Aythya fuligula (tufted duck): 116490571 Help Entry 116490571         CDS       T07966                                  Symbol COL6A1 Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism aful  Aythya fuligula (tufted duck) Pathway aful04510   Focal adhesion aful04512   ECM-receptor interaction aful04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:aful00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116490571 (COL6A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116490571 (COL6A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     116490571 (COL6A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:aful04147]     116490571 (COL6A1)    00536 Glycosaminoglycan binding proteins [BR:aful00536]     116490571 (COL6A1) Exosome [BR:aful04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    116490571 (COL6A1) Glycosaminoglycan binding proteins [BR:aful00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116490571 (COL6A1)  Hyaluronan   Extracellular matrix or blood plasma proteins    116490571 (COL6A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 DUF1194 VWA_CoxE vWA-TerF-like DUF5507 Motif Other DBs NCBI-GeneID:  116490571 NCBI-ProteinID:  XP_032045788 UniProt:  A0A6J3D8A7 LinkDB All DBs Position 6:11173585..11193616 Genome browser AA seq 1022 aa AA seqDB search MRLHDLLLALLLLHACLLRGGSWAQDISSRLHRAQDCPVDLFFVLDTSESVALRVKPFGD LVAQVKDFTNRFIDKLTERYFRCDRFLVWNAGALHYSDSVVLIKDLTAMPSGRAELKDSV SAISYIGKGTHTDCAIKQGIERLLIGGSHLKENKYLIVVTDGHPLEGYKEPCGGLDDAAN EAKHLGIKVFSVAISPNHLDQRLNIIATDHAYRRNFTATSLKPTRDLDVEETINTIIDMI KANMEQSCCSFECQPPRGLPGPPGDPGHEGERGKPGLPGPKGDAGEPGRPGDMGPVGYQG MKGDKGSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGIQGPPG PKGDPGAYGPKGGKGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPTGEMGDEGSPGQDG PPGERGSNGERGPPGSPGDRGPRGDPGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRG DDGPRGNEGPKGLPGAPGLPGDPGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGT KGYVGPKGDEGEAGDPGNDNLTPGPRGSKGAKGHRGPEGLPGPPGPMGPPGPDECEILDI IMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESR VGVVQYSHNNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTHTGEALQFSKDNLLRRFT SNNNVAIVITDGRSDTLRDRTPLTSLCEVTPVVSLGIGDIFRNNPNPDQLNDIACLGMPT RQGLSIQRDNYAELLDDSFLQNITSYVCREKKCPDYTCPITFTNQADIMLLVDSSTSVGS KNFETTKSFVKRLAERFLEASKPSEDSVRVAVVQYSGKNQQKVEVLFQRNYTVIAKAIDN MEFMNDATDVNAALEYIMSVYQRSSRPGAKKKVLVFSDGNSQGITAKAIERTVQGVQRAG IEIYVLAVGSQVNEPNVRVLVTGKSADYDVVYGERHLFRVPDYTSLLRGVFYQTVSRKIA VN NT seq 3069 nt NT seq  +upstreamnt  +downstreamnt atgaggctgcacgacttgctcctcgcgctgctgctgctgcacgcctgcctcctccggggg ggctcctgggctcaagacatctcctcccggctccacagggctcaagactgccccgtggac ctgttcttcgtcctggacacctctgagagcgttgccctaagggtgaagcccttcggggac ctcgtggcccaagtgaaagatttcaccaaccgcttcatcgacaagctgaccgagaggtac tttcgctgcgaccgcttcctggtgtggaatgccggggcgctgcactacagcgactccgtg gtgctcatcaaggacctgacggccatgcccagcggcagggccgagctgaaggacagcgtg