Aythya fuligula (tufted duck): 116488787
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Entry
116488787 CDS
T07966
Symbol
SAMM50
Name
(RefSeq) sorting and assembly machinery component 50 homolog
KO
K07277
outer membrane protein insertion porin family
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116488787 (SAMM50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
aful03029
]
116488787 (SAMM50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aful02000
]
116488787 (SAMM50)
Mitochondrial biogenesis [BR:
aful03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
116488787 (SAMM50)
Transporters [BR:
aful02000
]
Other transporters
Pores ion channels [TC:
1
]
116488787 (SAMM50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
116488787
NCBI-ProteinID:
XP_032042577
UniProt:
A0A6J3D070
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Position
1:complement(73800767..73823237)
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AA seq
456 aa
AA seq
DB search
MSGPDFGALGEEAELVEVEPETKQEILENKDVVVQHVHFDGLGRTKDDIIMYEISDVFKA
KNLIDVMRKSHEAREKLLRLGIFRQVEVLIDTCQGDDALPNGLDVTFEVTELRRLTGSYN
TMVGNNEGSMVLGLKFPNLFGRAEKVTFQFSYGTKETSYGLSFFKPQPGNFERNFSVNLY
KVTGQFPWSSLRETDRGISTELNFPIWKTNHTLKWEGVWRELGCLARTASFSVREESGHS
LKSSLSHAMVIDSRNSTILPKRGALLKINQELAGYTGGDVRFLKEDFEFQLNKQLLWDLV
FSASLWGGMLVPIGDKPSSIADRFYLGGPTSVRGFSMYSIGPQNEGDYLGGDAYWAGGLH
LYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGDGPRAHLQKLAEYIRWSYGAGIVLR
LGNIARLELNYCFPMGVQSGDRICDGVQFGAGIRFL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggccagactttggtgccttgggagaagaagccgagctggttgaagttgaacct
gaaaccaagcaggaaattcttgaaaacaaagatgtggtcgttcagcatgtacacttcgat
ggacttggaaggaccaaagatgacattatcatgtatgaaatctctgatgttttcaaggct
aaaaatctcattgatgtaatgagaaaatcacatgaagctcgtgaaaagttgcttcgtcta
ggaatctttagacaggtagaggttctgattgatacctgtcaaggagatgatgcccttcca
aatggtttagatgtaacctttgaggtaacagaattaagaagactaactggaagctataac
actatggttggcaacaatgaaggcagtatggtacttgggctcaagttccccaatctcttt
ggacgtgcagaaaaggtaaccttccagttctcatatggaacaaaggaaacttcatatggc
ctgtcattcttcaaaccacagcctggaaactttgaaagaaatttttcagttaacctgtat
aaagtaactggacagttcccttggagctctcttcgtgaaactgatagaggaatatcaaca
gaacttaattttccaatctggaagaccaatcacacattgaagtgggagggtgtgtggaga
gagcttggctgccttgctagaacagcgtccttctccgttcgagaagaaagtggacattct
cttaaatcttccctctctcatgccatggtaattgattcccggaactctacaatcttgcca
aaacgaggtgctttgctgaaaattaatcaggagctagctggctatacaggtggagacgtg
agatttctgaaagaggattttgaatttcagttgaataagcagcttctctgggatttggtg
ttttcggcatccctttggggtggaatgctagtacctattggagacaagccatccagtata
gctgataggttttaccttggtggaccaacaagtgtgcgaggattcagtatgtacagcatt
ggaccccagaatgaaggtgattacttgggaggagatgcctactgggctggaggcttgcat
ctgtacactcctctacctttccggccaggtcgaggaggttttggagaccttttccgaaca
catttcttcctcaatgctggaaatctctgcaatcttaactatggtgatggtcccagagct
cacctgcagaagctggcagagtatatccgatggtcttacggtgccggaatagttctccga
cttggaaacattgctagattggaacttaattactgtttccccatgggagtacagtctggt
gacaggatatgtgatggtgttcagtttggagcaggaatcagatttctataa
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