Aythya fuligula (tufted duck): 116489182
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Entry
116489182 CDS
T07966
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03030
DNA replication
aful03410
Base excision repair
aful03420
Nucleotide excision repair
aful03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116489182 (RFC1)
03410 Base excision repair
116489182 (RFC1)
03420 Nucleotide excision repair
116489182 (RFC1)
03430 Mismatch repair
116489182 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aful03032
]
116489182 (RFC1)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116489182 (RFC1)
DNA replication proteins [BR:
aful03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116489182 (RFC1)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116489182 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
Rad17
AAA_22
BRCT_2
AAA_30
AAA_5
RNA_helicase
AAA_17
RuvB_N
TIP49
AAA_16
AAA_18
nSTAND3
AAA_33
AAA_7
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
116489182
NCBI-ProteinID:
XP_032043267
UniProt:
A0A6J3D235
LinkDB
All DBs
Position
4:53076524..53115707
Genome browser
AA seq
1145 aa
AA seq
DB search
MDIRKFFGVVPPGKRQECENVKKSDKIKNGEGDSSGKKRGKETKVKNSPSEDVPKQKQTN
KKKRIIYDSDSEEEVQSVKKSKKPSEKKAATSKLGKVLKQHPVVYVSETDDDDDFVNKRI
SLKPKENGASAISCPGSTTVKKEDVKPRAKPKPLSPVKLTPTSALDYFGTSSVQRSEKKL
VASKRKEPSQSRDSTVDDEAIARQLQLEEDSELERQLHEDEEFAKTLAMLDETPQKKKAR
RDSEEQTVLSIKSSPNMTEGCKQSQRVKATNSAGEAKQTKSENSKGSHLPPQSTDSKLAE
KSTDKTLPLKPTSKLVALKRKEEIAEKERGTQSSVSKEKPQGKEEKKTPKKEKISPKKAE
SVSPEDSEKKRNNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASALGTKIIDEDGLFDLVRTMPGK
KSKYELAAESEAKKTESRHKKTPQKTEAGRKSFSPLKREADTKRRNSTPEKGATFKSAKK
ETAAVRKLTDFKQQAVEKKEVPEPKGNLVSEINENGTERLLWVDKYKPTSLKAIIGQQGE
QSCANKLLRWLRNWHKNTSEDGQAKASKLGGKDDGISSKAALLSGPPGVGKTTTAALVCK
ELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMDEVDGMAG
NEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIKGAMMSI
AFKEGLKIPPPAMHEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDIKLG
PFDVVRKVFAAGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGDLKKHLML
LSRAADSICDGDLVDRQIRSKQNWNLLPTQAIYSSVLPGELMRGYMSQFPVFPSWLGKFS
STGKHERIVQELAMHMSLRTQMCKRTVNMEYLSYLRDALVQPLKDFGADGVQQAITFMDS
YCLMKEDVENIMEISMWGGKPSPFSKLDSKVKAAFTRAYNKEAHLTPYSLNSVKASKRQS
TSMATSELSEDLNVDETQSDEDEQDSVESDAMIKQKKAKSSKPPKREKNEEPTKKEGKRK
EKTRH
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattctttggcgttgtaccccctgggaagcgacaagaatgcgagaat
gtgaaaaagagtgacaaaataaaaaatggggaaggagactcgagtgggaaaaagagggga
aaagagactaaggtgaagaattcacccagtgaagatgttcccaaacaaaagcagacaaac
aagaaaaaaagaataatctatgattcagattcagaagaggaggtgcagtcagtgaaaaag
tccaagaagccatcagagaaaaaagcagccacttcaaaacttggtaaagttctaaagcag
catcctgttgtttatgtttcagagacagatgatgatgatgactttgtcaataagagaatt
tccctgaaaccaaaggagaatggggcatcagccatcagttgcccaggatcaacgacagtg
aaaaaggaagatgtaaaaccacgagctaaacccaagccattatctccagtgaagctgact
cccacctcagctctcgattactttgggacaagtagtgtccagcgatcagaaaagaaactg
gtagcaagtaaaaggaaggaaccctcacaaagcagggacagcacagtggacgatgaagcc
