Aythya fuligula (tufted duck): 116488963
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Entry
116488963 CDS
T07966
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116488963 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116488963 (CNOT6L)
Enzymes [BR:
aful01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
116488963 (CNOT6L)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116488963 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116488963 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
116488963
NCBI-ProteinID:
XP_032042860
UniProt:
A0A6J3CX57
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All DBs
Position
4:complement(15867082..15896808)
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AA seq
549 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASIKSLHVDKQLLIVANAHMHWDPE
YSDVKLIQTMMFVSELKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNG
IVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKG
VIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPLLPLV
NGVHLPNRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctcccgatcctcgcaggatttacaccatcatgtcagca
gaagaggtagccaatgggaagaagtctcactgggccgaattagagatctcgggtagagtg
cggagcttaagtacgtcgctttggtcgctgacgcacttgactgctctacacctcaatgac
aacaatctgactcgcattccacctgatattgccaagcttcataatctggtttacctggat
ctgtcatccaacaaactcagaagtttaccagcagaactaggaaacatggtatctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctcttc
cagctacaaaccctaggtttgaaaggcaatcctttatcacaagatattctcagcctctac
caggatccagacggaactcgaaagctactgaactacatgcttgacaatctagcagttcat
ccagagcagctgcctccaaggccatggattactttaaaagaacgagaccaaattctgccc
tcagcttcattcacagttatgtgctacaatgtgttgtgtgataagtacgccactcggcag
ctctatggctactgcccgtcttgggcgctgaactgggagtatagaaaaaagggaatcatg
gaagaaatcgtcaactgtgatgcagatatcattagtcttcaggaagtggaaacagagcaa
tacttcaccctttttctgccagcattgaaagaacgaggatatgacggattcttttctcca
aagtcacgtgccaaaatcatgtctgagcaggagaaaaagcatgtggatggctgtgcaata
ttcttcaaaactgagaagtttacgctggtgcagaagcacaccgtggagttcaaccaggtg
gcgatggccaactcggaaggttcggaagcgatgttaaacagagtgatgacgaaggacaac
atcggagttgctgtggtgttagaggtgcataaggaattatttggagcaagtataaaatct
cttcatgtggacaaacagctgcttattgtggccaatgcccacatgcactgggaccctgaa
tactcggatgtgaaactcattcagactatgatgtttgtctcagaactgaaaaatatcctt
gagaaagcctcaagcaggcctggtagcccaacagcagatcccaattctatcccactggtg
ctgtgtgcagatcttaactcattgcctgattcaggtgtagtggaatacttaagcaatggc
atagtagctgacaaccacaaggacttcaaggagttgcgttacaacgagtgtctcatgaac
ttcagcggcaatgggaaaaacggggcttctgaaggaagaattacacatggcttccaactc
aagagcgcctatgaaaacaacttgatgccttacaccaattacacttttgatttcaaaggt
gtgattgactacattttctattccaacactcacatgaacgtgcttggtgtcctggggcct
ttggaccctcagtggctggttgagaacaacatcactgggtgtccacaccctcacatccct
tcagaccacttctcactgttaacacaactcgaactccatcctccgctcctgcctcttgtc
aacggtgtgcacttgccgaacaggaggtag
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