Aythya fuligula (tufted duck): 116492310
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Entry
116492310 CDS
T07966
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116492310 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116492310 (DHX36)
03012 Translation factors [BR:
aful03012
]
116492310 (DHX36)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116492310 (DHX36)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116492310 (DHX36)
Translation factors [BR:
aful03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116492310 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Sir1
Motif
Other DBs
NCBI-GeneID:
116492310
NCBI-ProteinID:
XP_032048769
UniProt:
A0A6J3DE13
LinkDB
All DBs
Position
9:25454491..25473396
Genome browser
AA seq
983 aa
AA seq
DB search
MSSEQRRGWARGGDGGPAASSSAGGHGGRGGGGGGGRGRHPSHLKGREIGLWYARKQGQR
SKETDRQQRAVVRMDERREEQIAQLLTAVQSRSEKEPDAMSWWSGDEDGNTPEQPAKVKP
EVEKAPIKQRPVLEKTFLDRDVEYLFEKNQQDTDLDEQLKEDLRKKKSDPRYIEMQRFRE
KLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPR
RISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIH
IPGFTFPVVEYLLEDVIEKLRYMPENTDRRPRWKKGFMQGHISRPEKEEKEEIYRERWPE
YLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLH
DLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARR
KELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHL
LAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
TVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPARIAQLVKNLRQELDDLLQEKIENPHPVDWNDTKSRDTAVLTAIID
LITTQENESARNYAPRFQNERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggagcagcggcgcggttgggcccggggcggcgatggcggccccgcagcctcc
tcctcggccggcgggcacggggggcgcggcgggggcggcgggggaggccgggggcggcac
cccagccacctgaagggccgcgagatcgggctgtggtacgcgcggaagcagggccagagg
agcaaggagacggaccggcagcagcgggccgtggtgcggatggacgagcgccgcgaggag
cagatcgcgcagctgctgacggccgtgcagagcaggagcgagaaggagcccgacgccatg
tcctggtggtccggggacgaggacggtaatactccagaacagcccgcaaaagtgaaacca
gaggtggaaaaagctcctatcaaacagagaccagtcttggaaaaaacattccttgatcgg
gatgtggaatacctatttgaaaaaaatcagcaggatacagatttagatgagcaacttaaa
gaagatctaagaaagaagaagtctgatcctagatatattgaaatgcagagattccgagag
aaactcccttcgtatgggatgagacaggaacttgtaaaccttataaataataatcgagta
actgtgataagtggtgaaaccggctgtggaaagactacacaagtcacgcagttcatcttg
gatgactacatagagcgagggaaggggtctacctgcaggatcgtttgtactcagcctcgg
aggatcagtgctatctcagtggctgagagagttgctgctgaaagggcagaagcatgcggt
aatggcaagagtacaggatatcagattcgtcttcagagtcggttaccgaggaaacaaggc
tcaattttatactgtaccacaggaattgtcctacagtggcttcagtcagataagcatttg
tccagtattagtcatgtagtccttgatgaaattcatgaaagaaatcttcaatcagatgtt
ttaatgagcattattaaagatcttttgaatgtccgtttggatctgaaagtaatactgatg
agtgctactttaaacgcagagaagttttctgaatactttgataattgtccaatgattcac
atacctgggttcactttcccagtggtggagtatcttcttgaagacgtaattgagaagttg
aggtatatgccagaaaacacagaccgtcggccacggtggaagaaaggcttcatgcaaggg
catataagcagaccagaaaaagaagaaaaagaggaaatctacagggaacgatggccagaa
tacttaaggcagctgcggggcaggtactcagcgagtactatagatgccttggaaatgatg
gacgatgacaaggttgaccttgaccttatagcagcacttatcagacacattgttttggaa
gaagaggatggtgcaattctagtgtttcttccaggatgggacaacattagcactttgcat
gatctcttgatgtcacaagtcatgtttaagtcagataggtttattatcatacctttacat
tcattgatgcctactgttaaccagactcaggtgtttaagaagaccccgccaggagtaagg
aaaatcgtgattgctaccaacattgcagagactagcattacaatagatgacgtggtattc
gttatagatggtggaaagataaaggaaactcactttgatacccagaacaacattagcaca
atggcagctgagtgggttagtaaagctaatgccaagcaaaggaaaggtcgagcaggaaga
gttcaaccaggtcactgttaccatctatacaatgggctccgtgctagccttctagatgat
tatcagctacctgagatcttgaggacacctttggaagaactttgcttgcagatcaagatt
ctaaagcttggaggaattgcttattttctgagcaaactaatggatccgccatctcgtgat
gctgtaatgttggccataaatcatctgatggagctgaatgctttggacagacaagaagag
ctgactccactaggtgtacatttagcacgattaccagttgaaccacatatcggaaaaatg
attctctttggagctttattctgttgcttggatccagtccttacgattgcagcaagcctc
agcttcaaagacccttttgtcattcctttgggcaaggagaaagtagcagatgcaagaaga
aaggaattgtcaaagaatacaaaaagtgatcatctgacagtggtaaatgctttcacgggc
tgggaagagactcggcgccgtggattcagaactgagaaagactactgctgggaatatttc
ctgtcttcaaatacactccagatgcttcataacatgaaaggacaatttgctgagcatctc
cttgcagctggatttgtgaatagcagagaccccaaggatcccaaatctaataccaactcg
gataatgagaagttgctcaaagcagtcatctgtgctggtttatatccaaaagttgcaaag
attcggccaagctttagcaaaaagagaaaaatggtgaaagtttgcactaagacagatgga
acagttaatattcatcctaaatctgttaatgtggaagagacagagttccattacaactgg
cttgtgtaccatttgaagatgagaactagcagtatttacttatatgattgtacagaagtc
tctccgtactgcctcttgttctttggaggggatatatccattcagaaggataaagatcag
gataccattgctgtggatgaatggattgttttccagtctccagctagaatagcacagtta
gttaagaatttaagacaagagctcgatgatctactacaggaaaaaatagaaaacccacac
cccgtggactggaacgacactaaatccagggatacagcagtactgaccgctattatagac
ttaatcacaacgcaggagaatgaaagtgccagaaactatgctccacggtttcagaacgag
cgctatagttga
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