KEGG   Aythya fuligula (tufted duck): 116489232
Entry
116489232         CDS       T07966                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
aful  Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:aful00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aful03400]
    116489232 (HELQ)
Enzymes [BR:aful01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     116489232 (HELQ)
DNA repair and recombination proteins [BR:aful03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    116489232 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DUF7898 DNA_pol_lambd_f DGKD_4H SBE2_N Cdd1 DUF3135 HTH_41
Other DBs
NCBI-GeneID: 116489232
NCBI-ProteinID: XP_032043335
UniProt: A0A6J3CYJ8
LinkDB
Position
4:44734696..44748684
AA seq 1050 aa
MAEPPLAVRRRSRLGAARKRSRPPAGPSAACSPLPVKRASVGGEGTPAQSPQCDDSEEDM
FGDYSGFGEDDSLLAQALAAEPAHPQDAEAAAGVEPESLRSGTDQREHENDSASETGGTR
AGDTERGVQTPASDPPGASEELADSLFDELPSSQLLYFAEMRQPSAGSDISAGTEKVDVS
KSSSSDKIRSTSSPCPGSEHKNRSTGFSSDLKSDSCKNTSLKDHLKNALTENAKAQTVKV
SKTKQLKEAILSEEICVARKAIGSSSVDIGPFYGLPSKVKDLLRQLRGIETLYEWQHDCL
TLECLQQRKNLIYSLPTSGGKTLVAEILILQELLCMQKDVLMILPYVAIVQEKVWGLSSF
GIELGFLVEEYAGSKGRFPPIKRRCKKSLYIATIEKGHMLVNSLIETDQIGDLGLVVVDE
LHMLGEGSRGATLEMTLAKILYTSKSTHIVGMSATLNNVGDLQKFLRAEYYTKNFRPVEL
KEYIKIRDTIYEVDSKAENGFTFSRLLNFKYSSNLKKADPDHIIALVTEVIPKYSCLIFC
PTKKNCENVASMVCKYLNKEFRSHREKEKQDLIKDLKNIGNGSICPVLKQTIPFGVAYHH
SGLTNDERKSIEEAYSRGVLCLLACTATLAAGVNLPARRVILRAPYVASDFLKKNQYQQM
IGRAGRAGIDNAGESILIVQEKDKHLVQDLVTSPLENCYSNLLPEFTKGMQNLLLSLVGL
KIAVTQEEVYDFLCHTLLGVQQQLLSKEKSLAELVKDGLESLIEKGLLRVKIMEKDQNSK
ITLAITQLGKAAYKGSIDLSYCNLLYKELKKGLEGLVLESSLHLLYLATPYDMVSNCSPD
WMIYLRQFNQLSAAEQTVADMVGVPESFIAKKASGQAIRKSVDSASVNRLYLTFILYTLL
KETNIWSVSEKFNLSRGYVQNLLNSAASFASCVLHFCEQELEEFWVYKALLTELIKHLTY
CVKTELIPLMEVAGVLEARANQLYNAGYKTLAHLANANPETLVKTIEHLSRRQAKQIVSS
AKMLLTEKAEALQEEVELLLKVPTDIPGTS
NT seq 3153 nt   +upstreamnt  +downstreamnt
atggccgagccgccgctcgccgtgcggaggaggagccgcctcggcgccgctcgcaaacgg
agccggcccccggcggggcccagcgccgcctgctcgccgctgcctgtcaagagagcgagt
gtcgggggcgaggggaccccagcgcagagcccgcagtgcgatgacagcgaggaggacatg
ttcggggactacagcggcttcggtgaggatgactcgctgctggcccaagctctcgccgcg
gagcccgcgcacccgcaggatgccgaggcagctgcaggggtcgagcccgagagtcttcgg
tcgggaaccgaccagagagagcacgagaatgattccgcttcagaaacggggggcacacgt
gcaggggatacggagcggggcgtccaaacgcctgcgagtgacccgccgggtgccagcgag
gagctggctgattctcttttcgatgaactgccttcatcgcaactcttgtatttcgcagaa
atgcgccagccttctgctggttctgacatatccgcaggcacagaaaaggtggacgtgagc
aagagctcctcctcagacaaaatcaggagcacatcatctccttgtcctggctctgagcac
aagaacagaagcacaggattttctagtgatttaaagtctgattcctgtaaaaatacaagc
