Aythya fuligula (tufted duck): 116490902
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Entry
116490902 CDS
T07966
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116490902 (SMARCAL1)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116490902 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
OmpA
DUF7480
Methyltransf_8
DUF3084
Motif
Other DBs
NCBI-GeneID:
116490902
NCBI-ProteinID:
XP_032046408
UniProt:
A0A6J3D7I4
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All DBs
Position
6:complement(32985061..33017333)
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AA seq
974 aa
AA seq
DB search
MSSGLTEEQKKRIEENRQKALARRAERLAAQRGGQVGIAGPQVKEQSPGNWENSKQENNH
VRFINQDQRNPHSPAEQKSYLQKNYNHYSANQQMAGSHGEQQKNCSEDAKQASGIKQFPT
TIPNSLSYSHQQNSDADGQKHRQQASINLGTFQQPTCYPASKNPAEPSHPKLIDNGHPDG
IKDLQSWSKSAIKYVSAPSSATPSDSETLINRSRPTESQGGGGAFQASAKVQKLPSSADA
GSTFEAASRKKVNNVTKGKCVKYGEDRFLVEIGYNAELIAVFKKIPSKSYDPTMKKWNFS
LEDYISFMEAANRLSSVILEPLEGGENVVGLASGSRFGDSGVDVVSLLKMCKNWKKPSAL
VKGKCVLISRFRFEVDIGYSAEVIGVFKQMNSRNYDAKTRKWNFLLEDYPKLVKMFQSLA
SVQVEPLPEAVVQTFAAQIQSSTSQTTDLPEADLSVVDSKIVTSLMPFQREGVNFAIFRN
GRLLLADDMGLGKTIQAICVAAYYRKEWPLLVVTPSSVRFTWAEAFHRWLPSLRPGSTNV
IVTGKDNLTGSLINIISFDLLSKMDKQLKNTFQVVIIDESHYLKNVKTARCRAAMPLLKA
ARRVILLSGTPAMSRPMELYTQIAAVQPGFFPQFHTFGLRYCDAKQMPWGWDYSGSSNLA
ELKILLEESIMIRRLKSDVLSQLPAKQRKMVVVSPEGINAKTKAALAVEAKKMAKGYGNK
QQEKEALLLFYNRTAEAKIHSVVEYILELLESGKDKFLVFAHHKIMLDAIVEELEKKRVE
YIRIDGSTSSAERQSLCQKFQLSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGVL
IQAEDRAHRIGQTSSVNVHYLVAKGTADDFLWPMIQEKIKVLGEAGLSETNFSSTAESTD
YCPKPDPKQKTIYELFQRTFSDCRDDDDELLLLEAADACCEFDSGSACKDTNEERCSVSS
PKKRRIEEVFESVT
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggccttacagaagagcaaaagaaaagaattgaagagaaccgccagaaggcc
ttggctaggagagcagagaggctggcagcacagagaggcggacaggtggggattgcggga
cctcaggtaaaagaacagagtccaggcaattgggaaaactcgaagcaagaaaacaatcat
gtcaggttcattaaccaagaccaacggaatccacacagtcctgcagagcagaagagctat
cttcagaaaaattataatcattactctgcaaaccaacagatggctggttcacatggagag
caacaaaagaattgttcagaggacgctaagcaagcaagtggcattaagcagttccctaca
acgatcccaaattctctgagttattcccatcaacaaaactcagatgccgatggtcagaaa
cacagacaacaagcttcaattaatcttggtacattccagcagcccacatgctacccagct
tccaaaaaccctgcagaaccatctcatcctaaattaattgataacgggcaccctgatggt
attaaagatttacaaagttggagcaaatctgccataaaatatgtttcagcgccgagcagc
gccaccccgagtgattcagaaacactgataaacagaagcagaccaacagaaagccagggg
ggaggtggtgcctttcaggccagtgctaaggtgcagaagctgcccagctctgctgatgca
ggctctacttttgaagctgcctctcgcaagaaagtgaataatgttacaaaaggaaaatgt
gtgaaatacggagaagaccgtttcctggttgaaatagggtataacgctgaactcattgct
gtgtttaagaaaataccaagcaaaagctatgatcctactatgaaaaaatggaatttcagc
ctggaagattacatcagtttcatggaagcggcgaatcggctttcttcagtgattctggaa
ccactggaaggaggagaaaatgtggttggcttggcatcaggctctcgtttcggtgacagt
ggggttgatgtggtgtccctcttgaagatgtgcaagaactggaagaaaccctcagccctc
gtcaaagggaagtgtgtgctgatctctcgcttccgctttgaggttgatattggatattct
gcagaagttattggagtgttcaaacagatgaattctagaaattacgatgcaaagaccaga
aagtggaatttcttgctggaggactatcccaaactggtgaaaatgttccagagcctcgcg
tctgtgcaagtggagccacttcccgaggcagtagtgcagaccttcgctgctcaaattcag
agctccacgtcgcagacgacagaccttcccgaggctgacctttcagtagtggactctaaa
attgtgacgagcctcatgccctttcagcgggaaggtgtgaattttgcaattttcagaaat
ggccgtttacttcttgcggacgacatgggcttgggcaagaccatccaggcgatctgcgtg
gctgcctattaccgaaaggaatggcccttgctggtggtgactccttcttctgtgaggttc
acgtgggcagaggcatttcacaggtggcttccatccttgcgtccaggtagcacaaacgtc
atcgtgactggcaaagacaacctgacgggaagcttgattaacattatcagctttgatctc
ctcagcaagatggacaaacaactcaagaacactttccaagtagttattattgatgaatct
cattacctaaagaacgtaaaaactgcacgatgtcgagctgccatgcctctactcaaggcg
gccaggagagtgatcttgctttcgggaacccctgccatgtcccggcctatggagctctac
acgcagatcgcggctgtccagccaggcttcttccctcagttccacaccttcgggctccgc
tactgcgatgcgaagcagatgccgtggggttgggactactctggatcatccaatttagcc
gaactgaaaattttactggaagaatccatcatgatacgacgtcttaaatcagatgtgctt
tcccagcttccagcaaagcaacgcaaaatggttgtggtgtctcccgaaggcattaatgca
aagaccaaagctgccttggcagttgaagcaaagaagatggccaaaggatatggaaataaa
caacaggagaaagaagctcttctcctcttctacaacagaacagcagaagctaaaatccac
tcagtcgtagaatacatcttggagttactagaaagtggaaaagataaattcctggtgttt
gctcatcacaagataatgctggatgcaatagttgaagagctggagaagaaacgtgttgaa
tatatccgcattgatggctccacctcttcagctgagcggcagtctctgtgccagaagttc
cagttgtcagagaagcaggcggtggccgttctgtccctcactgccgcaaacatgggcctg
acgttgtctgctgcggacctggtggtgtttgcagagctcttctggaatccaggggttttg
atccaagcagaagatcgggcacatcgaattggacagaccagctccgttaacgtccactac
ctggtggctaaaggcacagcggatgacttcttatggccaatgattcaagagaaaataaaa
gtgctgggggaagctggtctttcggaaaccaacttttccagtacagctgaatccaccgat
tactgtcctaagccagatccaaagcagaagaccatctatgaactcttccagaggaccttc
tctgattgcagagatgacgacgatgaacttttgcttttggaagcagctgatgcttgctgt
gagtttgactctggcagtgcctgtaaagacacaaacgaagagaggtgttcagtgagttcc
cccaaaaagcggcgtattgaggaggtttttgaaagtgtaacataa
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