Aythya fuligula (tufted duck): 116489937
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Entry
116489937 CDS
T07966
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04140
Autophagy - animal
aful04148
Efferocytosis
aful05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116489937 (VPS18)
04148 Efferocytosis
116489937 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116489937 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116489937 (VPS18)
Membrane trafficking [BR:
aful04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116489937 (VPS18)
Hops complex
116489937 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
Lact-deh-memb
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
Nup54_57_C
LETM1_C
STX17_N
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
116489937
NCBI-ProteinID:
XP_032044616
UniProt:
A0A6J3D009
LinkDB
All DBs
Position
5:32807787..32817790
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSAAVQQSRAAVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEARVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKARTLSRWKGHLIESVGWNKFLGTETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFALHADHLPSFREFPASFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGNLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNEQVVFQDLFL
EKFGTLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSSL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKGHHRPKDADTASLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggactccctgcaccgctccgccgccgtgcagcag
agccgcgccgccgtgggcatcccgcactccgggtatgtgaatgcacggctggagaaggaa
acaccaatatttaacaagcaaagaattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtggagttgggacgcaaagatgaagccagagtc
tacaagatgtttttggaccacacaggctctcatctgctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagcacggacactctcccgctggaaaggccac
ttaattgaaagcgtgggctggaacaaatttcttggtacagagaccaacactgggcctatc
ctggtgggaacagcccaggggcaaatctatgaagccgaaatatctgtcagtgagggaagc
ctcttcagcactaatcccgaccagtacttccgacaggtctacactctggaggaggaatca
ggacccgcaccagtctgctgtttggagattgaacgaggaatagaagggaaattctttatt
atcgccaccactcgaaagagactattccagtttgttggcaaagtgcctgaagggacagag
cagcaaggcttcagctccatatttgctctgcatgctgaccatttgcccagcttccgagag
tttccagccagctttggtttcagcgagatagccttttacactccaaaactgcgttccaac
ccacgctcctttgcctggatgatgggaaatggtgttctgtatggtaatttggattatagc
cgtcctgattcaattctgagtgatgaacgggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtacttacccagtttcactttctgttgctgctgcct
gaccgggtaaaggctgtatgcactttgaatgagcaggttgtctttcaagacctgttcctg
gagaagtttggcacattgacacgcatgatcaaggatcccacagttcagcagatatggatc
cacacagagaaagtagtgttccgctatcatgttcagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagctaaagagtattgtaaagaccgtccggag
tgcctagacattgtgttggcaaaagaggcagagcactgcttccaaaacaagagataccta
gacagtgccaaatgttatgcgctgacccagaactacttcgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtagcttg
aagccttctgagaagacacagaccactcttctgaccacgtggttaacagagctgtacttg
aactggctaggtatattggagggagatccctcacagcgaaatctctatttggatacgcgg
gagaagtttcgcaccttcctgagcagccctaaaaacaaagactgtctgtttaataatcgg
gcatctatttatgaactgttggcgagccatggggacacggagcacatggtctacttcgca
gtcatcatgcaggactatgagcgagtagtagctcaccactgccagcatgatgagtatgat
gaagctttaaacgtgctgtctaggcacagagatgagaagctgttctacaagttctcccca
gtcctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggctccaga
cttgatgccaggaatctcattccagctcttgttaactacagccagagtgccagcacccag
cagatcaatgaagccattagatacatggagttctgtgtctatcagttggaggaaacccag
caagctattcacaactacttgttgtctctctacgctttgtgtcggccagattcgctgcta
tcatacctggagcaagcaggaaccaatccaaacaggatccactacgacctgaagtacgca
ctgcgcctgtgtgcagagcatgggcaccaccatgcttgtgtccatatttacaaagtgatg
gaattatatgaagaagccgtggatcttgcgttacaggtggatgttgatctcgccaagtcc
tgtgcagacctccccgaagatgacgaggaactccggaagaagctctggttgaagattgct
cgccatgttgttcaagaagagaaagatgtcaagaaggcaatggcttgcctctccagctgc
gcccttctgaagattgaagacgtcctgccattctttccagactttgtcactattgaccat
tttaaggaggcaatctgtaactctctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagagaattcgagaggacatccaggaaatg
agaaataagtatggctccgttgagcctcaggaaaagtgtgctgcttgtgactttccactt
ttaaaccgcccattttaccttttcctttgtggtcacatgttccattatgactgtcttctt
caggcagtttttccaaaccttcctgcctataagcaggcaaagcttgaagatcttcaaaag
aagctggcagctaccagtcagccttccaaaggccaccatcgtcccaaggatgcagatact
gctagcttggggaaggggcagcagagccgggaacaaatcaaagctgacattgatgatatt
gtggcagccgaatgtgtgtactgtggagagctgatgatccggtccattgacaagcccttt
attgatccccaaaagtacgaagaggagatgcaaagctggctgtag
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