Aythya fuligula (tufted duck): 116492344
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Entry
116492344 CDS
T07966
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116492344 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aful04121
]
116492344 (MID1)
Enzymes [BR:
aful01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116492344 (MID1)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116492344 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
TRIM_CC
zf-C3HC4
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
116492344
NCBI-ProteinID:
XP_032048862
UniProt:
A0A6J3DH69
LinkDB
All DBs
Position
1:130387556..130625791
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AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEDCLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccctgcgctcacagcctctgcttcaactgcgcgcaccgcatcctcgtctcc
cactgcgccaccaacgagccggtggagtctatcaccgccttccagtgccccacctgccgc
tatgtcatcaccctcagccagcgtggcttagaggggctcaagcgcaacgtcaccctgcag
aacatcatcgaccggtttcagaaagcctcggtgagcgggcccaactcccccagcgagacc
cgccgggagcgggcttttgacagcaacagcatgtcgtcctgcgagaaggtcctctgccag
ttctgcgaccaggaccctgcccaggaggcagtgaagacctgtgttacctgtgaggtctcc
tactgcgaagactgcctgaaagccactcaccccaacaagaagcccttcactggccaccgg
ctgatcgagcccatcccagactctcacatcaggggattaatgtgcttggagcacgaggac
gagaaggttaacatgtactgcgtgactgatgaccagctgatctgtgccttgtgcaagcta
gttggacggcaccgtgaccatcaggtggcagctttaagcgagcgctatgacaagttaaag
caaaatttggagagtaacctcaccaaccttattaagaggaatactgaactggaaactctt
ttggcgaaactcattcagacctgtcaacacgtagaagtaaacgcatcccgccaggaaacc
aagctgatggaagaatgtgaccagctcattgaaataatccagcaaagacgacaaataatt
ggaactaaaatcaaggaaggaaaggttgtaaggttgagaaaactggctcagcagattgcg
aactgcaaacagtgcattgagcgctcaacatccctcatctctcaggctgagcagtctctg
aaggagaacgatcatgctcgcttcctgcaaactgctaaaaacatcactgaaagggtttcc
atggcaactgcatcctcccaggttctaattcctgaaattaatctcaatgatacttttgat
actttcgcacttgattttaccagggagaagaaattattggaatgccttgattatcttaca
gctcccaaccctcccaccattcgagaagagctctgtacagcttcttatgatactattact
gtccactggacatcggatgatgaattcagcgtggtctcttacgagctgcagtacaccatc
ttcactggacaagctaatgttgttagtttatgtaactcagccgacagctggatgattgtt
cccaatatcaaacaaaaccactacaccgtgcatgggttgcagagtggcactaagtacatc
ttcattgttaaggccattaatcaggctggcagcagaaacagtgagcccggcaagctcaag
acaaacagtcagccatttaaactggaccccaaatctgctcacagaaaattgaaagtgtct
catgataacttgacagtggaacgtgatgaaacctcctccaaaaagagtcatacaccagag
cgattcacaagccaagggagctatggagtagctggcaatgtgttcattgacagcggacgg
cattactgggaagtggttattagtgggagtacatggtatgccattggtatttcatacaag
tcagccccaaagcacgagtggattgggaagaactctgcctcctgggtgctctgccgctgt
aacaacacgtgggtggtgcgacacaacagcaaggaaatcccaatagagcccgcacctcac
ctccgccgtgttggcattttgctggactacgacaacggttcccttgccttttatgatgcc
ttgaactccctgcacctttatacctttgacattacatttgggcagcccgtgtgccccaca
ttcactgtgtggaataagtgtttgaccattataactggcttgcctatccctgaccactta
gactcctctgagcagctggcatga
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