Aythya fuligula (tufted duck): 116490300 Help Entry 116490300         CDS       T07966                                  Symbol IGHMBP2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism aful  Aythya fuligula (tufted duck) Brite KEGG Orthology (KO) [BR:aful00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:aful03009]     116490300 (IGHMBP2)    03012 Translation factors [BR:aful03012]     116490300 (IGHMBP2) Enzymes [BR:aful01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      116490300 (IGHMBP2)     5.6.2.5  RNA 5'-3' helicase      116490300 (IGHMBP2) Ribosome biogenesis [BR:aful03009]  Eukaryotic type   Other ribosome biogenesis factors    116490300 (IGHMBP2) Translation factors [BR:aful03012]  Eukaryotic type   Initiation factors    Initiation associated factors     116490300 (IGHMBP2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 Viral_helicase1 zf-AN1 ResIII Helicase_RecD DEAD nSTAND3 AAA_16 AAA_22 UvrD-helicase SLFN-g3_helicase Flavi_DEAD IstB_IS21 AAA AAA_25 DnaB_C RL ABC_tran PhoH UvrD_C_2 NTPase_1 Motif Other DBs NCBI-GeneID:  116490300 NCBI-ProteinID:  XP_032045253 UniProt:  A0A6J3D6R0 LinkDB All DBs Position 5:31358335..31400001 Genome browser AA seq 986 aa AA seqDB search MAAAAVEAAAERQLELLRDEREAELAESRAWQENVSLKELQRRGVCLLKLQATNQRTGLY GRLLVTFQPRKYDSDAELPYNSFGPGDILGLYDSVGQGDPLSTGIVTRVTSKAITVAFEE SRDGMLSLDRESSYRLLKLANDVTYNRLKKALNTLKQYRGGPASGLIDVLFFSSDPTSFS ETKPLKFYNDSLDTSQREAVSFSLAQRELAIVHGPPGTGKTTTIVEIILQAVQQGLKVLC CAPSNIAVDNLVERLAGYKAHILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADIRKDI DQAFAKTKKAQDKGERSHFLSEIKALKKELKQREETAMTAALTRASVVLATNTGASSDGP LKLLPEDHFDLVVIDECAQAVEASCWIPLLKAPKCILAGDHKQLPPTIISHKAAASGLSL SLMERLIERYGEKIMKMLTVQYRMHEAIMQWASSEMYSGRLTAHPSVAQHLLKDLPGVTS TEETTIPLLLIDTAGCGLLELEVEDEQSKGNPGEVQLAGLHIQALVEAGVKARDIAVVAP YNLQVDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVA VTRARRHVAIICDTRTVSSHGFLQRLVAYFSQHGEVRTAFEYLDGLVPENYSHESQGERR QGTKPPKARPATGRKPKAAAAAKAAPRKRETPFSPSTSGPGGESPRTKDATNTFKSMLLA FLESSEAQLDFPPSLSSHDRMLVHLLAEEHGLQHGSSGEGKERYITVRKKEPGQPPAPSA ATPSLQRPLPQLQEPPGEAPAPVKTGGSSEGSGKVDLKSLHLERVQREKARREEMARKLQ EPGAGLQGGSKKKDKSEAKGKPAVKTGAEGATEEDIDALISAAIKADNTCGFPHCKASVT TLGQLCLYCNRRYCLSHHVPEVHGCGEKAKAHARQRISREGVLYPGSSSKDKSLDPTKRA HLQRRLDKKLSELTSQRKSKKKDKEK NT seq 2961 nt NT seq  +upstreamnt  +downstreamnt atggcggcggccgcggtggaggcggcggcggagcggcagctggagctgctgcgggacgag cgggaggcagagctcgccgagagcagggcctggcaggaaaacgtctccctaaaggaactg cagcgcagaggtgtctgcttgctaaagctccaagctaccaaccagaggactggcctctac gggcggctgctcgtgacctttcagcctagaaaatatgattcagatgctgagctgccctat aacagttttgggcctggtgacattttggggctttatgattcagtcggccagggcgatcca ctctccaccggcattgtaacacgtgtcacctccaaagcaatcaccgttgcctttgaggaa