Aythya fuligula (tufted duck): 116491716
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Entry
116491716 CDS
T07966
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116491716 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116491716 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aful00536
]
116491716 (TNR)
Glycosaminoglycan binding proteins [BR:
aful00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116491716 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
Pur_ac_phosph_N
EGF_2
Lzipper-MIP1
Big_5
Motif
Other DBs
NCBI-GeneID:
116491716
NCBI-ProteinID:
XP_032047797
UniProt:
A0A6J3DEL4
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Position
8:complement(19913544..19972160)
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AA seq
1355 aa
AA seq
DB search
MGTDSENPVLRNVLLSFNLLLLGTVLKPFECRLEVTTEPAERPAVDEEGGLANCSPPIKE
QPMVFHHIYNINIPLDSCCSSMLKPSAEEVSSEDDRLAEYTEQTSDSESQVTFTHRINLP
KQACKCSTSLPSLQELLSRIEMLEREVSMLRDQCNSNCCQENAATGRLDYTLPCSGHGNF
SLESCRCVCSEGWAGSNCSEPRCPRGCSSRGVCLEGQCVCDNDYGGEDCSQLRCPAGCGA
RGLCVDGECVCEEGFAGEDCSQPRCPRDCSGKGYCTNGTCVCVEGYAGEDCGWLRCPNAC
SGRGICQDGICVCEDGYGGQDCSAVAPPENLRVTGITDGSIELAWDSPGAATEYVISYQP
AGPGVTQLQQRVPGDWSTITITELEPGVAYNVSIYAVISDVLSIPVTAKVTTNLATPQGL
KFKTITETTAEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKDQARSPPASDSVSTLIDGPTQILVRDVSDTVAFVEWTPPRARVDAILLKYGLA
DGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESRPALAQFTTEIDAPKNLR
VGSRTPASLELAWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLTDLVPGTE
YGIGITAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLAWTKAMGPIDHYRVTFT
PASGMASEVTVSPEKSQLTLSELEPGTEYTITIIAERGRQQSLEATVDAFTGVRPITQLH
FSQLTSSSVNITWSDPSPPADHLVLTYSPRDEEAAQRLVLDGTLKHASLTGLRPSTEYLV
SLVAVHGAVSSEPVVGSITTGMDAPKDLRVGNITQDSMIVYWSPPVAAFDHYRISYRANE
GRTDSAAIASDATEYSLHRLQPATKYEIGVKSVRGREESEVASITTYTAMDAPLGVTATN
ITPTEALLQWNPPLMDVESYVLVLTRHAVAGETILVDGTNQEYQLTNLLPSTTYTVVMYA
TNGPLTSQTISTNFTTLLDPPSNLTASEVTRRSALLSWLPPVGEIENYIMTYRSTDGSRK
ELIVDAEDTWIRLEGLSETTEYTVRLQAAQNAMRSGFISTTFTTGGRIFANPQDCAQHLM
NGDTLSGVYTISINGDLGQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGN
LEDEFWLGLDNIHKITSQGRYELRIDMRDGQDAAYAYYDKFSIGDSRSLYKLRIGDYNGT
SGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGEARHSQGINW
YHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacagtgaaaacccagtgctgaggaacgtgctcctcagcttcaacttgcta
ctgctgggcaccgtcctcaagcctttcgagtgccggctggaggtgacaacagagccagcc
gagcggccagccgtggatgaggagggtggtcttgccaactgcagtccacccatcaaagag
cagcccatggtcttccaccacatctacaacatcaacatccccctggacagctgctgctcc
tccatgctcaagccttcggccgaggaggtgagttcagaagacgacaggctggcggagtac
acggagcagacctccgacagcgagagccaggtcaccttcacccacaggattaacttgccc
aagcaggcctgcaagtgctccacctccctcccgtccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatgctccgcgaccaatgcaactccaattgctgccaa
gaaaatgcagccacagggcgcctggattacaccctgccgtgcagcggccatgggaacttc
agcctggagtcgtgccgctgcgtctgcagcgagggctgggctggcagcaactgctcggag
ccccgctgcccccggggctgctccagccgtggcgtctgcctggagggccagtgcgtctgc
gacaacgactacggcggtgaggactgctcccagctccgctgccccgccggctgcggtgcc
cgcgggctctgcgtggatggagagtgtgtctgcgaggagggcttcgctggggaggactgc
tcccagccccgctgcccccgtgactgctcgggcaaggggtactgcaccaacggcacctgt
gtgtgcgtggagggctatgccggagaggactgcgggtggttgcggtgtcccaacgcctgc
agtggacgtggcatctgccaggatggcatctgtgtctgcgaggatggttatggagggcag
