Aythya fuligula (tufted duck): 116491479
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Entry
116491479 CDS
T07966
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aful03009
]
116491479
03036 Chromosome and associated proteins [BR:
aful03036
]
116491479
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116491479
Ribosome biogenesis [BR:
aful03009
]
Eukaryotic type
Pre-60S particles
Helicases
116491479
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116491479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
LRIF1
Motif
Other DBs
NCBI-GeneID:
116491479
NCBI-ProteinID:
XP_032047356
UniProt:
A0A6J3D7F1
LinkDB
All DBs
Position
7:4729537..4743080
Genome browser
AA seq
707 aa
AA seq
DB search
MPEATRLCAGSGAEAGSDSPMESEAATANGRRRRKKEKKEKKAKRRDKAQKRKSQADESE
QSEDELGSPKVKKAKSREKQNGDAGGESPENARLSSLPLKAARKKQPSNSSETSSGDCDS
DQEQEMTEEQKEGAFSNFPISKVTVELLQARGVTYLFPVQVKTFHPVFSGKDVIAQARTG
TGKTFSFAIPLIEKLQADSQEKRRGRAPKVLVLAPTRELANQVAKDFKDITRKLTVACFY
GGTPYNGQIDLIRSGIDILVGTPGRIKDHLQNGKLDLSKVKHVVLDEVDQMLDMGFAEQV
EDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSKYEQIDLIGKRTQKAATTVEH
LAIACHWSQRAAVIGDVIQVYSGSLGRTIVFCETKKDANELALNASIKQDCQSLHGDIPQ
KQREITLKGFRNGAFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGR
TGICICFYQRKEENQLRYVEQKAGISFKRVGVPSATDIIKASSKDAIRCLDSVPQSAIDY
FKESAQLLIQEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILRCSEEINNMSYA
WRKLREQLGDDVDRKVNRMCFIKGRMGVCFDIPVADQKEIEGKWEDSKQCRLCVANELPE
LEETQRGGGGNSRSFSGSRNGGRRGGSGRNRFRGRGQKRSYDRAFDR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggccacccggctgtgcgccggcagcggggcggaggcgggctccgacagcccc
atggagagcgaggcggccacggccaacggccggcggcggcgcaagaaggagaagaaagag
aagaaagccaagcggcgcgacaaggctcagaagaggaaatcgcaggcggatgagagcgag
cagtcagaggatgagctcggttcgcccaaagtcaagaaagcaaagagcagagagaagcaa
aacggtgatgccggaggagagagcccggagaatgccaggttgtcttccctcccccttaag
gctgcccgcaaaaagcagcccagtaattccagcgaaacgtcaagtggggactgtgacagc
gaccaagagcaggagatgactgaagagcagaaggagggtgctttctccaatttccctatt
tccaaagtgactgttgagcttctgcaagctcgaggagtgacgtacctgttccctgtgcaa
gtgaagaccttccacccagtgttttctggcaaagatgtaattgctcaagcacgaactgga
acagggaagacattctcttttgctattcccttaattgaaaagcttcaggcagactcgcag
gaaaaaagaagaggccgtgcaccgaaggtactggttcttgctccaacaagagagctggca
aaccaggttgccaaagatttcaaggacataacgagaaagctcacggtagcttgtttttat
ggaggaactccatataatggacagattgatctcattagaagtggaattgacattttggtt
gggacacctggtcgaatcaaagaccatcttcagaatggcaagttggacctcagcaaggtg
aaacatgttgtccttgatgaagttgaccagatgttggacatgggatttgctgagcaagtg
gaagacattttgcgagttgcgtacaagaaagattctgaagacaatccccagacgctactg
ttttctgcaacttgcccacattgggtgtatgatgtggctaagaaatacatgaagtctaaa
tatgagcagattgacctaattgggaaaagaactcagaaggctgctacaacagtagaacat
ttggctatagcgtgccactggtctcagagagctgcagttattggagatgtcattcaggtc
tacagtggcagcctcgggaggaccattgtcttttgtgagaccaaaaaggatgcgaatgaa
ctggctctgaatgcttccatcaaacaggattgccagtcattacatggtgacattcctcag
aagcaaagggagatcacgctgaaaggttttagaaacggtgcctttaaggttctggttgca
accaatgtagctgcccggggtttagatatccctgaagttgacctggttgtacaaagttca
ccaccaaaggatgtggagtcctacatccatcgctctggacgcacaggacgagctggccgg
actgggatctgtatctgtttttatcaacgaaaggaagaaaatcagttaagatacgtggaa
caaaaagcgggcatttcattcaagcgtgttggtgttccttctgcaacagatataataaaa
gcttccagcaaggatgctatcagatgtctggattctgttccgcaaagcgctattgattat
ttcaaagaatctgctcagttgctgatacaagaaaagggaccagttaatgctctggctgca
gctctagcacatatttcaggtgctacttcaattgaacagcgctccctgctgaactcggat
gctggatttgttacaatgatactgcgctgctctgaagaaataaacaacatgagctatgct
tggcggaaacttcgagaacagcttggtgatgatgttgataggaaggtgaacagaatgtgc
ttcatcaagggaagaatgggtgtttgctttgatattcctgtggcagaccaaaaggaaata
gagggaaaatgggaagactcaaaacagtgccgtttgtgtgtggcgaatgaattacctgag
ttagaagaaacgcagcgaggaggaggaggaaacagcagaagcttctccggctccaggaat
ggggggcggcggggcggctctggaagaaacagattcagaggcagaggccagaagcggagt
tacgacagagcctttgatcgttaa
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