Aythya fuligula (tufted duck): 116491843 Help Entry 116491843         CDS       T07966                                  Symbol POLQ Name (RefSeq) DNA polymerase theta   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism aful  Aythya fuligula (tufted duck) Brite KEGG Orthology (KO) [BR:aful00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:aful03400]     116491843 (POLQ) Enzymes [BR:aful01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      116491843 (POLQ) DNA repair and recombination proteins [BR:aful03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     116491843 (POLQ) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Helicase_dom4_arc DEXQc_Suv3 Motif Other DBs NCBI-GeneID:  116491843 NCBI-ProteinID:  XP_032048127 UniProt:  A0A6J3DFE9 LinkDB All DBs Position 1:84533587..84593592 Genome browser AA seq 2606 aa AA seqDB search MARREDGGAPANGGGAAAAPGAGRGAPLGPHVPGPAVLSPPPGLQRSLHGSGSPGKYQQV NVPEDQADKLLLASWGLPKAVLEKYHSLGVVQMFEWQAECLMLGQVLEGKNLVYSAPTSA GKTLVAELLILKRVLETRKKALFILPFVSVAKEKKCYLQALFQEVDVKVEGYMGSISPAG RFSSLDVAVCTIEKANGLINRLIEENQMDSLGVVVVDELHMLGDSHRGYLLELLLTKVRY VTEKAAKRRTKTTGHGFGGVQIVGMSATLPNLGVLASWLDAELYCTDFRPVPLMEWVKIG NNIYDSSMNLVREFQPKLQLKGDEDHIVSLCYETVCDGHSVLLFCPSKNWCEKLADIIAR EFYSLQQAESCARNSSLSPVVVDREGIDEVLDQLKRSLSGLDSVLQRTLPWGVAFHHAGL TFDERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPMFGGKLLDILTYKQMAGR AGRKGVDTEGESILVCKPSERSKGTALLQGSLKPVCSCLLRREGEGVTSSMKRAILEIIV GGVANTPSDVQTYASCTLLASSLSSSKWRNEKQQDKAQTGPIEACVAWLLENEFIQVLDS GDDEKAKVYHPTHLGSATLSSSLSPTEAMEIFADLQRAMKSFVLENDLHIVYLVTPVYEE WTTIDWYQFFCLWEKLPASMKRVAELVGIEEGFLARSVKGKIIAKTEKQHRQMAIHKRFF TSLALLDLISEVPLKDMTKKYGCSRGQLQSLQQSAATYAGMVTVFCNRLGWHNMELLLSQ FQSRLTFGVQRELCDLVRVSLLNAQRARMLYNAGFVTVADLAKASPGDVATALKNSVPFK SGRKAVDEDEESAEERRTVRSIWMAGMKGLTESEAAFLIVEEARGLLQQDLALMGVQWNP ESFLESDSSSMISSASELEDRPCRSNGEQSSESSRVLNKKVCRDQHHNSLGSQVGNVSNI KKGCKRRLSGSTANSRFESQVPCKKQAPAEERNDDTVHSARKRLNMSKGIENGEGISQVK NEVGSRRAIPELPTEQGKTPTLRKMSSASRLIRSMDAHLNRTRNKNTVSKLQSSLLEDSS MLNINKEKPSTFHPSISKDNFFSDQNNKEFLEKRSVAHRVSNSVQINGGRKDKMEELFTE PSTSNEGVPKGKGCFQATVILQGTPRVNTEMHDAVENPVVPATARMQRNKYIDDRQNKVN KMQKDVSCAEATTAKQHSALGTDHCNVCASCSGNECVHNSSRKQKPAHFCPGGAKSCHVQ IQSGAKNRSEKPNGILLQAGVLQKGNSHPKDFLKDSLVNSRAVCDADGVQNGSSSAPFCD CRDFEDSLQLDTQTESIIKQAAAGITGQQGTEGSELAAVPQQETSRKLRTLQTENATGGR LAATVRKLGLSSLITTSNIIKSTDQHCSNKVLESGDSNVLPIAKETEPAPFLKESDFSVT