Aythya fuligula (tufted duck): 116491697
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Entry
116491697 CDS
T07966
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aful03016
]
116491697 (TRMT13)
Enzymes [BR:
aful01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
116491697 (TRMT13)
Transfer RNA biogenesis [BR:
aful03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116491697 (TRMT13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Motif
Other DBs
NCBI-GeneID:
116491697
NCBI-ProteinID:
XP_032047766
UniProt:
A0A6J3D8I7
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Position
8:complement(28984301..28991383)
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AA seq
461 aa
AA seq
DB search
MAAPQPELEPEPGRCAYFVARKKRFCRMVPALGRRFCGEHGQQEKENDRKRIPCPLDPKH
TVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDVAEIPEKQVTLSSLSKEELENLIIK
LKKATNGLELDLKEQILSHKALHEALNDPKNGESAFKHLKQQASILGNMEKLHLLGPGRC
FIEFGAGRGKLSHWVDVALQDVEDIQFLLVERATTRFKVDGKHKKRDSVFERLQVDIQHL
CLNKVPSLEKKRLPVVGIGKHLCGAATDLALRCLIESYATCCEGENEEPAAKRPKNDKTE
MAARSSADSERNKEDFKPVAGIVIALCCHHKCDWTHYVGREFFQSVGLGPVEFHYFQRMS
SWATCGMRETVTSTSEESEDHTNNTEEHDQPYSKTESGFDTLQGLPVEERKEIGALCKLL
IDHGRIKYLQQRGYRATLQYYTESAVSLENVLLTAVPEPTT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgcagccggagctggagccggagccgggccggtgcgcctacttcgtggcg
aggaagaagcgcttctgcaggatggtgccggccctcgggaggcgcttctgcggggagcac
gggcagcaggagaaagaaaatgacagaaaaagaattccatgtcctcttgatccaaagcac
actgtatatgaagaccagctacaaaaacatttgaaaaaatgcaattcaagagagaagcca
aagccagtctactttgttcaagatattaacgcaggtttaaaagatgtagcagaaatacca
gaaaaacaagtaacactttcttccctatccaaagaagagttagagaatttaattatcaag
ttgaaaaaagcaactaatggtctggaacttgaccttaaggaacaaatactgtctcacaag
gctttacatgaagccttaaatgacccaaagaatggagaatctgcttttaaacatttgaaa
caacaggcttccattttaggtaacatggaaaaattacatttgcttggtccaggaagatgt
tttattgagtttggagctgggcgaggaaagctgtctcattgggttgatgttgccttacag
gatgttgaagatattcaatttttgcttgtggaaagggcaactacaagattcaaggtggat
ggaaaacataaaaagagagattctgtatttgaaaggcttcaagttgatattcagcactta
tgcttaaataaggtacctagtttagagaagaaaagactacctgtggtaggaattgggaaa
catttgtgtggggctgccacagatctcgctttaagatgtttgatagaaagctatgcaact
tgctgtgaaggagaaaatgaagagcctgcagcaaaacgtcctaagaatgataagacagaa
atggctgctaggagttcagctgatagtgaaaggaacaaagaagactttaagcctgtagct
ggaattgttattgcactgtgttgccatcacaaatgtgactggacacactacgtaggaaga
gagttcttccaatcagtaggacttggaccagtagaatttcattattttcagagaatgagt
agctgggccacttgtggcatgcgagaaaccgtaacctctactagtgaagaaagtgaagat
cacactaacaacacagaagaacatgaccaaccatacagcaaaacagagagtggttttgac
actctgcaagggctacccgttgaagagcgaaaggagattggtgccctctgtaaactgctg
attgatcatggacggatcaaatatttacaacaacgaggatacagggctacactacagtat
tacacagagtctgctgtatccttggagaatgtcctgttgactgctgtcccagagccaact
acatga
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