cttaaagatcatctgaaaaatgctttgactgaaaatgccaaagctcagactgtgaaggtc
tcaaaaaccaagcagcttaaagaagcaatcttatctgaagagatttgtgtagctaggaaa
gctatcggatcatcgtctgtcgatataggccctttttatggattacccagtaaagttaaa
gatctcctccggcagcttcggggcatcgaaacgctttatgaatggcagcacgattgctta
acattagaatgtctacagcagaggaagaatttgatatactcattgccaaccagtggtgga
aaaacgcttgttgctgaaattttaattctccaagaattactctgcatgcagaaggatgtt
ctgatgatcctgccgtatgttgccattgtccaagaaaaggtttggggtttatcaagcttt
gggatagaattaggtttcctggttgaagaatacgcgggaagtaaaggacgatttccaccc
atcaagagaagatgtaaaaagtccctttatattgctacaatagaaaaagggcatatgcta
gtgaattccttgattgaaacagatcaaatcggtgaccttggtcttgttgtggtggatgag
ttgcatatgcttggtgagggaagtcgtggggcaacactggaaatgactcttgcaaaaata
ctctacacaagtaaaagcacacacattgttggaatgagtgcgactttaaataatgttgga
gacctccaaaagttcctgcgagcggagtactacactaaaaattttagaccggtagaatta
aaggaatacataaagatcagagacacaatttatgaagtagacagcaaagcagaaaatggc
tttactttttcacgtctcctgaatttcaagtattctagtaatctgaagaaagcagatcct
gaccacatcattgcactggtcactgaagttattccaaaatattcctgcctaatcttttgt
ccgactaaaaagaactgtgaaaatgtggcttcaatggtgtgcaagtacctgaacaaagaa
tttagatctcacagggagaaagagaaacaagaccttattaaagacctaaagaacattggg
aatggaagtatctgtcctgttttgaagcagacaataccttttggtgttgcctatcaccat
agtggacttacaaatgatgaaagaaagagcatagaggaagcatattctagaggtgtcctg
tgtcttcttgcttgcacagctacattagctgctggagtcaacttgccagctagaagggtt
attttgagagccccttatgttgctagtgatttcctgaagaagaaccaataccaacaaatg
attggcagagctggtcgagctggtattgacaatgctggtgaaagtattctcatagtgcag
gaaaaagacaagcatttggttcaagatttagttaccagtcctttggagaactgttacagc
aatcttctaccggagttcaccaagggaatgcagaacctgttgttatctttggttggattg
aagattgcagttacccaagaggaagtgtacgattttttgtgccatacactgctgggtgtt
cagcagcagctgctgtctaaggagaagagcctcgcagagctggttaaagacgggctagaa
agtctaatagaaaaaggactcctaagagtaaaaataatggagaaggaccaaaattccaaa
ataacattagcaatcacacagttgggtaaagctgcatataaagggtctatagacttgtcg
tactgcaatcttctttacaaagaattgaagaaaggtttggaagggctggttcttgagagc
agtcttcatcttctctacctggcaactccatatgatatggtttctaactgtagcccagat
tggatgatatacttgagacagttcaatcagctaagtgcagcagagcaaacagtagcagat
atggtgggagttcctgaaagctttattgcaaaaaaggcttctggtcaagccatcagaaag
agtgtggacagtgcttctgtaaacaggctctacctgacatttatcctatataccctactg
aaagaaaccaatatatggagcgtttcagaaaaatttaatctgtcccgagggtatgttcag
aatctccttaactctgctgcctcgtttgcttcttgtgttctacatttctgtgagcaggaa
ctggaggaattttgggtttacaaagccctgctgacagaacttatcaagcacttgacgtac
tgtgttaagacagaactcattccgctgatggaggtagcaggggttctagaggcacgagct
aatcagctttataacgcagggtacaaaaccttagcacacttagcaaatgcaaatccagaa
actctagtgaagacgatcgagcatttgtcacggcgtcaagccaagcaaatcgtttcatct
gcaaagatgctgctgactgagaaagctgaggctttacaagaagaagtagaactcctctta
aaggtgcctacagatattccagggacttcctga

DBGET integrated database retrieval system