Aythya fuligula (tufted duck): 116490648
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Entry
116490648 CDS
T07966
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03022
Basal transcription factors
aful03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116490648 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
116490648 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116490648 (ERCC3)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116490648 (ERCC3)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116490648 (ERCC3)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116490648 (ERCC3)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116490648 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
DUF2605
Motif
Other DBs
NCBI-GeneID:
116490648
NCBI-ProteinID:
XP_032045921
UniProt:
A0A6J3D3I8
LinkDB
All DBs
Position
6:complement(28193056..28214962)
Genome browser
AA seq
780 aa
AA seq
DB search
MGRKEREKKKSKRRHAEEDEDDEDEAAGREPQEAVPSAAGKQVEDGGSKLDEYGAKDYRL
QMPLKADHASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPD
VIQQLLQDHVIKDCRLRNAEGEETELITETFTSKSAISKSSEGGFGPSTSQGADAQNKPD
VPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA
ERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAIRLGKPYIYGPTAQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSSKEEQQQLLQKVLQASDLD
AEEEVVAGEYGSKSVQVSRRTGTMSSLSGADDTVYMEYHTSRSKASTNKHIHPLFKRFRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaaggagcgcgagaagaagaagtcgaagcggcggcacgcggaggaggacgag
gacgatgaggacgaggccgcgggccgggagccgcaggaggcggtgccgtcggccgccggg
aagcaggtggaggacggcggcagcaagctggacgagtacggcgccaaggactaccggctg
cagatgccgctcaaggccgaccacgcctcgcggccgctctgggtggctcccgatggccat
atctttctggaagccttctctccggtttacaaatacgcgcaggatttcttggttgccatt
gccgagcccgtgtgcagaccaacccacattcatgagtacaagctgactgcttactccctc
tatgctgctgtcagcgtcggcttgcagaccagcgacatcactgagtacttacagaagctg
agcaagactggtgtcccggatggaataattcagtttatcaagctgtgcactgtcagctat
gggaaggtgaagctggtgctgaaacacaacagatattttgtggaaagtacccatcctgat
gtcattcagcagcttctgcaagaccatgttattaaggactgtcgcctgagaaatgctgaa
ggtgaagaaacggagctcattacagagacattcaccagtaaatcagcgatttctaaatcc
agtgaaggtggctttggtccatccacatcacaaggagcggatgctcagaacaagccagat
gttccagctgacttatttgagttctatgagcagatggataaagatgaggaggaggaggag
gaaacacagacagtatcctttgaagtcaagcaggagatgattgaagaacttcagaagcgt
tgtatccatttggagtaccctttgctggcagaatatgatttcagaaatgattctgtgaat
cctgatattaacatagatctgaaacctacagctgtcctcagaccctatcaagagaaaagc
ctaaggaagatgtttggaaatgggcgagccagatctggtgttattgtcttgccatgtggt
gctggcaagtccctcgttggtgtgacagctgcctgtacagtccgcaagcggtgtctggtc
cttggcaattctgctgtgtctgtagagcagtggaaagcccaattcaagatgtggtccacc
atcgatgacagccagatatgtcggttcacctctgatgccaaagacaagcccattggctgt
tctgttgctatcagcacatactccatgctgggacacacgactaagagatcctgggaagca
gagagagtaatggagtggcttaaaagtcaagagtggggccttatgatacttgatgaagtg
catactatccctgcaaaaatgttcagacgtgtgctcactattgtacaagcccactgtaaa
ctgggactgactgctaccctggtcagagaagatgataaaattgttgacctgaacttcctg
atcggaccaaagctctatgaagccaactggatggagctgcagaacagtggctacattgct
aaagtgcagtgtgctgaggtttggtgcccaatgtcacctgaattttatcgagaatatgta
gccatcaaaacaaagaaacggatactgctctacaccatgaacccaaataagttccgagcc
tgccaattcctgattaagtttcatgagcgacggaatgacaaaatcatcgtttttgctgac
aatgtgtttgcactgaaggagtatgcaattaggcttggaaaaccctatatatatggtcct
actgcacaaggagaaagaatgcaaattctacaaaacttcaagcacaatccaaaaatcaac
actattttcatttccaaggtaggggatacgtccttcgatctaccagaagccaatgttctg
attcagatttcatcccatggtgggtctcgaagacaggaggctcaaagactggggcgagtg
ctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattctcttgtg
tcccaagacactcaggaaatggcatattcaaccaagcgacaacggtttcttgtagatcaa
ggctacagcttcaaggtaataacaaaacttgcaggcatggaagaagaagaactgtcattt
tcatccaaagaagaacagcagcagcttctccagaaagtcctgcaagcatctgacctagat
gctgaagaggaggtagttgctggagagtatggttcaaagtcagttcaggtgtcacgtcgt
acaggcacaatgagctctctgtcaggagcagatgacacagtttatatggaataccacaca
tctcggagtaaggcatctacaaataaacacatccatccactttttaaacgattccggaaa
tga
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