attgctaggcaactgcagcttgaagaagattcagagctggagagacagttgcatgaagat
gaagaatttgcgaagactttggccatgttggatgaaacaccacagaagaaaaaggctcgg
agggattcagaagagcagacagtactgagcatcaagagcagtcctaacatgacagaggga
tgcaagcaatctcagagagtgaaagcaacaaactctgcaggtgaagcaaaacaaactaaa
tctgaaaactcaaaagggtcccatttacccccacaatcaactgatagtaaactagcagaa
aagtcaactgataagaccttgcctttgaagcctacctctaagcttgtggctctgaaacga
aaagaagagattgctgaaaaggaaagaggcactcaaagttcagtatcaaaagaaaaacct
cagggaaaagaagagaagaaaacaccaaagaaggagaaaatttctcccaagaaggctgag
tctgtaagtcctgaggactctgaaaagaagcgaaacaattatcaagcctaccgaagcttc
cttaatcgcgagggtccaaaagctctgggttccaaagagatacctcaaggagctgaaaac
tgcttggaaggcctgacattcgtaattacaggagttctggagtctattgaaagagatgag
gccaaatctctgattgaacgttatggaggaaaagtaactgggaatgtcagcaagaagaca
aactacctggttatgggacgagactgtggccaatctaaatgtgaaaaggcatctgcttta
gggacaaaaattattgatgaagatggcctatttgatcttgttcgaacaatgccaggcaag
aagtccaaatacgagctggcagctgaatcagaggcaaagaaaacagagtcgagacataaa
aagacaccacagaaaactgaagctggcagaaagagttttagccccctcaaaagggaagct
gatactaaaagaagaaattctactcctgagaagggagctaccttcaaatctgctaagaaa
gaaactgctgctgttcgaaagcttacagactttaaacagcaagcagtggagaagaaagaa
gtcccagaacctaaggggaacttggtctctgagattaatgaaaacggaaccgagagattg
ctatgggtggataaatacaagcccacatctctcaaggcaatcattggacagcagggtgag
caaagctgtgccaacaaacttctccgatggctccgaaactggcacaagaacacctcagaa
gatggacaagcaaaggccagcaaacttggaggcaaagatgatggtattagctctaaggca
gcattactttctggtccacctggagttggtaaaaccactacagctgctttagtttgtaag
gaactggggtatagctacgtggagctgaatgccagtgacactcggagtaagaacagtcta
aaggaagtagttgctgaatcacttaataacaccagcatcaaagacttctgttctggcaca
tcctcatcagttagcgggaaacacgtattgatcatggatgaagtggatggtatggcaggc
aatgaagacagaggagggattcaggagttgattggtttgattaaacacacaaaaataccc
atcatctgcatgtgtaatgatcgaaaccatcctaaaattcgttccttggtccactactgt
tttgatcttcgttttcagagacctcgtctagagcagattaagggtgccatgatgtctatt
gcatttaaagaaggcttaaaaattccaccacctgctatgcatgagataatcctggcagca
aatcaagacatcagacaggttttacataatcttaatatgtggtgtgcgaaagataaatca
ttgacttatgatgaggccaaaacagatgccagcagagctaagaaggatatcaaactgggt
ccttttgacgttgtccggaaggtttttgctgctggagaggaggcttcccgtatgtctctc
atagacaaatctgaccttttcttccatgactattccctagcacctctttttgtccaagag
aactatgtacatgtgaaaccagcagctgctgggggagatctgaaaaagcacttgatgctc
ttgagtagggcagctgatagtatatgtgacggtgatctagtggacagacagattcgtagc
aagcaaaactggaaccttctaccaacacaggctatttattcgagtgttctccccggggag
ctgatgagaggttacatgtcccagtttcctgtctttcccagctggctggggaaattttca
tcaacaggcaaacatgagcgtattgtccaagaactggcaatgcacatgagtctcagaacg
cagatgtgcaagaggacagtaaacatggagtacctgtcttatctgcgggatgcacttgtc
cagcctttgaaagactttggagcagatggcgtacaacaagctataaccttcatggactct
tactgcctgatgaaagaagatgttgaaaatatcatggaaataagcatgtggggaggcaaa
cccagtcctttttcaaagctggattccaaggtcaaagccgcttttacgcgtgcctacaac
aaagaggcacatctgactccgtattccctgaattctgtgaaggcatctaaaaggcagtca
acatccatggcaacctctgaactgagtgaggacctgaatgtggatgagacccagtctgat
gaggatgagcaagacagtgttgaaagcgatgcaatgattaagcaaaagaaggcgaagtct
tccaagcctccaaaaagagagaaaaacgaagaaccaacaaaaaaagaagggaaaaggaag
gagaaaacaagacattaa
DBGET
integrated database retrieval system