DSQLHSFLQDYQTQNSVKEEGASKGPNKATSPLGREQEQVKCHPVTETSLNMSDSLLFDD SFSNVSDLSAMQAVEADRKEPAGRQGALLPADGLLQNVRPAQNKSDVSNNQKEHEDPAQC NDASLAFSDLIAEVLDHENSPSFLGDPTSPFHGQSRLRNPVICNNDPNPKVLVVDQGEKL QSSQQTLEEKTHPVACTDHSFELSPGLQDVLDKWPSPSGIEPVSVNLQSSCLKGKLVASI AKQEPDAVFEFDRHQAEPLPNCQDLKDHYRIKENKAEDLDVQKSDCVTLKLKGSNRTSCP PPDNCNGFIPPTPPKEHFPQSSGSLSVKSTRKRQVACVKEGQLIEPQQNSKSDAEQQVKK LQFNLESVDPIETDEIRDDSTIDQGFSLQLSQDAFPLIPLSAESFTIIDVASDKVLFQTF LAEWKEKSRFSISVACERTERLVSPKSTIGGRFKQGSSPQRMQAKDDGFPIQGCEDILVV GLAVCWGGKDAYYISLQQMQDQNEISLSLAPPPLDKNLSVTERLQHLQLYLQKKQERSLV VYNFIQHYKTLVMACGISLEGSFEDPKVACWLLDSGSKERTLHSMVTTFLPNELPLLEGV GTGQGVQSLGLSASRDHSGRYRAAIESVLIFNVMNQLHDELQKQNLTDVFSKVEMPSHYC LALLELNGIGFSTAAYETQKQVMQAKLTEIETKAYQLAGHSFSLTSPDDIAEVLFLELKL PQNGDVTVQRNKKTLGYTRRTSAKGNLVRLSKQFSTTKDVLEKLKTLHPLPGLILEWRRI NNAITKVVFPLQREKRLHSVLGMERIYPVSQTHTATGRVTFTEPNIQSVPRDFAIEMPTV VEESPPFRAVYSRAVCGSRGRRHSSMLPNGVNIQDEDRSKGRGIPFSVSMRHAFVPFPGG LILSADYSQLELRILAHLSHDCRLIEALNRGSDVFKSIAAEWKMIDPEAVGDSTRQQAKQ ICYGIIYGIGAKSLGEQMGIDENDAATYIESFKSRYTGIQKFLRETVRSCRRDGFVQTIL GRRRYLPAIGDPNPYSKAHAERQAVNTTVQGSAADIVKTATVNIQRRLEAFSSVIKSHGH LESSFQRDKTGRLSRKRNRGMLHPITGGFFILQLHDELLYEVAEDDVIQVAQIVKHEMEN AVKLSVKLNVKVKIGPSWGDLQDLEL NT seq 7821 nt NT seq  +upstreamnt  +downstreamnt atggcgcggcgggaagatggcggcgcccccgctaacggcggcggggcggccgctgccccc ggggccgggaggggggcaccgctcggccctcatgtccccggcccggccgtgctgagcccc ccgcccggcctccagcgctccctgcacggcagcggctctccaggaaaataccagcaagta aatgttcctgaagaccaagcagacaagttgctcctcgcaagctggggtcttccgaaagca gttctggagaaatatcacagtctgggagtagtgcagatgtttgaatggcaagcagaatgc ctaatgcttggacaagttttggaaggaaagaacctggtttactcagctcctaccagtgcc ggaaagactcttgttgcagaattgctcattctgaagcgagtcttggagacccgtaagaag gctcttttcatccttccctttgtctctgtggccaaggagaagaaatgttatctgcaggcc ctgtttcaggaggtggatgtgaaagttgaaggctacatgggaagcatctctccagctgga cgtttctcttctctggatgttgctgtctgcaccattgagaaagccaatggcctcatcaat aggctaatagaagaaaaccaaatggactcactaggagttgtggttgtggatgagttgcat atgctgggagactctcatcgaggatatctgttggagctccttctgaccaaagttcgatac gtgacagagaaggctgcaaaacgacggacaaagacaaccggccatggttttggaggggta cagatagtaggcatgagtgctaccctccctaacttgggagtgctagcctcgtggttagat gcagagttgtactgtacggattttcgccctgtgcccctcatggagtgggtgaaaattggc aacaacatttatgactcttccatgaacctggtgcgagaattccagcccaaacttcaactg aagggagatgaagaccatattgtgagcctgtgttatgagactgtttgtgatggccattca