Aythya fuligula (tufted duck): 116490145
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Entry
116490145 CDS
T07966
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116490145 (CAPRIN2)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116490145 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
116490145
NCBI-ProteinID:
XP_032044990
UniProt:
A0A6J3D3Q3
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Position
1:63318216..63355606
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AA seq
1170 aa
AA seq
DB search
MVQLSQAPFRRPSSPSGRSEDGEEKGMKAAKQQVNASGESQPSPSPLQTALNSAASPSQA
YETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKKGEALNQDQLEAVEKYDEVVHNLEFA
KELQKTFSGLSQDLLKAQRKAQRRESLLKLEAEKKKLRTILQVQYVLQNFTQEHVQKDFK
GGVNGAIYLPSKELDYLIRFAKLTCPERNENLSVEDQMEQSSLYFWDLLEGSEKPVVGTT
YKHMKDLLSKLLDSGYFESIPAPRTTVPVKELEEVNRKPERTRQISKGESVKETESLMEL
MKSEIQPQEFLNRRYLPEAEYSVKKKPEEPKSWEAESARKQEPPKSWEMLVDIEEQKQKQ
ETLKPWESRVRQQETKRPDSPKPWEARVKEEEQKREPTKPWETRVEEQKKQEAPKAWVAH
VREEQESPKPWVAKVREEQEQKKQESPKPWVAKVREDQEQKKQESPKAWVTKAKEETEQK
QEPPKPWVTQTREEPEQKKTEPVKSWEMHVREEPEQKKQEPVKAWAAAHVREEPEQKKQE
TREAWETAERQQQVSSQQLQNPPKSWGAASVGPKEQMGPKKFDMEPKEVPKPVHQPAAEF
CSTSTLPKDPVLRREKLQDLMTQIQGTYNFMQESILDFDKASPSAIGSSQPPSVTPASSP
VVSKEQKLPSQSDFLQQPLQATASSMTLHGSNTSLASADQTLSGSETEDLVTPQASASLP
QETEKYASQPLYQTSSRVSEPLIPKKIEIAQATVPLPSEPQSPLPTSSTSVTPVPQAQSF
QSPPASSSSVTITAAPFQAMQTVFKVNAPLPPRKDQEIKEESSYSTGYNQSFSTASTQTP
PQCQLQSSHVAEQTSLSQESLSSAVNYQPDGAVPVSNGSLAFYPAQTNVIPRPPQPYLNS
RGSVRGSARGGRSLANSYRSPGGYKGFDAYRGSPSITNGNYGQLQFPGRDYAGMQYSQRD
VNYQQCYKRGGITSGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSITPVDMPV
TSQAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDIQLGRF
NCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLFQG
DQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttcccaagcccctttccgccgcccatcgtcaccttcaggccggtcagag
gacggggaggagaagggcatgaaggcggccaagcagcaggtgaacgcgtcgggggagagc
cagccttcccccagccccctgcagactgcgctcaactcggcggcctctccttcccaggcg
tacgagacttacattgataatgggcttatctgcctcaaacacaagatcaggaacattgag
aaaaagaagcttaagctagaagactacaaagatcgactgaagaagggagaagctctcaat
caagaccagttggaggcagtagagaaatacgatgaagtagtacacaacttagaatttgcc
aaggagcttcagaagactttttcaggtcttagccaagacctgctgaaagcacagagaaag
gctcaaagaagagagagtctattgaagcttgaagcagagaagaaaaaactgcgtacaata
cttcaagtccagtatgtgctgcagaacttcactcaagagcatgttcagaaagatttcaaa
ggtggtgtgaatggtgcaatatacttgccttctaaagaactagactacctcataagattt
gcaaaactgacatgtccagaaagaaatgagaacttgagtgttgaagatcagatggaacaa
tcatctctttatttctgggaccttctagaaggcagtgagaagcctgttgttggaacaaca
tataaacatatgaaggacctgttatccaagcttctagactctggttactttgaaagtatt
cctgctcctcgcaccactgtgccggtaaaagaattggaagaagtaaatagaaaacctgag
aggacaagacaaatctcaaaaggagagtctgtcaaggaaacagaatcccttatggagctt
