Aythya fuligula (tufted duck): 116489381
Help
Entry
116489381 CDS
T07966
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03022
Basal transcription factors
aful03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116489381 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
116489381 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116489381 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116489381 (GTF2H1)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116489381 (GTF2H1)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116489381 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
116489381
NCBI-ProteinID:
XP_032043593
UniProt:
A0A6J3D1V1
LinkDB
All DBs
Position
5:20245220..20266393
Genome browser
AA seq
557 aa
AA seq
DB search
MYQKFLVATMATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIK
CQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKEL
EEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLA
DVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHR
DRLNTGSKDLFAECAKLDEKGLKTMVSQGVKNPLIDLTALEDKTLDEGYGVAPVASTSNA
SKSARESSNAAIIKRFNHHSAMVLAAGLKKQEAQNDHYSETSSTDGNSRDSDFFQPPMKK
VKLQESIEYEDLATNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIISSFNSIRQEM
EAYVPKLTQVLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGEL
LRHFWSCFPVNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLISHIEEMLQT
AYNKFHTWQSRRMLKKT
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaaagttccttgtagccacaatggcgacatcatctgaagaagtgttactgata
gtaaagaaggtacgtcagaagaagcaggatggggctctctaccttatggctgaaaggata
gcatgggcacctgaaggcaaagaccgcttcacagtcagccatatgtatgcagacataaaa
tgccagaaaatcagtccagaaggtaaagctaagattcagcttcagctagtattgcatgca
ggggacacaaccaactttcacttctccaatgaaagcacagcagtgaaggagcgagatgct
gttaaggatcttcttcaacaactgttgcccaaattcaaaaggaaagctaataaagaactt
gaggagaaaaacagaatgctgcaagaagatcctgttttgtttcagctctataaagacctt
gttgtgagccaagtaatcagtgctgaagaattctgggccaaccgtttaagcctgaatgca
ggggataattctgcagcacctagtaagcaggatgtgggcatctctgcagcatttctggct
gatgtacggcctcaaacagatggttgcaatggtctgaggtacaatttgacttcagatatc
atcgaatccatatttcgaacatatcctgcagtaaaaatgaaatatgcagaaaatgttcca
cataacatgacagagagggaattctggacacgattttttcagtctcattatttccatcgg
gacagactcaatacaggctcaaaagacctctttgcagaatgtgccaaactggatgaaaaa
gggttaaaaacaatggtatctcaaggagtaaaaaaccctctgatagatttaacagctttg
gaagataaaacgttagatgaaggctatggtgttgctcctgtggcctctacatcaaatgcc
tcaaaatctgctagagaaagtagcaatgctgccattataaaacgctttaatcatcatagt
gccatggtccttgcagctggcctcaaaaaacaagaagcacaaaatgaccattacagtgag
accagcagtacggatggaaactccagggattcagatttctttcaaccaccaatgaaaaag
gtgaaactacaggagtccattgaatatgaagatttagcaacgaataatagcattaaaact
attgcactaaacttaaagaaatctgacaggtattatcatggtccaactccaattcaatca
cagcaatatgcaaccagtcaggatataattagttcttttaatagtattaggcaagaaatg
gaagcatatgtacccaaactaactcaggttctttcaagtggtgatgctactagcactatt
gcagtcctgtcacctggaggagcacttatgcagggtggaacacagcaagccataaaccag
atggtgccaaatgacgttcagtctgaactaaaacacttgtatgtggcagtaggggaactg
ctacgacacttctggtcctgctttccagttaatacgccattcctagaagaaaaggttgtg
aaaatgaggagcaacttggaaagatttcaggtgacgaagctctgcccattccaagaaaag
attcggagacagtatttaagcacaaatttgataagtcatatagaagagatgctgcagacg
gcctacaataaattccatacatggcagtcccgccgtatgctgaagaagacgtga
DBGET
integrated database retrieval system
