Aythya fuligula (tufted duck): 116489673
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Entry
116489673 CDS
T07966
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116489673 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aful04121
]
116489673 (RAG1)
Enzymes [BR:
aful01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116489673 (RAG1)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116489673 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
116489673
NCBI-ProteinID:
XP_032044101
UniProt:
A0A6J3CYE2
LinkDB
All DBs
Position
5:49518818..49521943
Genome browser
AA seq
1041 aa
AA seq
DB search
MSIASQMDLPEEIQHPYTKFSEWKFKLFKVRPSEKTFSDNSQCINKDQAEEVASTDKGIM
LHKDEGVPRGEKILTQTDLMGNRQALGKDANDMKIQDNTEHQNNLKQLCRICGVSFKSDC
NKRSHPVHGPVDDETLCLLRKKEKKATSWPDLIAKVFKIDVRGDVDTIHPTRFCHNCWSI
IHRKFSNTPCEVYFPRNSTMEWQPHSANCDVCHGTSRGVKRKSQLPSVQHGKRVKTIAER
ARVNRGGKNQAQINNKNVMKEITNCKNTHLSTKLLAVDYPVDFIKSISCQICEHILADPV
ETTCRHLFCRTCILKCIKVMGSYCPSCWYPCFPTDLVTPVRSFLNILDSLSIRCPVKECD
EEILHGKYGQHLSSHKEMKDRELYSHINKGGRPRQHLLSLTRRAQKHRLRELKCQVKAFA
EKEEGGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCS
QYHKMYRTVKAVSGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKSVSANTEVGIIDGLS
GLPLSIDDYPVDTIAKRFRYDTALVSALKDMEEEILEGMKAKNLDDYLNGPFTVVVKESC
DGMGDVSEKHGNGPAVPEKAVRFSFTVMNISIAHGNERVRIFEEVKPNSELCCKPLCLML
ADESDHETLTAILSPLIAEREAMKNSELLLEMGGILRTFKFIFRGTGYDEKLVREVEGLE
ASGSTYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGV
SAKPFIETVPSIDALHCDIGNATEFYRIFQMEIGEVYKNPDVSKEERKRWQLTLDKHLRK
KMNLKPMMRMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPA
KECPELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASE
GNESGNKLFRRFRKMNARQSKFYEMEDVLKHHWLYTSKYLQKFMNAHKTLRSQGFTIDPE
DSLGDSLPLEVSMESNDSEEL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagcatcacagatggacctgcctgaagagattcagcatccttatacaaaattt
tctgaatggaaattcaagctgtttaaagtgagaccatctgaaaaaacattttctgataac
agccagtgcataaataaggatcaggcagaagaggtagcttctacagacaaaggcatcatg
ctgcataaagatgaaggagttccaagaggagaaaaaattctgacacagacggacttaatg
ggcaataggcaggcacttgggaaagatgccaatgacatgaaaatacaagacaacacagag
catcagaacaacctgaagcaactttgccgcatctgtggagtttcatttaagagtgactgt
aacaagagaagtcatccagtacatgggccagtggacgatgaaactctgtgtcttctgaga
aagaaagagaaaaaagcaacctcttggccagatcttatcgctaaggtttttaagattgat
gtgagaggggatgttgacactatccatcccactcgattttgtcacaactgctggagtatt
atccacaggaaattcagtaacactccatgtgaagtgtattttcctaggaacagcacgatg
gagtggcaaccccactctgcaaactgtgatgtgtgccacggtaccagccggggagtcaaa
agaaaaagccagctacccagcgtacaacatggcaaacgtgtgaagaccattgcagaacgt
gctcgagttaacagaggcggaaagaaccaagcacagataaataacaaaaatgtaatgaaa
gagatcaccaactgcaagaatacacatctcagcaccaagctgcttgcggttgattaccca
gtagatttcattaaatccatctcttgccagatttgtgaacatattttggcagatccagtg
gaaacaacatgtagacacttgttttgcagaacttgcatccttaaatgcatcaaagttatg
ggcagctattgcccctcctgctggtatccttgcttccctactgatctggttaccccagtg
agatcgttcctgaacatccttgatagcctgagcataagatgccctgtaaaggaatgtgat
gaagagatcttgcatggaaaatatggccagcacctctccagccacaaggagatgaaagat
agagagctctatagccacataaacaaaggtggccgaccgaggcagcatcttctgtctttg
accaggagagctcagaaacatcgtctgagagaactgaaatgtcaagtcaaggcttttgct
gagaaagaagagggtggtgatataaaggccgtatgcatgactttgttcctgctagcttta
agagcaaaaaatgaacacaaacaagcagatgaattggaggctataatgcaagggagggga
tctggactccaccctgctgtctgcctggcaatccgagtcaacacgttcctcagctgtagc
caatatcacaaaatgtatagaactgtaaaagctgtcagtgggaggcagattttccagcca
ctgcatgctcttcgcactgctgagaaagctctcttaccaggttatcatccatttgagtgg
aaacctcccttgaaaagcgtctccgctaacacagaagtgggaattatagatggactatca
ggattgccactctcaattgatgactacccagtagacacaattgcgaagagatttcgatac
gatacagccttggtttctgccttaaaggacatggaagaagagatcttggagggcatgaaa
gcaaaaaacctggatgactatttgaatggtcccttcactgtggtcgtaaaagagtcctgt
gatggaatgggagatgtcagcgagaagcacggaaatgggcctgctgtcccagagaaggcc
gttcgcttttcttttacagttatgaacatttctatagcccatgggaacgaaagggtaagg
atctttgaagaggtaaagcccaattcagagttatgttgcaagcccttgtgccttatgctg
gccgacgaatcggatcatgaaactctgacggcgatcctgagccctctcatagcagaaagg
gaggctatgaagaacagcgaactgctacttgaaatgggaggcatcctgagaacattcaaa
ttcatctttcggggtacaggatatgatgagaaacttgtacgggaagtggaagggctggag
gcctcaggttccacctacatctgtaccctctgtgacgcgacccgcctggaggcgtcccag
aatttggtcttccactccatcaccaggagccacgctgaaaatctggagaggtacgaaata
tggagatccaacccttaccacgaatctgttgatgagctccgtgacagagtgaagggtgtt
tcagccaaaccttttattgagactgtgccctccatagacgcgttgcactgtgacattggc
aatgcaacggagttctacaggattttccagatggagatcggtgaagtctacaagaatccc
gatgtatctaaagaggagaggaagagatggcagttgactcttgacaaacacctcaggaag
aagatgaacttaaaaccgatgatgaggatgagtggaaactttgcgagaaagctcatgtcc
aaagagacggtagaggcagtatgtgaattaataaagtgtgaggaaaggcatgaagccctg
aaggaactaatggacctttatctgaaaatgaaaccagtgtggcgatcttcatgccctgcc
aaggagtgcccagaattgctgtgccagtacagctacaattcacagcgttttgctgagctc
ctgtctacaaagttcaagtaccgatatgaaggcaagatcacaaattatttccacaaaacc
cttgctcatgttcctgaaatcattgaaagagatgggtccattggtgcctgggcaagtgaa
ggaaacgagtctggaaacaaactgtttaggaggttccgaaaaatgaatgccaggcagtct
aaattctatgaaatggaggacgtcttgaagcatcactggctatatacatctaagtacctc
cagaagttcatgaatgctcataaaacattaagaagccagggcttcaccatcgatccagaa
gatagtttaggtgattccttgccgctggaggtctctatggaaagcaatgattcagaggaa
ctctaa
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