atgaagtctgaaatacagccacaggagtttctcaacaggcgttatttgcctgaagcagag
tactctgtcaagaagaagccagaagagcccaagtcttgggaagctgagagtgctagaaaa
caagaaccgccaaagtcctgggaaatgcttgttgatattgaagagcagaaacagaaacaa
gagaccttaaagccttgggaatctcgtgttaggcagcaggaaacaaaaagaccagattca
ccaaagccttgggaagctcgtgttaaagaagaagaacagaagcgtgagcctacaaagccc
tgggagacccgtgttgaagaacaaaagaagcaagaagctccaaaagcctgggtagcacat
gttcgagaggaacaggagtccccaaaaccttgggtagcaaaggttagggaagagcaggaa
cagaagaaacaggagtcacctaagccgtgggtagcaaaagttagggaagaccaggaacag
aaaaaacaagagtcaccaaaagcttgggtgaccaaagctaaggaagaaacagaacaaaag
caggaacctccaaaaccttgggtgacccaaactagggaggaaccagaacaaaagaagaca
gagcctgtgaagtcatgggaaatgcatgttagggaagagcctgagcaaaagaagcaggag
cctgtgaaggcttgggctgctgcacatgttagggaggaaccagagcaaaagaagcaggaa
actcgagaggcttgggaaacagctgagagacagcagcaagtgtcatcacagcagttacag
aatcctccgaagtcctggggagctgcaagtgttgggccaaaggagcagatggggccaaag
aagtttgatatggaacccaaagaagtgcctaaacctgtacatcagccagctgcagaattt
tgctctacttcaactcttccaaaagatccagtactgagaagggaaaaacttcaagatctg
atgactcagatacaagggacttataacttcatgcaagagtccattctggattttgataaa
gcttcaccaagtgccattggttcatctcaaccaccttcagttactccagcaagtagtcct
gtagtttcaaaagagcagaaactgccaagtcaaagtgattttcttcaacaaccccttcag
gctactgcttcatccatgaccctgcatggttctaatacttccctagcatctgctgatcag
accctttccggctctgaaaccgaagacttggtgacaccacaggcatcagcatcacttcct
caagagactgagaaatatgcttcccagccattgtatcagacaagttcacgcgtttctgag
ccactgatacctaaaaagattgaaattgcccaggcaactgttcccctcccaagtgagcca
cagtcaccgttgccaacttcgagcacctctgtgacaccagtgccacaagcgcaaagcttt
cagtctcctccagcaagtagcagttctgtcacaataacagcagctccctttcaggctatg
cagactgtgtttaaggtgaatgcaccgctgcctccacgtaaagaccaggaaattaaagag
gagtcttcatattcaacgggatataaccagagtttctctacagcaagtacacagactcct
cctcaatgccagctgcagtcttctcatgttgcagaacaaacctctctttcacaagaatct
ctgtcttcagcagtgaattatcaacctgatggagctgttcctgttagcaatggtagtctc
gccttttatccagcacagactaatgttataccaagaccccctcagccttaccttaatagt
cgagggtctgtcagaggatctgctagaggtggaaggtcactggccaattcatatcgttca
cctggtgggtataaaggttttgatgcttacagaggttcaccctcaataactaatggcaac
tatggccagctgcagttccctggtagagattatgctggaatgcaatattctcagagggat
gttaactaccagcagtgctataaacgaggtgggataactagtggtcctcgagcaaattca
agagcagggtggagtgattcttctcaggtgagcagtccagaacgagacaacgaaaccttt
aacagtggagactctgggcagggagactcccgcagcatcacccctgtcgatatgccagtg
acaagccaagctgccaccatactaccagtgcacgtctaccccctcccgcagcagatgaga
gttgccttctctgcagccagaacatccaacttggcccctggaactctagaccagccaatt
gtgtttgacctgctgctgaacaaccttggagaaacttttgacatccagcttggtagattt
aattgtccagtgaatggtacttacgtcttcatcttccacatgctgaagctggctgtaaat
gttcccctatacgtgaatctcatgaagaatgaagaggtcctagtgtcagcatatgcaaat
gatggggctcctgatcatgagactgctagtaatcatgcagtcctgcagctgttccagggg
gatcagatctggttacgtctgcatcggggagccatctatggaagtagctggaaatactct
accttttcgggatacctcctttatcaggactaa
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