Aythya fuligula (tufted duck): 116490401
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Entry
116490401 CDS
T07966
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116490401 (WDHD1)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
116490401 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
Ctf4_C
WD40
HMG_WDHD1
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_Vps41
HMG_box
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_HPS5
eIF2A
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Beta-prop_LRRK2
HMG_box_2
Beta-prop_SCAP
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
116490401
NCBI-ProteinID:
XP_032045420
UniProt:
A0A6J3D510
LinkDB
All DBs
Position
5:complement(4027000..4058321)
Genome browser
AA seq
1138 aa
AA seq
DB search
MPSAQKPMRYGHTEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAASNNTVQIHTFPEGAPDGILTRFTMNANHVVFNSDGTKIAAGSSDFMVKI
VEVTDSSKQKTFRGHDAPVLSLSFDPRDVYLASASCDGTVRIWKIEDQTCVTNWLLLQKC
NDVINAKSICRLGWQPGSGKLLAIPVDKVVKLYRRETWDNKFDLSDTSITQPLNVVAWSP
CGQYLVAGSVDGSIVVWKVETQECIERTKHEKNYSICGLAWHPKYRQIAYTDTEGNLGLL
EDIGDGKKTNDKVASTAAKDYNDLFDGDDDDYLNGDAIEPPSSPTPGANEDHGDDDDLMP
TASHQRRAILDDDDNSLDIGMIKANSNLLNKEDDDDDQTGGFPALPASSTQQHFYDGPLP
TPRQKPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSVHHATHLPNSLN
HTMADLSTEAILLACESTEELASKLHCIHFSSWDTNKEWTVDMPKEEDIEAICLGQGWAA
CATSALLVRLFTVGGVQKEIFSLPGPVVAMAGHGEQLMVIYHRGTGFDGDQCLGVQLIEL
GKKKKQVLHGDPLSLTKKSYLTWVGFSAEGTPCYVDSEGIVRMLNRRLGDTWIPVCNTRE
HCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILPFTLPYCQVTTEKGQME
EQYWRSIIFHNHVDYLSKNGYEVDENATSQSVKEQQELLMKLFALSCKLEREFRCVELAD
LMTQNVVNLAIKYASRSRRLNLAQRLSEMAVEKASELATALEEEEEEEDFRNHRNAGYSN
SAVERSRLPVRNVQQDEEMEDAEETDEYEEAEETPEVHKQRPNPFSRGVTSAEVTTSKPA
VIASSSQGRVNPFKVSSNKKDPLVPSASVLDNMSKYSKKTSSSSRAVNKQSPPVIKPLIP
KPKSKQASAASFFQTRTPNSSEKTVEERQEKTVEERQEKAVEERQEKAGRESPEVKVTAQ
DNTENKRPKTGFQMWLEENRASILTDNPGLNEAEVIKEGMSRFRVLSSEERMAWTEKAKG
RAANDLTEDKKRKRPTATEDEEKKNQVQKAEDSNLSKKPKTSGQSTNARLSAFAFKQS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcccaaaaacccatgcgctatggccacacggagggccacacggatgtttgc
ttcgatgacaccgggagctgcattgtaacttgtggcagtgatggagatgttaggatttgg
gagaacctggatgatgatgatccgaagtccattaatgttggagagaaggcctattcgtgt
gctctgaagaatggaagactgatcacagcagcatcaaacaacactgttcagatacatacg
tttcctgaaggagctcctgatggcatcctcactcgtttcaccatgaacgcaaaccatgtt
gtctttaacagtgatggtaccaaaattgctgctggatctagtgactttatggtcaaaatt
gtggaggtgactgacagcagcaagcagaaaacgttccgaggacacgacgctcctgttcta
agcctgtcttttgaccccagggatgtttatctggcatcagcaagctgcgatggcactgtc
agaatatggaaaattgaagatcagacatgcgtgacaaattggctactgctgcagaaatgt
aatgatgtgataaatgctaaatcgatatgcaggcttggctggcaacctggcagtgggaag
ttgctggcaattcctgtagacaaagttgttaagctatacagaagagaaacctgggataat
aaatttgatctgtcagatacttccatcacacagcccttgaatgttgtggcctggtctccc
tgtgggcagtacctggtagctggaagtgtggatgggagtattgtggtgtggaaggtggaa
