Aythya fuligula (tufted duck): 116490462
Help
Entry
116490462 CDS
T07966
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116490462 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116490462 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116490462 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116490462 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
aful00536
]
116490462 (COL6A2)
Exosome [BR:
aful04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116490462 (COL6A2)
Glycosaminoglycan binding proteins [BR:
aful00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116490462 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
116490462 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
eWH_GTF3C1
Motif
Other DBs
NCBI-GeneID:
116490462
NCBI-ProteinID:
XP_032045490
UniProt:
A0A6J3D577
LinkDB
All DBs
Position
6:11214944..11242903
Genome browser
AA seq
1015 aa
AA seq
DB search
MFRQAFFSTLLCLALVSLHAQLEEEPVASCTEKTDCPISVYFIIDTSESIALQTVPIQSL
VEQIKQFIPQFIEKLENEVYQNQVSITWMFGGLHYSDVVEIYSPLTRSKDTYLTKLAAIQ
YLGRGTFTDCAISNMTQQFQTQTARDVKFAVVITDGHVTGSPCGGMKMQAERARDMGIKL
FVVAPSEDVYEHGLREIASPPHDLYRSNYSITQKNALTIDENTIERIIKAMKHEAYAECY
KMSCLEITGPPGPKGFRGQKGAKGSMGEPGSPGMKGQQGDPGIEGPIGYPGPKGVPGLKG
EKGEIGSDGRRGAAGLAGRNGTDGQKGKLGRIGPPGCKGDRGDKGPDGYPGDAGDQGERG
DEGIKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPAGIKGGRGEPGPLGPKGEPGRRG
DPGTKGSKGSPGTKGERGDPGLEGPRGLPGEVGSKGARGDQGLAGPRGPSGVVGEPGKTG
SRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGELGPKGA
QGTKGEKGEPGDPGPAGEPGSRGPTGEAGPEGTPGPPGDPGLTDCDVMTYVRETCGCCDC
EKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSLAKDPKSETGARVGVVQYSH
EGTFEAIKLDDERINSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRREKAQVFA
VVITDGRYDPRDDDKNLGALCGRDVLVNTIGIGDIFDQPEQSETLVSIACNEPQRVQKMR
LFSDLVAEEFIDKMEDMLCPDPQIVCPELPCQTELAVAQCTQRPVDIVFLLDGSERIGEQ
NFHRAHNFVEEVARQLTLARSNNDNMNARIALLQYGSEREQDVVFPLTYNLTEISNALAQ
IKYLDSSSNIGSAIIHAINNIVLSPGNGQRVARRNAELSFVFITDGITGSKNLEEAINSM
KKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYDSLSQPSFFDRFIRWIC
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgttccgacaagcgtttttttccactcttctttgtttggctctagtttctctccatgct
cagttggaagaggagcctgttgcctcctgtacagaaaagacggactgccccatcagtgtg
tacttcatcattgacacctcagagagtattgctctgcagactgtgccaatccagagcctt
gtggagcaaataaagcagttcatccctcagttcattgaaaaactggagaatgaggtctac
cagaaccaagtctccatcacttggatgtttggaggacttcattactcagatgtggtggaa
atttacagccctttaacaagaagcaaagacacatacctcaccaagctggctgctattcag
taccttggccggggcaccttcacagactgtgctatctccaacatgacacagcagttccag
acccagacggcgcgtgatgtgaagtttgcagtggtcatcactgatggccacgtcactggc
agtccctgtggggggatgaagatgcaagctgagagggcgcgtgacatggggatcaagctc
