaaaaagaagctaaagctgtga
DBGET
integrated database retrieval system
