Aythya fuligula (tufted duck): 116490764
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Entry
116490764 CDS
T07966
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116490764 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116490764 (BARD1)
04121 Ubiquitin system [BR:
aful04121
]
116490764 (BARD1)
03036 Chromosome and associated proteins [BR:
aful03036
]
116490764 (BARD1)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116490764 (BARD1)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116490764 (BARD1)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116490764 (BARD1)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116490764 (BARD1)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
116490764 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
PTCB-BRCT
NIBRIN_BRCT_II
ANK_LRRK2
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
116490764
NCBI-ProteinID:
XP_032046137
UniProt:
A0A6J3DA00
LinkDB
All DBs
Position
6:complement(8443263..8483355)
Genome browser
AA seq
687 aa
AA seq
DB search
MIQLCSKLRHLLGADTSDSTECMSTPTGSDSGNKSKKEQIKMWFSPRSRKIRCILNKGQP
KAKGDGPCQDPSSAYHFFPSPPHEKPKPTKKPAQRQSKKMKKKRLADINKVWGLGKPEQK
GGAEEKTSKEKCVTICSQPVVLCTPEPDSPEETLPQEPLKEADSSTNVEKLEISPEVKSS
EEKENSLDACPAHVSKEKTCAAEESPSIANETTPLKRGREQSSLPVSSQTKRCRRAEGSS
SGRAGRQAARLEESPQGSPISQATEPKTPVQVSSSGSKLAGTAMKTRSSAAMNSPSFPKS
PSTPSTSKACNQVGTPHSPSVFKSPGGANAVARRNYKGETLLHVASIKGDLGAVEQLLKN
GADPNVKDNAGWTPLHEACNHGHKEVVELLLQHKALVNTTGYQNDSPLHDAVKNGHVSIA
ELLLLHGASRDAVNIFGLRPVDYAESEKMKSVLMLPVKNESFSLSQLSESQSTSQARDGP
LGILGSSLSSEQQKLLNKLVTVLKARRCTEFNSTVTHLVIPDVPMPSTVKCMMAVLTGCW
VLKFDWVRACLRSAVREQEEKYEIQGGPQRGRLNREQLLPKLFDGCYFYFLGSFSSHQKS
DLVELVKAAGGQILVRQPKPDSDVTQMINTVAYHAESTSDQRFCTQYVIYDVSSKFKPEK
IRQGKVWMAPSSWIIDCVMSFQLLPVK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatccagctttgcagcaaactgcggcatctgttgggcgcagacacctcggattcaaca
gaatgtatgtccacaccaacaggctctgactctgggaacaagagtaagaaggaacagata
aaaatgtggttcagcccgagaagcaggaagattcggtgcatcctgaacaagggtcagcct
aaggctaaaggcgatggcccttgccaagacccatcttcggcatatcatttctttccttcc
cctcctcacgaaaaacccaagccaacaaaaaagccagcgcagaggcagagtaagaagatg
aagaaaaaacgtctagcagacatcaacaaagtgtggggcctagggaaacctgagcagaaa
ggaggagctgaggagaagacttccaaggaaaagtgtgtgaccatttgtagccagccagtc
gtcctgtgcactccagagcctgatagccccgaagagacgcttccacaggagcctctaaag
gaagctgactccagcacaaatgtggagaaattagaaatttcaccagaggtaaaatcctca
gaggagaaagagaacagcttggatgcctgtcctgcacatgtcagcaaggaaaaaacttgt
gctgcggaggaatccccatcaatagcaaatgaaactacgcctttgaaacgtggaagggag
caatccagcctcccagtttcatctcagactaaaaggtgccgcagagctgaggggagcagc
agtgggagggcaggcaggcaggcagctcgcttggaggagtcacctcagggcagccccatc
tcccaggcgactgaacccaagacacccgttcaggtttcctcctctggatcaaagcttgct
ggcactgcgatgaagacgagaagctctgcagcaatgaatagtccttcgtttcccaaatct
ccctctactccctccacttccaaggcgtgtaatcaagtaggaacaccacacagtccttct
gtgttcaagtcccctggtggagctaatgctgttgcccgaaggaattacaaaggagagact
ttgctccacgtcgcttccatcaagggtgacctaggagctgttgaacagctgctgaaaaac
ggggcagatcccaatgttaaggacaatgctggctggacaccgctgcacgaggcgtgtaac
cacgggcacaaagaggtggtggagctgctgctgcaacacaaagcactggtgaacaccacg
ggctatcagaacgactcgcccctgcacgatgctgtcaagaacgggcacgtgagcattgct
gagctgctgcttctgcacggggcctcccgcgatgcagttaatatatttggtctgcggcct
gtggactatgcagagagtgaaaagatgaagtctgtgctaatgttaccagtgaagaatgaa
tcattttcacttagccagctgtctgagtcacagagcacaagccaggcaagagatgggcct
cttggcatactggggagcagtcttagttcagagcaacagaaactgctgaacaagctagtg
acagtcctgaaggctcgaaggtgcaccgaatttaacagcacagtaactcaccttgttatc
cctgacgttccgatgccaagcaccgtcaaatgtatgatggctgttctgactgggtgttgg
gtcctcaagtttgactgggtacgagcctgcctgcgaagtgcagtccgagaacaagaagag
aagtatgaaatccaaggtggcccacaaagaggccggctcaacagagaacagctgctgccg
aagttgtttgatggatgctacttctattttctgggatctttcagtagccaccagaagagt
gatcttgtggagctggtcaaagcagcaggaggccaaattctggttaggcagccaaaacca
gacagtgatgtgacacagatgatcaacacggtggcataccatgcagaatcgacttctgac
cagcgattttgtactcagtatgtcatctatgatgtgtcttctaaattcaagccggagaaa
attcgtcagggcaaagtctggatggccccctccagctggattatagactgtgtaatgtca
tttcagctgctgcctgtaaagtga
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