tctcgagatggcatgctgagcttggaccgtgagagctcttaccgcctgctgaaattagcc aacgatgtcacctacaacaggctaaaaaaagctttaaacacactaaagcaatatcgtggt ggtccagcctctggtctgatcgatgtcctcttcttttcgtctgatccaacctcattcagt gaaacaaagcctttaaagttttacaatgactcgctggacacatcacagagggaggccgtc tccttctcactggcacagagggagcttgctattgtccatggaccacctggcacagggaag accacgacgatagtagagatcatcctgcaagctgtacagcaaggcctgaaagtcctgtgc tgtgccccttccaacatcgcagtggataacctggtggagaggctggctggctacaaagcc cacatcctacggctggggcaccctgctcgcctgctggagcccatccagcagcattccttg gacgcggtcctggcccgcagcgacagcgctcagatcgtggcagatatcaggaaggacatc gaccaggccttcgcaaaaaccaaaaaggcccaagacaagggcgaacggagccattttctc agtgagattaaggcactgaaaaaggagctgaagcaacgagaagaaactgccatgactgca gcccttactcgcgccagtgttgtccttgctacaaatacaggtgcttcctcggatggtcca ctgaagctgcttcctgaagatcactttgatcttgtggtgatagacgagtgtgcacaggcc gtggaagccagctgctggatacctctgctgaaagctcccaagtgcatcctggctggggat cacaagcagcttccccccaccatcatctctcacaaggctgctgccagcggcctttcactc agtttgatggagcgtcttatcgagaggtacggggagaagatcatgaagatgctgacggtg cagtaccggatgcacgaggccatcatgcagtgggcttcctcggagatgtacagcggccgg ctcactgctcacccatcagtagcccagcatttgctcaaggacctaccgggagtcacctcc acggaagagaccacaatccccttactgctcatcgacaccgccggctgtggcctgcttgag ctggaagtggaagacgaacagtccaagggcaatccaggagaggtgcagctggctggtttg cacatccaggctctggtggaagctggtgtgaaggcacgagacatcgctgttgtagccccc tacaacctccaggtggacatgctaagagaacacctttgccacaggtacccagagctggaa attaaatcagttgatggtttccaagggagagagaaggaggcagtgatcctgtcgttcgtg agatccaacaggaagggtgaggtgggcttcctggccgaggaccggcggataaacgtggcg gtgacccgcgcccggcgccacgtggccatcatctgcgacacgcgcaccgtcagcagccac ggcttcctgcagcgcctcgtggcctacttcagccagcacggggaggtgcgcacggccttc gagtacctcgacggcctcgtgcccgagaactactcccacgagagccagggcgagcggcgg cagggcacgaagccccccaaggcgcggccggccacagggaggaagcccaaagcagcagca gctgccaaagcagctccgcggaagcgagaaacacctttctccccgagcaccagcgggcct gggggagagagcccaaggacaaaagatgctacaaacacgtttaaaagcatgctactggca ttcctggagagcagcgaggcccagctggatttccccccgtccctcagttcgcacgatcgg atgctggtgcacctcctggcagaggagcacgggctgcagcatgggagcagcggggaaggc aaggagcgatacatcactgtccgtaagaaagagcctgggcagcctccagccccctcagct gccacccccagccttcagcgtccccttcctcagctgcaggaacctcccggggaagctcct gcccctgtcaagacaggaggaagcagcgagggctcgggaaaagtggacctgaaaagcctg cacctggagagagttcaaagggagaaagcaagacgggaggagatggcaaggaagcttcag gagcccggtgctggccttcaaggcggcagcaagaagaaagacaagagtgaggccaaagga aagccagcagtcaaaaccggggcggagggcgcaacggaagaagatattgatgctctgatt tctgctgccattaaagctgacaacacctgtggcttcccccactgcaaagccagtgttaca accctgggccagctctgcctctactgcaacaggcgctactgcctcagccatcacgtccct gaggttcatggctgcggggagaaggccaaggcgcacgcacggcagaggatcagtagggaa ggggttctctaccctgggagcagctccaaagacaaatccctggaccccaccaagagggcc cacctccagcgccgcctggacaagaagctcagcgagctgaccagccagagaaagagcaaa aagaaagacaaggagaaatga

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