Aythya fuligula (tufted duck): 116489192
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Entry
116489192 CDS
T07966
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116489192 (LRBA)
Membrane trafficking [BR:
aful04131
]
Endosome - Lysosome transport
Others
Others
116489192 (LRBA)
Endosome - Golgi transport
116489192 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116489192 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
116489192
NCBI-ProteinID:
XP_032043281
UniProt:
A0A6J3CW41
LinkDB
All DBs
Position
4:32883398..33281700
Genome browser
AA seq
2847 aa
AA seq
DB search
MASGEKQVVRPTGDGGGGGAGREGNGAEGGSVLQPLNPGVPIRGIRMKFAVLTGLVEVGE
VSNRDILETTFNLLVGGDFDLEMNFIIQEKDGITCMVELLDKCDVTCQAEVWSMFTAILK
KSIRNLQACTEVGLVEQVLKRIDRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGE
KGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAF
MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPL
FAQLDYRQYSSDHVDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGYSLEKSSKAH
VTRAVLELCLAFSKYLSNLQNGVPLLKQLCDHVLLNPAIWIHIPAQVQLILYTYLSTEFI
GTVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGVDGPRPTQKEILSLRAFLL
MFVKQLVMKDYGIKEEELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRN
GLQVVYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTSLI
TMTTYNVLFEILTEQICTQVIHKQHPDPDSAVKIQNPQILKVIAILLRNSPQTPETLEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLY
HAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQEKGGEESAIGPSAPIRTIS
GISKGAEIARKQQCLEIKEAAAAAAPSFQDDMESTTEKSESDGDLQTHSASEQTTEEDRE
TEQDLKAMPSSEFSPEPEAINPSVSEISSGLAEAIEDSLSKPRELTEETVAASLEIETTS
EGETRASPEGVEKLTVEMEDEDDFVDLKEESSVTLPSEEFAETDKKHSSNENQVTKQEEV
TEKQSESVLLKPQDNVGMNGKKEELALSETANSAAQEVATQLDSEGKKKLEEKTVPSEKS
AEKGNAHAAEPAGASEKRIAKLDVSSVASDTERLELRASTCLEAPLPARSIPESSRQQDS
SGQELAATSDGQRRDSRSTVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHSTKTVMD
FVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENIEPTQGLSVEAS
LTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAVAVRNCLECQQHAQ
MKPVGDLAKNQKTMQGFTGTGKSTAKSPVDIVTGGISPIRDHDRLLQDMDINRLRAVVFR
DIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPPNHSQSFKESENENNGTPATD
VENPSASLTASTSASTEVSESTASLRRRDSGLGEEPTSGQTNSSVGGVEAGPLNVSAGPD
AISEVLSTLSLEVNKSQEGRNETEAEDSKPATSVPAAKNVNVKDILRSLVSTPGDGTGVD
PALLPPAFLGVLGDGGAEHHVQFHSFDRSVVVPPKKSTISSSTSAMGIPANAVSVVSSLD
SAQALDLSGESPGRGSSNSKLPSVPTVSSVPGDSASNMSITDRLEHALEKAAPLLREIFV
DFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIE
LVNEGRLMSQTMKDHLVRVANEAEFILNRQRAEDINRHAEFESLCAQYSADKREEEKMCH
HLITAAKYRDQVTATQLIQKIINILTDKHGAWGSSVSSRPREFWRLDYWEDDLRRRRRFV
RNPLGSTHPEATLKAAGEHAPDEDILVKGKQSIKSQVLGNQNSESEILLEGDDDITSFIE
EREVENLTGPVALSAPAQLVAPSVVVKGTLSITHSELYFEVDEEDPSFKKIDPKILAYTE
GLHGKWLFSEIRAIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKKVVNCLPRVGIGA
TFGLPQTRRISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTYNDLNQYPVFP
WVITNYESDELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTHYST
ASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYL
PEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSCQLHQWIDLI
FGYKQQGPEAARSLNVFYYLTYEGAVNLSSITDPVLREAVEAQIRSFGQTPSQLLIEPHP
PRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLTNPAVITVTAN
RLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVHSQCFV
ITSDNRYILVCGFWDKSFRVYSTDSGRLIQVIFGHWDVVTCLARSESYIGGNCYILSGSR
DATLLLWYWNGKTNIIGDNPRGDIATPRAILTGHDYEITCATICAELGLVISGSKEGPCL
IHSMNGDLLRTLEGPETLEGPENCLRPKLIQASREGQCVIYYENGLFCVFSVNGRLQATM
ETDDKIKAIQLSRDGQYLLTGGDNGVVMVWQMWDLKQLFAYPGCDAGIRSMALSYDQRCI
LTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8544 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggagagaagcaagttgtgcggccaacaggtgatggtggaggaggaggagcg
gggagagaaggaaacggcgctgaagggggaagtgtgctgcagccgctcaacccaggagtc
cccatccgaggcatccggatgaaattcgccgtgctgacggggctggtggaagtcggcgag
gtgtccaacagggacatactcgaaacgacgtttaatctgcttgttgggggcgattttgac
ctggaaatgaactttattattcaagaaaaagatggcattacctgcatggtagaactgttg
gataaatgcgacgtcacctgccaggccgaggtgtggagcatgttcacagcaatcctgaag
aaaagtatacgcaatctacaggcatgcacggaagtggggctggttgaacaagtactcaag
aggattgatagagctgacaacatgattgcagatctcttagtggatatgctgggtgtgttg
gctagctataacttgacggttcgagagctcaagttattcttcagcaaacttcaaggagaa
aaagggagatggccaccacacgctgggaagttgttgtctgtgttaaaacacatgcctcag
aaatacggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgcctta
cctcctatagccaagtggccctaccagaatggatttacttttcacacttggttaagaatg
gatcctgtaaataatataaatgtggacaaggataagccttacttatattgttttcgaacg
aacaaaggacttggctattctgctcactttgttggaggctgcttgattgtaacatccatc
aaatcaaagggaaaaggttttcagcattgtgttaaatttgatttcaagccacaaaagtgg
tatatggttactattgtgcacatctataaccgctggaagaatagtgaacttcgatgttat
gtgaatggggaactggcatcctatggagaaataacatggtttgtcaacaccagtgataca
tttgacaaatgtttcctgggctcttcagaaacagcagatgccaatcgagtgttctgtgga
caaatgacatctgtttaccttttcagtgaggctctcaatgctgctcagatctttgccatt
tatcagcttggtctgggatataagggaacatttaaattcaaggcagaaagtgatctcttc
cttgatgaacatcacaaattgttgctgtatgatggcaaactctccagtgctattgctttt
atgtacaatccaagggctacagatgcacagctctgtctagagtcatcccctaaggataac
ccttctatttttgttcattcaccacatgcactcatgctgcaggatgtgaaagcagtctta
acacattctatccaaagtgccctgcactctattggaggagtgcaggtacttttccctctc
tttgcacaattggactacaggcaatattcatcagaccacgtagacacaactgtttgttct
acgttactggctttcatcatggagttgttgaagaactccattgctatgcaagaacagatg
ctttcctgtaagggcttccttgtgataggatatagtctggaaaagtcttccaaagcccat
gttacacgagccgtactggagttatgccttgccttttcaaaatacctgagcaacttacaa
aatggggtgcccttgctgaaacagctgtgcgatcatgttctccttaatcctgcaatatgg
attcatatcccagcacaggttcagctgatcctgtatacttacttatctacggagttcatt
ggcactgttaatatctatggtgcaatccggagggttgggaccgttcttttggtcatgcat
accctgaagtattattactgggtagtgaatcctcaggatcgcagtggtataactcccaag
ggcgtagatgggccacggcctactcaaaaagaaattttatctttgcgagcattcttgttg
atgtttgttaaacagctagtgatgaaggactatggaataaaagaagaagaattgcaggca
atcctcaattatctactcactatccatgaggatgacaatctaatggatgtcttgcagttg
cttgttgctctgatgtcagagcatccaagttctatgatccctgcttttgatcagaggaat
ggattacaggttgtctacaagcttctagcatcaaaaagtgaaggcatcagggtgcaagct
ctgaaagtgatgggatatttcttaaagcatcttgctccaaagagaaaagctgaagtcatg
cttggacatggattgttctctttgttggctgaaaggctgatgcttcagacaagcttaatc
accatgaccacatacaatgtcctatttgagattctgactgaacagatttgcacacaagtg
atacataaacaacatcctgacccagattcagcagtgaagatacaaaatcctcagattttg
aaggttattgcaatcctgctacgtaattctccacagacaccagaaactctggaggttcgg
