Aythya fuligula (tufted duck): 116491318
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Entry
116491318 CDS
T07966
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
116491318 (SHOC2)
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_NLRC4
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
116491318
NCBI-ProteinID:
XP_032047073
UniProt:
A0A6J3D9D0
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Position
7
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AA seq
582 aa
AA seq
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MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKDSKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPAVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaacctgggaaaagaaaaggactgtaaagagaaggatccaaaagtcccgtcg
tcaaaagaaagggagaaggaggccaaagcctccggaggatttgggaaagacagcaaagag
aaggagcctaagaccaaagggaaagatgccaaagacggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaacccagccacaggt
acccgcaaaaaatccagcaacgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcgatgcgcttggacttgtccaagaggtctatacacatgcttccatccgctgtcaaa
gagttaacgcagttaacagaactttatttatacagtaacaaactgcagtctctaccagca
gaggtgggctgtctggtgaacctgatgacactggccctgagtgaaaactcactcaccagc
ctgcccgactctctggataacttgaagaagctgcgcatgcttgacctgcggcacaacaag
ctgcgagagatcccggcggtggtgtacaggctgagctctctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaagctcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagctgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacaccttccagaagagattggaagttgc
acacagatcaccaaccttgacttgcagcacaatgagcttttggacctgccagaaaccata
ggaaatctgtctagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcaaaatgcagtgaacttgatgagctgaatctggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacgctggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aacatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacctctctcccactggactttggaact
tggactagtatggtagaactgaacttagcaactaaccagctcacaaaaatccctgaggat
gtgtctgggcttgtttctcttgaggttcttatattgtcaaacaatctcctaaaaaagctt
ccccatggaattggaaatctaaggaaactccgagagttggatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgaccacccttccgagaggtattggtcaccttaccaatctaacgcaccttggg
cttggagagaatcttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccataccgtgcc
atggtctga
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