gactgctcagcagtggctcctcccgaaaacctgcgcgtgacggggattaccgacggctcc
atcgagctggcgtgggacagccctggagcagccaccgagtacgtcatctcctaccagccg
gcggggccgggggtgacccagctccagcagcgggtgcctggggactggagcaccatcacc
atcacagagctggagccaggcgtcgcctacaacgtcagcatctacgcggtcatcagcgat
gtcttgagcatccctgttaccgccaaggtgacaaccaacttggccacaccgcaggggctg
aagttcaagaccatcacagagacaacggcggaggtgcagtgggagcccttctcctttccc
tttgatggctgggagatcagcttcatccccaagaacaacgagggcggtgtgatcgcccag
ctccccagcaccgtcaccaccttcaaccagacagggctgaagccgggtgaggagtacacc
gtcaccgtggtggccctcaaggaccaagccaggagcccccctgcctccgacagcgtctcc
accctcatcgacggcccgacgcagatcctggtgcgggacgtctccgacacggtggccttc
gtggagtggacgcccccgcgtgcccgggtggacgccatcctgctgaagtacgggctggcg
gacggggagggcgggaggaccaccttccgcctgcagccccccctcagccagtactccctg
caggccctgcgccccggtgcccgctaccacctcgccgtcagcgccctccggggtgccaac
gagagccggccggccctcgcccagttcaccacagagattgatgcccccaagaacctgcgg
gtgggctcacggacacccgccagccttgagctcgcctgggacaacagcgaggcggaggca
cacagctacagggtggtctacagcaccctagctggagagcactaccatgaggttctggtg
ccacgggacactggccccaccacccgggccaccctcacagacctggtgccggggacagag
tatggcattgggattacggccgtgatggatagccagcagagcgtgccagcgaccatgaac
gccagaaccgagcttgacagcccccgtgacctcctggtgacggcctccacggagacatcc
atctcactggcctggaccaaagccatgggtcccatcgaccactaccgagtcaccttcacc
cctgcctcagggatggcctctgaagtgacagtgtccccagaaaagtcacagctcaccctc
tcggagctggagcccgggacagagtacacgatcaccatcatcgctgagaggggacgtcag
cagagcctggaggccaccgtggatgctttcacaggggtccggcccatcacgcagctgcac
ttctcccagctgacatcctccagcgtgaacatcacgtggagtgacccgtccccaccagca
gaccacctggtcctcacctacagcccccgggatgaggaggcggcgcagcggctggtgctc
gatggcaccctcaagcatgccagcctgacaggcttgcggccgtccaccgagtacctggtg
tcgctggtggccgtccatggcgcggtcagctccgagcccgtcgtgggctccatcacgaca
gggatggatgcaccgaaggaccttagggtgggcaacatcacccaggactccatgatcgtc
tactggagccctcctgtcgctgcttttgaccactacagaatatcctaccgtgccaatgaa
gggaggacagacagcgctgccatcgctagtgatgccaccgagtacagcctccaccgcctg
cagcctgccacaaagtacgagattggggtgaaaagcgtgcggggccgagaggaaagtgaa
gtggcctccatcaccacgtacacagccatggatgcccccttgggtgtcacggccaccaat
atcacccccacggaggcactgctgcagtggaacccgccgctgatggacgtggagagctac
gtccttgtcctcacccgccacgcagttgcaggagaaacaattcttgtggatgggaccaac
caggagtaccagctgaccaaccttctgcccagcaccacctacacggtcgttatgtacgcc
accaatgggcccctcaccagccagaccatcagcaccaacttcacaactcttttggatcct
ccgagcaacttgactgcaagcgaagtcactcggcggagtgccctcctctcctggttgcct
cccgtgggagagatcgagaactacatcatgacttacagatcgaccgacggcagccgcaag
gagctgattgtggatgccgaggacacatggatccgcctggaggggctttctgagaccaca
gagtacaccgtgcgcctgcaagctgcccaaaacgccatgcggagtggcttcatctccact
accttcaccacaggtggccgcatctttgccaaccctcaggactgtgcccagcacctgatg
aacggagacacgctgagtggcgtctacaccatctccatcaacggggacctcggccagcgg
gtgcaggtgtactgcgacatgaccacagacgggggcggctggattgttttccagaggcgg
cagaacggactgaccgatttcttccggaaatgggcagattaccgcgtcggcttcggcaac
ctggaggacgagttttggctgggcctggacaacatacacaagatcacatcccaggggcgc
tatgagctgcgaatagacatgagggatggtcaggacgcggcgtacgcctactacgacaag
ttctccatcggcgactccaggagcctctacaagctccgaataggagactacaatggcact
tctggggactccctcacctaccatcagggccgccccttctccaccaaggacagagacaat
gacgtggctgtgaccaactgtgccatgtcctacaagggggcctggtggtacaagaactgc
catcggaccaacctcaatggcaagtacggagaggcccggcacagccagggaattaactgg
taccattggaaaggccacgagttctccatccccttcgtggaaatgaagatgcgaccttac
aaccaccgtaacatctctgggaggaagcgacggtccctacagctctga
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