cgagcatttctctcagatatgattaaactttttaataacagcagagaaaataggaggagt
ttgttgcagtgctctgtctggcaggagtggatgctttctctttgctgttttaatcctaag
acttctgaggaacagaagataactgagatggtgtataccatatttcgaattcttctctac
catgcaatcaaatatgagtggggtggctggcgtgtttgggtggatacgctgtctattaca
cattcaaaggtaacatttgaaatgcacaaagagagtctttctcaaatgtacagggaatac
caagaaaaaggaggtgaagagagtgcaataggtccttctgctccaataagaacaatttct
ggaattagcaaaggagcagaaatcgcaagaaagcaacagtgtttggagataaaagaagct
gctgctgctgcggctccttctttccaggatgatatggagtccactactgaaaaaagtgag
tctgatggtgacctgcaaacacattcagcgtctgaacagacaacggaggaagacagggag
actgaacaggatttaaaagcaatgcctagttcagaattttctccagagccagaagcaata
aaccccagtgtttcagaaattagtagtggactagctgaagcaattgaagattctctgagc
aaacctcgggaacttacagaagaaacagtagctgcttcattggaaatagaaactacttcg
gaaggagaaactcgtgcaagtccagagggagtggaaaaattaacagtagagatggaggat
gaggatgactttgttgatttgaaagaggaaagcagtgtgactctaccttcagaagaattt
gcagaaacagacaaaaagcatagctccaatgaaaatcaagtgacaaagcaggaagaagtg
acagagaagcaatctgaatctgtgcttttaaaacctcaggataatgttggcatgaatggg
aaaaaagaagaactggcattatcagaaacagcaaattctgcagctcaggaagtagcgact
caactggattcagaagggaaaaagaaactggaagaaaagactgttcctagtgaaaaatca
gctgaaaaaggaaatgcacatgcagcagagcctgctggagcatctgaaaaaagaattgct
aagctggatgtttctagtgttgcatcagatacagaaagactggaactgagagccagcaca
tgcctagaagcacctctgcccgccaggtccatacctgagagctcaagacagcaagattct
tcaggacaagagctagctgctacatcagatggacagagaagagactctaggtcaactgtg
ttccgtattcctgagtttaagtggtcactgatgcatcagcgcttgctcacagacttgctc
ttttccattgaaacagatatacagatgtggagaagccattctacaaaaactgtgatggac
tttgtgaatagcagtgacaatgtcatatttgtacacaacacaattcacctcatctctcaa
gtgatggacaacatgatcatggcttgtggcggtatattgccattgctgtctgctgccaca
tcggctactcatgaattggagaatattgagccgactcaaggactttcagtagaagcatct
ttaacatttctccagagattaatcaaccttgtggatgtgttaatttttgcaagctctctt
ggtttcactgaaattgaatctgagaaaaatatgtcatctggaggaattttgcgacaatgt
cttcgtctagtatgtgcagtagcagtaagaaattgcttggagtgtcaacagcatgcacag
atgaagcctgttggagaccttgcgaagaaccaaaaaacaatgcagggctttacaggaaca
ggaaaatccacagcaaagagtccagtggacattgtgactggtggaatttctccaatacga
gaccatgacagacttctgcaggacatggatattaatagacttcgagcagtagttttcaga
gatatagaggatagtaaacaggctcagttcttggctttggctgttgtatatttcatttct
gtgctcatggtttcaaaatacagagatattctggaaccccagaatgaaagaagaccaccg
aaccatagccagtcgttcaaggaatcagagaatgaaaataatggaactcctgctacagat
gtggaaaacccatctgcttctctcactgcttcaacttcagcctccactgaagtttcagaa
agtacagcatctttacgaagaagggactctggtcttggggaggaaccaacttcagggcaa
acaaacagttcagttggtggtgttgaagcaggacctctgaatgtcagtgcaggtccagat
gctatcagtgaagtacttagcactctctcattagaagtaaataagtctcaagagggaaga
aatgagacagaagctgaagatagtaagcccgcaacttctgtgccagctgcaaaaaatgtt
aatgtaaaagacatcctgagaagcttggtaagcacaccaggtgatgggacaggagtggat
cctgctcttctgccaccagccttccttggagtacttggtgatggaggtgctgagcatcat
gtgcagttccattcctttgacaggagtgttgttgtaccaccgaagaaatcaaccatttcc
tcttctacatctgctatgggtattcctgcaaatgctgtcagtgtggtttcttctttggat
tcagcccaagccctagatttgtcaggagaatctcctggaaggggatcatctaattcgaaa
ttgccatctgtccctacagtttcttcagtgccaggggattctgcttcaaatatgagtatt
acagacaggcttgaacatgctttggaaaaagctgcaccacttctgagagagatttttgtg
gattttgctccctttctttctcggactcttttgggtagtcatgggcaggagttgctgata
gaaggtacaagtctcgtgtgtatgaaatctagcagttcagtcgtggagctagtgatgctt
ctttgctctcaggagtggcaaaactcaatacaaaagaatgctggccttgcctttatagag