gttctgctcttctgtccatccaagaactggtgtgagaagctggcagacatcattgccagg gaattctacagtttgcaacaagctgagagttgtgcaagaaactcatccctttccccagtt gttgtggacagagaaggaatagatgaggtcctggatcagctaaagcgctctctttcaggt ctggattctgtgctccaacgtactttgccatggggagtggcatttcatcatgcaggtctt acttttgatgaacgggacataattgaaggagcctttcgccaaggcttgattagagttcta gcagcaacatccactctctcttctggagtgaatttgccagcacgccgagtaattatacga actcccatgtttggtggcaaactgctggacatcctcacttacaagcagatggctggcagg gctggcaggaagggagtagacacagagggtgagagcattttagtttgcaagccctcagaa agatcaaaaggaactgctctacttcagggatctctcaagcctgtttgcagttgtttgctt agaagagaaggggaaggtgttacttcaagcatgaagcgagcaatacttgagatcatagtg ggaggagtggccaacactccaagtgatgtgcagacctatgcttcttgcactcttctggca tccagcttgagcagtagcaagtggagaaacgagaaacagcaagacaaagcacagactgga cctattgaggcttgtgtagcatggctgctggagaacgaattcattcaggttctggactct ggcgatgatgagaaagcaaaggtttatcatcccacacatcttggctcagctactctttcc tcttctctttcaccaactgaagccatggaaatttttgctgacctgcagcgagctatgaaa agctttgttctggagaacgatctgcatattgtctatttggttaccccggtgtatgaggag tggaccacaattgattggtaccagtttttctgcttatgggagaagctgcctgcctcaatg aaacgtgtggctgagctggtggggatcgaagaaggctttctggcccgctctgtaaaaggc aaaatcatagctaagacagagaaacagcacagacaaatggcaatccacaaaaggtttttc actagtcttgcccttctggatttaatcagtgaggttcccttaaaagatatgaccaagaaa tatggttgcagtcgtggccagcttcagtccttgcagcagtctgctgccacctatgcagga atggtaacagttttctgtaatcgactgggctggcacaacatggagctgttgctctctcag ttccagagccgcctcacttttggggttcaaagggagctttgtgacctggtacgagtctct ctgctgaatgcccagcgtgccaggatgctgtacaatgctggctttgtcacagtggctgat cttgctaaagccagtcctggtgatgtggcaactgctctgaagaattcggtaccattcaaa agtggtcgtaaggctgtggatgaagatgaagaatcagcagaggagcgtcggactgtgcgc agcatctggatggctggaatgaagggtttaactgaaagtgaagcagctttcctcattgtg gaagaagccagaggacttctccagcaggatttggcactgatgggagtgcagtggaaccca gagtcttttcttgagtctgattcatcctctatgatcagcagtgcgtcagagctggaagac agaccgtgtagatcaaatggagagcagtcttctgagtcttctagggtgttaaacaaaaaa gtgtgcagagatcagcatcataatagccttggttctcaggttggaaatgtatcaaatatt aaaaagggatgcaaaaggcgactaagcggtagtacagcaaactccagatttgagagccaa gtcccatgtaagaaacaagctccagcagaggaaagaaatgatgacactgtgcacagtgct agaaaacgtctcaatatgagcaaaggtattgaaaatggggaaggaatttctcaggtcaaa aatgaggtaggttccaggagagcaattccagaactccctaccgagcaaggaaagacacca acactgagaaaaatgtcttcagcttctagactgataagaagtatggatgcacatttaaac cggactaggaacaaaaatactgtttcaaaactgcagagctcactacttgaagattcaagt atgcttaacataaataaagaaaagccttctaccttccaccccagcatttctaaagataat