Aythya fuligula (tufted duck): 116491289
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Entry
116491289 CDS
T07966
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116491289 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116491289 (TAF5)
03036 Chromosome and associated proteins [BR:
aful03036
]
116491289 (TAF5)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116491289 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
116491289 (TAF5)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116491289 (TAF5)
STAGA complex
116491289 (TAF5)
TFTC complex
116491289 (TAF5)
SAGA complex
116491289 (TAF5)
SLIK complex
116491289 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_SPT8
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
116491289
NCBI-ProteinID:
XP_032047040
UniProt:
A0A6J3D9X3
LinkDB
All DBs
Position
7:24661561..24671914
Genome browser
AA seq
793 aa
AA seq
DB search
MAAVAEEPPEVAAGKPDPEAGTPPQPPAAAPPAAAASSATAPAAPPAPAAEGEPAGNGGE
AAAAAAKAAAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAAAL
SPAGAGLLGTAGGEGDVGGSEALLNRVTAAAAISVGGSVATVASASPGVAAAATVPPGKV
GGGVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKNFIECSLDCHRAELSQLFYPLFVHM
YLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVL
RISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREA
NKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRI
PLPELKDSDKLDKVMNVKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVG
GFADSTVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVY
GTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDR
VARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTG
HKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILA
SGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTR
RNLLLAAGAYSSQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtagctgaggagccgccggaggtggcggcggggaagcccgaccctgaggcg
gggacgccgccgcagccccccgccgccgctcccccggccgccgccgcctcctccgccaca
gccccggccgctcctccggctccggcggctgagggggagccggcggggaacggcggggag
gcggcggccgccgccgctaaggcagcggcaccgggcccggccgcttcccccgcggcgctg
gaccggcagacgctggtggccgtgctgcagttcctgcggaggagcaacctccgtgagtcc
gaggagatcctccgccgggaagctcgcctgctcggcgacgacttgggagccgctgccctc
agccccgccggagccgggcttttgggaacggccggaggcgagggggatgtgggcggcagc
gaggcgctgctcaaccgggtcaccgccgccgccgccatctccgtaggaggcagcgtcgcc
accgtcgcttctgccagccccggggtggcggcagcggccaccgtgccgccggggaaagtt
ggaggaggtgttgtggaagatcagccagatgtgagcgcagtattatccgcctacaatcag
cagggggaccccacgctgtacgaggaatattacagtggattgaaaaacttcattgagtgc
tcgctggactgtcatcgagctgaattgtctcagctgttttatcctctctttgtgcacatg
tacttggagttggtctacaatcagcacgagagtgaggcaaagtctttttttgaaagattt
catggggatcaggagtgttattaccaggatgacctccgggtattatctagtttaactaaa
aaagaacatatgaaaggtaacgagaccatgctggatttccgaacgagcaagtttgtgctg
cgtatttcccgggactcttaccaactcttgaagaggcatctgcaggaaaagcagaacaat
cagatctggaacattgttcaggaacatctctacattgatatctttgatggaatgcctcga
agtaaacaacagatagatgccatggttggaagcttggctggggaggcaaaacgagaggca
aataaagcaaaggtgttctttggcttactgaaagaaccagagtttgatgtgcctttggat
gatgaagatgaagaaggagaaaacgaggaaggaaaaccaaagaagaaaaaacctaaaaaa
gatagtgtaggatcaaaaagtaaaaaacaagaccctaatgctcctccccaaaacagaatt
cctctgcctgaactgaaagactctgacaaactggataaagtaatgaatgtgaaggaagct
gccagacgtgtgcgtcttggcccagagtgcctgccctccatctgcttctacacattcctt
aatgcttaccagggtctaactgcagtggatattacagatgactctagcatgattgtagga
ggctttgctgactctacagtaagagtgtggtctgtgactccaaaaaagctacgtagtgtg
aaagctgcagcagacctcagtctaatcgacaaagaatcagacgatgtcctggagaggatt
atggatgagaaaacagccagtgagttgaagattttgtatggtcacagtggacctgtctat
ggcaccagcttcagtcctgataggaactatctgttgtcctgttcagaggatggcacagtc
agattgtggagtctccaaacgttcacgtgtctggtgggatataaaggacacaattatcca
gtatgggatacacagttctcgccttatgggtattactttgtgtcagggggacatgacaga
gtggctcgattgtgggcaacagatcactaccagcctttacgaatatttgctggccatctt
gctgatgtcacatgtacccgatttcatcccaactctaactacattgccactggctcagca
gacaggactgtacggctctgggatgttctaaatgggaattgtgtaagaatattcactgga
cataagggaccaattcattcgttggcattttctcctaatggacgattcctggctactgga
gcgacagatggcagagttctgctgtgggatattggacatggcttgatggttggagaattg
aaagggcacactgacactatctatgcgcttcgattcagtagagatggggaaatcttagca
tcaggttcaatggataacacagttcggctgtgggatgccgtgaaagcatttgaagattta
gaaactgatgactttactaccgccactggacatataaacttgcctgaaaactcacaggac
ttattactaggtacatacatgaccaaatcaaccccagttgtacaccttcattttacccgc
agaaacttgctactagctgcaggagcctacagttcacagtaa
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integrated database retrieval system