ttcgtcgtggcccccagtgaggatgtctatgagcatggacttcgggagattgccagcccg
ccgcatgacctgtaccgcagcaactacagcatcacacagaagaacgccctgaccatcgac
gagaacactattgagaggataatcaaagcgatgaaacatgaagcctatgccgagtgctac
aagatgagctgcctggagatcacaggtcctcctggtcccaagggattccgagggcagaag
ggtgcaaagggaagcatgggtgaaccaggctcccctggtatgaagggacagcagggtgac
ccaggtattgaaggtccgatcggataccctggtcccaagggtgttccagggctgaaagga
gaaaagggtgagattggatccgatggacggaggggagcagctggcttggcaggcaggaac
ggcaccgatggacagaagggcaagctgggtcgaattggaccaccaggctgcaagggagac
cgtggtgacaagggccctgatggctacccaggagatgcaggagaccaaggtgaaagagga
gatgaaggcataaagggagatcctggtcggcctggccgcagtggacccccaggacctcca
ggagaaaaagggagcccgggaattccaggcaaccctggagctcaaggacctgctggaatc
aaaggaggaagaggtgaaccaggacccctaggacccaaaggagagcctggtcgacgtgga
gatccagggacgaagggcagcaaaggcagtccagggaccaagggagaaagaggagatcct
ggtctagagggtcctcgtggcctgcccggtgaggttggaagcaaaggagcaaggggagac
caaggactggcaggacctcgaggcccttcaggtgttgtgggagaaccaggcaagacggga
tcacgtggggaccctggagacttgggtccaagaggagacgctggaccaccaggaccaaag
ggtgacagaggcaggcctggctttagctaccctggacccagaggaccacagggtgacaag
ggtgagaagggtcagccagggcccaagggaggaaggggtgagcttggaccaaaaggagct
caagggacaaaaggagagaagggggaaccgggtgatcctggcccagcaggtgaacctgga
tctcgaggcccaactggtgaagcaggcccagaggggacccctggcccaccaggagatcct
ggcctgactgattgcgacgtgatgacctatgtgcgagagacatgcgggtgctgtgactgt
gagaagcgctgtggtgccctggatatcatgttcgtcatagacagctcagagagtattggt
tacaccaacttcaccctggagaaaaattttgttgtcaacgtggtcagtcggctgggctct
cttgccaaggatcctaagtcggagacaggtgcccgtgttggagtggtgcagtacagtcat
gaggggacctttgaagccatcaagcttgatgatgagcgcatcaattcactgtcaagcttc
aaggaagcagtgaagcgtctggagtggattgctggaggcacctggacaccttctgccctg
cagtttgcctacaacaagctcatcaaagaaagccgtcgagagaaagcccaagtgtttgct
gtggtgatcacagatgggcgctatgaccctcgtgatgatgacaagaacctaggagctctt
tgtggcagggacgtgctcgtcaataccattggcattggagacatatttgatcagccggaa
cagagcgagaccctggtctccattgcctgcaatgaaccccagcgagtccagaagatgagg
ctcttctcagacctggtggcagaggaattcattgacaagatggaggacatgctttgccca
gatccccagatcgtctgccctgagctgccctgtcagacagagcttgcagtggcccagtgt
acacagcgccccgttgacattgtcttcttgcttgatggctctgaaagaatcggggagcag
aatttccacagggcccacaactttgtggaggaggttgcccgacagctcacactggccagg
agcaacaacgacaacatgaatgcccggatcgcactgctgcagtatggcagtgagagagag
caggacgtggtcttcccactgacctacaacctgacggaaatctccaatgcgctggcacag
atcaagtatctggactcctcctccaacattgggtcagccatcatacacgccatcaacaac
atcgtgctcagcccaggaaacgggcagcgagttgcccggcgcaacgctgagctctccttt
gtcttcatcaccgatggcatcacaggaagcaagaacctggaggaggccatcaactccatg
aagaagcaagacgtcatgcccacggtagtggctctggggagtgatgtagacatggatgtc
ctgctgaagcttggcctgggggaccgggcagccatcttccgggagaaggactatgacagc
ctctcccaacccagcttctttgacaggttcattaggtggatatgttaa
DBGET
integrated database retrieval system
