Aythya fuligula (tufted duck): 116491353
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Entry
116491353 CDS
T07966
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aful03016
]
116491353 (TRUB1)
Enzymes [BR:
aful01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
116491353 (TRUB1)
Transfer RNA biogenesis [BR:
aful03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116491353 (TRUB1)
Prokaryotic type
116491353 (TRUB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
116491353
NCBI-ProteinID:
XP_032047123
UniProt:
A0A6J3DCA5
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All DBs
Position
7:29513334..29543203
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AA seq
288 aa
AA seq
DB search
MAGGEAGGGGVAARAAQKLFSLSGLFAVYKPKGPTSAAVLNLLKERLLAEAGVQTNGNKR
KSQVLKIGHGGTLDSAATGVLVVGIGKGTKLLKTILAGSKKYTAIGLLGKATDTLDATGK
VTEEKPYDQVTKRDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLVKRGEAVEAKPARP
VRVYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCASMQELTRTKHGPFTLEE
HALHEDKWTIDEIARSLEHCMSLLPGEPSHKKFKTEHPEETAVSCEDK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggggaggcgggtggcggcggcgtggcggccagggcggcccaaaagctcttc
tccctcagcgggctcttcgccgtctacaagcccaagggacccacctcggcagccgtgctc
aacctgctgaaggagaggctgctggcagaagctggcgtgcaaacaaatggtaacaaaaga
aaaagtcaggtcttgaaaattggacacggtggaactttggacagtgcagcgacaggagtt
ctggtggttggcattggaaagggaacaaaactgctgaaaactatattggctggttccaag
aagtacactgccattggactgctgggcaaagctactgatacgttggatgctacaggaaaa
gtaactgaagaaaaaccttatgaccaggtaacaaaaagagatcttgaaaatgtgctgcag
aagttcacaggggacatcatgcaagttcctccgctctattctgctttgaagaaggatgga
gaaaggctatcaactctggtgaagagaggagaagcagttgaagcaaagccagctcggcca
gtaagagtgtacagcctctctctccaacagttccagccaccactgttcacgctggatgtt
gaatgtggcggtggcttttatgtcaggagcctggtcagcgacattggcaaagaactctct
acctgtgccagcatgcaggagctgacccgaaccaaacacgggccatttacgctagaggag
catgcacttcatgaagacaaatggacaattgatgaaattgcgcgatccttagagcattgc
atgtctcttctcccaggagaaccatctcataaaaaatttaagacagagcatcctgaagaa
actgctgtgagctgtgaagataagtaa
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