cttgttaatgaaggaaggttgatgagtcaaactatgaaggaccatttggtcagagtggct
aacgaagcagaatttatcttgaacaggcagagagcagaggatattaaccggcatgctgaa
tttgagtcactgtgtgcccagtattctgctgacaaacgggaagaagaaaaaatgtgtcat
catttgataacagcagctaagtaccgagaccaagtgactgcaactcaactaatacagaaa
attatcaacatcctaacagacaagcatggagcctggggaagttctgtgtcgagtcgtcct
cgtgagttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtg
cgtaacccccttggatcgacacatcctgaagcgacactaaaagcagccggagaacatgct
cctgatgaagatatacttgttaaaggaaagcagtccatcaagagtcaagtcttaggaaat
cagaactcagaaagtgagattctcttggaaggcgatgacgatatcacgtcattcatagag
gagagagaagtggagaacttaacgggaccagttgccctaagcgcaccagcccagcttgtg
gcaccctcagtggtagtgaaaggcactctttccatcactcattctgagctctactttgag
gtggatgaagaagatcccagttttaagaaaatcgacccgaagattctggcatatacagaa
ggactccatggaaaatggctcttttcagagattcgagctatcttttctcgacgttacctt
ctgcaaaatacagcactggagatattcatggcaaatagagttggtgtcatgttcaacttc
cctgaccaagcaacagtaaagaaagtggttaattgtcttcctcgagtcggtattggtgct
acctttggattaccccagaccaggcgcatatctttggctagtccacgacagattttcaaa
gcttcgaatatgacccagcgatggcaacaccgagaaatttccaactttgaatacctgatg
tttctaaacactatagcaggtcgcacttacaatgatttaaatcagtaccctgtcttccct
tgggttatcaccaactatgaatcggatgagttggaccttacacttcctagcaacttcaga
gatttgtcaaagcctattggagctttgaacccaaagagagcggcattctttgctgagaga
tacgaatcatgggaagatgatcaggttccaaagtttcactatggcacacattattcaact
gcaagttttgcactcacgtggttattaagaattgaaccctttacaacactgttcctaaat
ctgcaaggtggaaagtttgatcatgcagatagaaccttttcatctatttcaagagcatgg
cgcaacagtcagcgtgacacttctgatatcaaggaattgattcctgaattctattacctc
ccagagatattcgtcaacagcaacaattacaatctaggagtgatggatgatggaacagtt
gtgtctgatgttgaacttccaccatgggccaaaaccccagaagaatttgttcgcataaac
agactggcgttagaaagtgagtttgtttcctgccagctccatcagtggattgatctgatt
tttggctacaaacagcaagggccagaggctgctaggtccctgaatgtattctactatttg
acttatgaaggagctgttaatttaagttcaataacagatcctgttttgagagaggctgtt
gaagctcaaatacgaagttttggacagaccccttcccaactgctcatagaaccacatcct
ccaagaagttctgccatgcaggtgtatctcctcctgcagagtccattgatgttcacagac
caagctcaacaggatgttatcatggttctaaagttcccatccaactcccctgttactcat
gtagcagccaacacccagccaggtctgaccaaccctgctgtgatcacagttactgcaaat
aggctatttgctgtaaacaagtggcataatcttcccgctcatcaaggtgctgtacaagac
cagccttaccagctgccagtggaaatcgatcctctcatagccagcaatacaggtatgcac
agaaggcaaatcactgatcttttagaccaaagcattcaggtacattcccagtgttttgtc
atcacctctgataatcgttacatcttggtctgtggcttctgggacaagagtttccgagtc
tattctaccgactcagggagactgatacaagtaatatttggccactgggatgttgtaacc
tgtcttgctcgttctgaatcctatattggaggaaattgttatattctgtcaggatcacgt
gatgcaacactgctgctttggtactggaatggcaaaactaacatcattggtgataatcca
agaggtgatattgcaactcctcgagctattttgacaggacacgactatgagatcacctgt
gctaccatttgtgctgaacttggtttggtaataagtggttcaaaagaaggaccatgtctc
atacattctatgaatggagatctgctgaggacattagaaggtcctgaaacattagaaggt
cctgaaaattgcctgagaccaaaacttattcaggcttcaagagaaggccaatgtgtaata
tattatgaaaatggcctcttctgtgtattcagcgtgaatgggagacttcaagccactatg
gaaacagatgacaagatcaaggcaatccagctgagtcgagatggacagtacctgcttaca
ggtggagacaacggcgttgtcatggtatggcagatgtgggacctcaagcagctttttgct
tacccagggtgtgatgctggaatccgatccatggccctgtcatatgaccaaaggtgtata
ctgactggcatggcatctgggagcatagtggttttctacaatgatttcaatcgttggcat
catgaatatcaaacccgatactga
DBGET
integrated database retrieval system