tttttttcagaccaaaataataaggaatttttagaaaaaaggtccgtagctcacagagtc tcaaattctgtacagattaatggtgggaggaaagataaaatggaggagctgtttacagag ccttccacctcgaatgaaggtgtgcctaagggaaaaggatgttttcaggcaactgttata ttacagggtactccacgtgtcaacacggagatgcacgatgctgtagaaaatccagtagta cctgctactgctagaatgcagagaaacaaatatattgatgataggcagaataaagtcaat aaaatgcaaaaagatgtgagctgtgctgaggcaacaactgctaagcagcactctgcttta ggcacagatcactgtaatgtgtgtgctagctgctctggaaatgaatgtgtccataacagc agcaggaaacagaagcctgcacatttttgtcctggtggtgctaaatcctgccatgttcag atccagagtggtgccaaaaatcggagtgaaaaacccaatggaatattgttacaagctgga gtactacagaaaggcaacagtcatcctaaggattttctgaaagactctttagtaaattcc agagctgtttgtgatgcagatggtgttcaaaatggttcgtcctctgctcctttttgtgac tgtagagactttgaagacagcttacagttggatactcagactgagagcataataaaacag gcagcagctggaatcacaggacagcagggaacagagggttcagagctggcagcagtacca cagcaggaaacctccaggaaactaaggactttgcagactgaaaatgctactggtggaagg ctagctgcaacagtaaggaaactgggcttatcaagtcttatcacaacgagtaatattata aaaagcacagatcagcactgcagtaacaaagttttggagtctggagactcaaatgtactg cccatagcaaaagaaacagaacctgcaccttttcttaaagaaagtgatttctcggtgact gactcccagctgcacagtttcctacaagattaccagacccaaaattcagtgaaagaggaa ggtgcttctaagggtcctaataaagcaacctcccctcttggtagggagcaagaacaagtc aaatgccatcctgtcactgaaacgagcctgaatatgagtgacagcttgctgtttgatgat agcttcagtaatgtcagtgatctttcagctatgcaagccgtggaagctgacagaaaggaa cctgcgggaaggcagggggctttgcttcctgcagatggtctcttgcagaacgtaaggcct gctcagaataaatctgatgtcagtaacaatcagaaagagcatgaggatccagcacagtgt aatgatgcctctctagccttctctgatctcattgctgaagtgctggatcatgagaactcc ccatcttttctgggagatcctacttctccatttcacggtcagtcccgattaagaaaccca gtgatttgtaacaatgaccccaatccaaaggttttagtagtggatcaaggtgaaaagctc cagagcagccagcaaactttggaagagaaaacccatccagtggcatgtactgaccactcg tttgaactgagcccaggactgcaggatgtattagacaaatggcctagcccttcaggcatt gaaccagtttcagtaaatctacaaagctcctgtttgaaagggaagttggttgcttctatt gctaagcaagagccagatgcagtgtttgaatttgatcgtcatcaggcagagcctttgccc aactgccaggatttaaaagaccattacagaattaaagaaaacaaagcagaagacttggat gttcagaaatcagactgtgtaacacttaagctcaagggaagcaacagaacatcctgtcct ccaccagataactgtaatggctttattcctccaacaccccccaaagaacattttccccaa agttctggatctctctccgtgaaatctacaaggaagagacaagttgcctgcgtgaaggaa gggcaactgattgagccacagcagaatagcaaaagtgatgcagagcagcaggtaaaaaaa ctccagttcaatttggagagcgtagacccaattgagactgatgagataagagacgattcc actatagaccaaggcttttcgctgcagctgtctcaggatgcttttccactcattccctta agtgctgaaagtttcactatcattgacgtagctagtgacaaagtacttttccagactttt