tcggccatcagctacatcgggaagggcacccacaccgactgcgccataaagcagggcatc gagcgcctgctcatcggtggctcccatctcaaggagaataaatacctgatcgtggtgaca gatggacaccccttggaggggtacaaggagccctgtggtggcctggatgatgctgccaat gaagccaaacatttggggatcaaagtgttctccgtcgccatctctcccaaccacctggac cagcggctcaacatcatcgccacggaccatgcctaccgccgcaacttcaccgccaccagc ctgaagccgacccgggacctcgacgtggaagagaccatcaacaccatcatcgacatgatt aaagccaacatggagcagtcgtgctgctccttcgagtgccagcctccccgagggctccct ggacctcccggcgatccaggccatgagggagaaagaggcaagccaggtcttcccggtcca aaaggagatgctggagagcccggcaggccaggggacatgggacctgttggctaccaagga atgaagggtgacaaaggaagtcgaggagaaaagggatcaagaggagccaaaggagccaag ggtgagaagggcaagcgtgggatcgatggcatcgatggcatgaagggagaagctggatac cccgggctacctggctgcaaaggctctcctggattcgatggaattcaaggcccacctgga ccaaagggtgatcctggtgcttacggacccaagggaggaaagggggagcctggggaagat ggaaagcccggccggcaggggatccccggcagccctggagagaagggtgctcctggcaac aggggtgagcctggacccacaggggagatgggggatgagggctccccaggccaggacggt cctcctggagagcggggcagcaatggagaaagaggccccccaggctcgccaggagaccgc ggtccacgaggagatcccggagagcctgggccacctggcgaccaaggtcgggaaggaccc ctcggaccacccggtgaccagggtgaacctggaccaccaggaccgaagggttacagggga gacgacggcccccgcggcaatgagggcccaaagggattgcctggagcacctgggttgcct ggagatcctggcctgatgggagaaaggggggaggatggccctcctggtaatggcacgatt ggattcccaggcgcccctgggcagcaaggagacagaggggaccctggcattaacggaaca aaaggctacgttggccctaaaggtgatgaaggagaagctggagaccctggcaacgataac ctaacccctggccccaggggcagcaaaggagcgaaaggccacaggggtcctgaaggcctc ccggggccacccggacctatgggacctccaggaccagatgaatgtgaaatcttggacatc atcatgaagatgtgctcttgctgtgagtgcacatgtggtcccgtcgacctcctctttgtg ttggatagctcagagagcattggcctgcagaatttccagattgccaaggacttcatcatc aaagtcattgaccgcctaagcaaggatgagcgcgtgaagtttgagcccggggagtcccga gtgggcgttgtgcagtacagccacaacaacacgcaggagctggtggccatgggggatgcc aacatagacaacatcggggcactcaaacaggcagtcaagaacctgaaatggatagctggg ggcacccacacgggagaagccctgcagttcagcaaggacaacctgctgcggaggttcacc tccaacaacaatgtggccatcgtcatcacggacggacgctcagacacgctgcgggaccgt accccactgacctccctgtgcgaggtcaccccggtggtttcccttgggataggcgacatt ttccggaacaacccgaacccagatcagctgaacgacatcgcttgtttaggcatgcctaca agacaaggactgtccattcagagggacaactacgctgagctcctggatgactccttcttg cagaacatcacctcatacgtctgtcgagagaagaaatgtccggactacacctgcccaatc accttcaccaaccaggcggacatcatgctgctggtggacagctccaccagcgtggggagc aagaacttcgagaccaccaagagtttcgtgaagcggctggcggagcggttcctggaggcc agcaagccgtccgaagactccgtgcgtgtcgcggtggtccagtacagcgggaaaaaccag cagaaggtcgaagtcctgtttcagcgtaactacacggtcatcgccaaagccatcgacaac atggagttcatgaacgacgccacagatgtcaacgctgctctggagtacatcatgagcgtg taccagcgctcctcccgtcctggggcaaagaagaaggtgctggtgttttctgatggcaac tcgcaggggatcaccgcgaaggccatcgagaggactgtgcagggggttcagcgggccggt atcgagatctacgtgctggccgtgggcagccaagtcaacgagcccaatgtccgtgtcctg gtcacagggaagagcgcagactacgacgttgtctacggggagcgccacctgttccgcgtg cccgactacacctccctgctgcgtggcgtcttctaccaaactgtctccaggaagatcgct gttaactga

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