Aythya fuligula (tufted duck): 116490117
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Entry
116490117 CDS
T07966
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aful03000
]
116490117 (SSRP1)
03036 Chromosome and associated proteins [BR:
aful03036
]
116490117 (SSRP1)
Transcription factors [BR:
aful03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
116490117 (SSRP1)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
116490117 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
116490117
NCBI-ProteinID:
XP_032044924
UniProt:
A0A6J3D390
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Position
5:complement(53716549..53722100)
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AA seq
706 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDE
SFNPVEEDDDVAEEFDSNASASSSSGDGDSDRDEKKPAKKAKIVKDRKPRKKQVESKKGK
DPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
ARRDYEKAMKEYSVGSRSESSKTERSKKKKKKQEKQMKGKAEKKGAASRSSSSTKSSAKS
LSESFKSKEFVSSDESSSAESKKEDSEEEGGASPPASSEDSASGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgctggagttcaacgagatctaccaggaggtgaagggctctatgaacgac
ggccggctgcggctgagccgccagggcgtgatcttcaagaacagcaagacggggaaggtg
gacaacatccaggcctcggagctggccgagggcgtgtggcgccgcgtggccctcggccac
ggcctcaagctgctcaccaagaacggccacgtctacaaatacgatgggttccgggaatcg
gagttcgacaagctgtcggatttcttcaaggcccactatcgcctggagctggcggagaag
gacctgtgtgtgaagggctggaactggggcacggtgaggttcggagggcagctcctctcc
ttcgacatcggggagcagccggtgttcgagatccccctcagcaacgtctcgcagtgcacc
acgggcaagaacgaggtgacgctggagttccaccagaacgacgacgccgaggtctcgctc
atggaggtgcgcttctacgtgccccccacccaggaggacggcgtggaccccgtggaggcc
ttcgcgcagaacgtcctgtccaaggcggacgtgatccaggccacgggcgatgccatctgc
atcttccgggagctgcagtgcctgacgccccgcgggcgctacgacatccgcatctacccc
accttcctgcacctgcacggcaagaccttcgactacaagatcccctacaccaccgtgctg
cgcctcttcctgctgccacacaaggaccagcggcagatgttcttcgtgatcagcctggat
ccccccataaagcagggccagacccgctaccacttcctcatcctgctcttctccaaggac
gaggacatctcgctgaccctcaacatgaacgaggaggaggtggagaagcgcttcgagggc
cggctgaccaagaacatgtccggctccctctacgagatggtcagccgcgtcatgaaggca
ctggtcaaccgcaagatcaccgtgcctggcaacttccaggggcactcgggagcgcagtgc
atcacctgctcctacaaggccagctcggggctgctgtacccgctggagcgcggcttcatc
tacgtgcacaagccgcccgtgcacatccgcttcgacgagatctccttcgtcaacttcgcc
cgcggcaccaccaccacccgctccttcgacttcgagatcgagaccaagcagggcacgcag
tacaccttcagcagcatcgagagggaggagtacgggaagctcttcgacttcgtcaacgcc
aagaagctgaacatcaagaaccggggcctgaaggagggaatgaagcagagctacgacgag
tacgccgactccgacgaggaccagcacgatgcctacctggagaggatgaaggaggagggc
aagatccgcgaggagaacgccaacgacagcagcgacggctccggggaggagacggatgag
tccttcaaccctgtcgaagaggacgatgacgtggctgaagagtttgacagcaatgcctcg
gccagctcctccagcggcgacggcgacagcgaccgggatgagaagaagccggccaagaag
gccaagatcgtcaaggaccgcaagccccgcaagaagcaggtggagagcaagaaggggaaa
gaccccaacgcccccaagaggcccatgtccgcctacatgctctggctgaacgccaaccgc
gagaagatcaagtccgaccaccccggcatcagcatcacggacctgtccaagaaggctggg
gagctctggaaagccatgtccaaggagaagaaagaggagtgggatcgcaaggcagaagat
gccaggagggactacgagaaggccatgaaggagtacagcgtgggcagcaggtccgagagc
tccaagacggagaggtctaaaaagaagaagaagaagcaggagaagcagatgaaggggaaa
gcggagaagaagggcgctgcctccaggtcttcgtcctccaccaagtcctctgccaagagc
ctgagcgagagcttcaagagcaaggaattcgtctccagcgacgagagctcctccgcggag
agcaagaaggaggactcggaggaggagggaggcgccagcccccccgccagctcggaggat
tccgcctcgggctcggattag
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