cttgcagagtggaaggagaaaagcagattctccatctcagtggcatgtgaaaggacagaa cgtctggtgtcgcccaaatcaacgattggtggcagattcaaacaaggaagttctccccag agaatgcaagctaaagatgatggatttcccatccaaggctgtgaagacatcttggtagtt ggactggcagtgtgttggggaggaaaagatgcctactatatctccttacagcagatgcaa gaccagaatgaaatcagcctgagtttggcaccaccgcctttggacaaaaacctgtctgta acagagagattgcagcatctgcagctctacctgcagaagaagcaggagcgctcacttgtc gtgtataacttcattcagcactacaagaccctggtgatggcttgtggcatctccttggaa ggaagttttgaggacccaaaggttgcatgttggctgcttgattctggctctaaggaacgt acacttcacagcatggtgactacatttctacccaatgagctacctctactggaaggagta ggcactggccagggagtgcaaagcctggggcttagtgccagcagagatcattcagggcgg tacagagcagcaatagaatctgtgctcatcttcaacgtcatgaaccagctccatgatgaa ttacagaagcaaaatctgacagatgtgttttctaaagtggagatgcccagccattattgt ttggctctgctggagctgaatggcattggctttagcacagcagcatatgaaacccagaaa caggtcatgcaagctaaactgactgagattgagaccaaggcatatcagctggctggccac agtttctccttgaccagccctgatgacattgcagaggttttgttcctggagctgaaactg ccacaaaatggagatgtgacagttcaaagaaacaagaaaactctgggttacaccagaaga acatctgctaaaggaaacctggttaggttgagcaagcagttcagtacaaccaaggatgtt ttggagaaattaaagacacttcaccctttgccggggctcatactagaatggaggaggatc aacaatgccattacaaaagtggtgtttccgctacagagggaaaaacgattgcattcagtc ctgggaatggaaaggatatatccagtgtcacagactcacacagctacaggtcgagtaact ttcacggagccaaatatccagagtgtgccaagagattttgccattgaaatgcccactgtg gttgaagaaagcccaccctttcgagctgtttattctcgtgctgtttgtggcagcagaggt agaaggcattccagtatgttgcctaatggtgtaaatattcaggatgaagacagatctaaa ggaagaggaatcccattttctgttagcatgcggcatgcctttgttcccttcccaggtggc ttaatcttgtctgctgattactctcagcttgaactgaggatccttgctcatttgtctcat gactgtcgactcattgaagccttgaacaggggttctgatgtctttaagagcattgcagca gaatggaagatgattgatcctgaagctgttggagacagcaccagacaacaagctaaacag atttgctatggaatcatctatggaataggagcgaaatctttaggcgagcagatggggatt gatgaaaatgacgctgccacttacattgaatccttcaaatcaagatacacagggattcag aaattcttgagggagacagtaaggagctgcagaagagatgggtttgtgcagaccatcctg ggaagacggagatacctgccagctattggagatccaaatccctacagtaaagctcacgca gagcgtcaggctgtaaatacaactgttcagggatctgctgcagacattgtcaaaacagcc actgtgaacattcagagacgcctggaagctttctcttctgtgatcaagtcccatgggcac ctggagagctcattccaaagagataaaacaggaaggctatccaggaagagaaacagaggg atgctacatcccatcaccggaggtttctttatcctccaactccatgacgagctcctctat gaagttgcagaggatgatgtgatccaggtagctcagattgtcaagcacgagatggaaaac gctgtcaagctctcagtaaaactgaatgttaaagtgaaaattggacctagctggggagac ctgcaggacctggagctgtag

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