acccaggagtgcatagagaggacaaaacatgagaaaaattactcaatttgtggactggcg
tggcaccccaagtacaggcaaatagcttatacagatactgaaggaaatctggggttgttg
gaggatattggtgatggaaagaaaacaaatgacaaggttgccagtacagcggcaaaagac
tacaatgatctctttgatggagacgatgacgactatttaaatggagatgcgatcgaacca
ccctcttccccaaccccgggagctaatgaggatcacggtgatgatgatgaccttatgcca
actgcaagccatcagagacgggcaatacttgatgacgatgataactcattagatatcggg
atgataaaagctaattccaatcttcttaataaggaggatgatgatgatgatcagactggt
ggctttccagctttgccagcatcgtctacacaacagcatttctatgatgggccattgcca
acccccaggcaaaagcctttccagtctggctccactcctgcacatctcatgcatcgtttc
atggtttggaattctgttggcatcattcgctgctacaatgatgagcaggacaatgccata
gatatcgaatttcatgatacctctgtacaccatgcaacacacctgcccaactctctgaat
cacaccatggctgacctctccactgaagctattttgctagcctgtgaaagcacagaggaa
ctggcaagcaagctccactgcattcattttagctcatgggacacaaacaaggagtggacg
gtagatatgccaaaggaagaagatattgaggctatctgtctaggtcagggctgggctgct
tgtgccaccagcgccttgctggttcgtctgttcacagttggaggagttcagaaagagatc
ttcagtctcccaggtcctgtggtggccatggcaggacatggagagcagttgatggttatt
tatcacagaggtactggatttgatggggaccaatgccttggagtacagctgatagagcta
ggaaaaaagaaaaagcaagttttgcacggagaccctctttctcttacaaagaagtcctat
ctgacatgggttggattctcagcagaaggtaccccctgttacgtggattctgagggaatt
gtgcggatgttgaaccgaagactcggggatacttggattccagtgtgtaacacaagagag
cattgtaaaggaaaatctgatcattattgggttgtgggcatccatgaaaacccccagcag
ctcaggtgtattccctgcaaaggagcccgattccctcctacactcccacgtcctgctgta
gcaattttaccttttacgcttccttattgtcaagttacaacagaaaagggacagatggag
gaacaatactggcgttccattatttttcacaaccatgtggattacttgtcaaaaaatggc
tatgaagttgatgaaaatgctacaagtcagtcagtgaaagaacagcaagaacttctaatg
aaattgtttgccctttcctgtaaactggagcgtgaatttcgttgtgtggaacttgctgac
ctcatgacacaaaacgttgtgaatttagcgatcaagtatgcttctcgctctcgaagacta
aatttagctcagcggcttagtgaaatggctgtggagaaagcaagtgaattggcaacagca
ctggaagaagaagaggaggaagaggatttccgaaatcatcggaatgccggttacagcaac
tcggctgtagagcggagtcgtctgccagtcaggaatgttcagcaggacgaagaaatggaa
gatgctgaggaaactgatgaatatgaggaagcagaagaaacgccagaagtgcataaacag
aggccaaatcctttctccagaggagtcacttcagctgaggtgactacttcaaagcctgct
gtaattgcatcaagcagccaaggacgagtgaatccctttaaggtgtcatctaacaaaaag
gacccactggtcccatcagcgagtgttctagacaatatgagcaaatactcaaagaaaact
tcatctagcagtcgagctgtaaacaagcagagccctccagttataaagcctctgattccc
aaaccaaaatccaagcaggcttcagcagcatccttcttccagactcgtacaccgaactct
agtgaaaaaacggtggaagaaagacaagaaaaaacggtggaagaaagacaagaaaaagca
gtggaagaaagacaagaaaaagcaggaagagagtcccctgaagtcaaagtcactgcacag
gacaacactgaaaacaaaagaccaaagacaggattccagatgtggctagaagagaacaga
gcaagcattttaacagataatcctggcctgaatgaagcagaagttataaaagaaggcatg
agtcgatttagagttctgtcatcagaagaaagaatggcatggactgagaaagcaaaagga
agagcagctaatgatttaacagaagacaaaaaacgaaagcgtcccacggcaactgaagac
gaggagaaaaagaaccaggtgcaaaaagcagaggactcgaatttatcaaaaaaaccaaaa
acttcaggtcaatctacaaatgccagattatcagcttttgcattcaagcaaagctaa
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