Aythya fuligula (tufted duck): 116489357
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Entry
116489357 CDS
T07966
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aful03041
]
116489357 (PRPF39)
Spliceosome [BR:
aful03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116489357 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
TPR_16
Mad3_BUB1_I
ARM_TT21_N
TPR_11
Motif
Other DBs
NCBI-GeneID:
116489357
NCBI-ProteinID:
XP_032043536
UniProt:
A0A6J3CWW2
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All DBs
Position
5:1288951..1303822
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AA seq
674 aa
AA seq
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MENSDNTEEEKTTTTTVSNDSTGNGTETATEEQHMDFSTEIMSVTEMEQSPDSSPDLNEE
NAQEEGEIPNIESLQTTDIEAGFPPDFDKFWKVVEDNHQDFTGWVYLLQYVEQENHIPAA
RKAFDKFFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK
DTLDPDDPETNNTIRGAYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTSIYDRILG
IPTQLYSHHFQRFKDHVQNNLPRELLTTEQFIQLRRELASANGHSGEDVSPGDDLPSGTE
DITDPAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLK
NWKEYLEFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACT
IHLPKKPMVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMVRLRRVSLERRHGNMEEA
EHLLEEAIRNAKSVSESSFYSIKLARHLFKVQKNLPKARKVLSEAIEIDKENTKLYLNLL
EMEYSGDLKQNEENILSCFDKAVNGELSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEH
QALLKEQDSLKRRAENGSEEPDEKKMLTDDPTMASAQMMDGDMQVNQAAYNYNAWYQYNY
QNAWNYGQYYSPST
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcggataatacggaggaggagaagacgacaacgacgactgtaagcaatgac
agcacaggcaatggcaccgaaacagcaacagaagaacagcatatggacttcagtacagaa
attatgagtgtaactgagatggaacaatcacctgatagttcccctgatttgaatgaagag
aatgcacaagaagagggtgaaattccaaatattgaaagcttacagacaacagatattgag
gctggcttccctccagattttgacaagttctggaaagtagtagaggacaatcaccaggat
ttcacaggatgggtatatctcctgcagtacgtagagcaagagaaccacataccggctgcc
aggaaagcgtttgacaagtttttcacacattatccatattgctatggatattggaaaaag
tatgcagacctcgaaaagcgacacgacaacattaaacagtccgatgaggtttatcgcaga
gggcttcaggcaattcctcttagtgttgacctttggatacattatataaacttcttaaaa
gacaccttggaccccgatgatcctgaaactaacaatacgattcgaggagcctacgaacac
gcagttttagccgctgggacagatttccgttctgacagactatgggagatgtatataaac
tgggaaaatgagcagggaaacctgagggaagttacatccatatatgatcgtatccttgga
attccaacacagctctacagtcatcacttccaaaggtttaaagaccatgtacaaaacaat
ttgccacgagaacttctaactacggagcagtttattcagctgcgcagagaactggcatct
gcgaatggccacagtggggaggatgtgtcacctggagatgatctgccctctggtactgaa
gatataactgaccctgccaagctaatcactgaaatagaaaacatgaggcacaggatcatt
gagattcatcaagaaatgttcaatcacaatgaacatgaagtcagtaagaggtggacattt
gaggaagggataaagaggccttactttcacgtaaaacctctggagaaagctcagctgaaa
aactggaaagagtacttagaatttgagatagaaaatggaactcatgagcgagttgtggtc
ctctttgaaagatgtgttatttcatgtgccctctatgaggacttctggattaagtatgcc
aaatacatggagaatcatagtattgaaggagtgaggcatgtctacagcagggcttgcaca
atacatcttcccaagaaaccaatggttcacatgctgtgggctgcctttgaggaacagcag
ggcaacatcgacgaagcaagaagaatcttgaaaacatttgaagaatgtattctaggtcta
gctatggttcgcttgcgaagagtaagcttagagcgcagacatggaaacatggaagaagct
gaacacctgcttgaagaagccattaggaacgccaagtcagttagtgaatcgtcattttat
tccatcaaattagctcggcacctcttcaaagtacagaagaatcttccaaaggcaagaaaa
gtgctgtcagaagccatagaaattgacaaagaaaatacaaaactgtatctcaacttactt
gaaatggagtacagcggtgatctcaagcaaaacgaagaaaacattttgagctgttttgat
aaagctgttaatggtgaattgtctataaaaatgaggattacattttctcagagaaaagtg
gaatttcttgaagactttggttctgatgtaaacaagcttttggatgcttatgatgaacat
caagcacttctaaaggagcaggattctttgaaaagaagagcagagaacgggtcagaagag
ccagatgaaaaaaagatgctcacagatgacccaactatggcatcggcacagatgatggat
ggggacatgcaggtcaatcaggcagcatacaactataacgcctggtatcagtacaattac
cagaacgcgtggaattacggacagtattattctccttcaacttga
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