Aythya fuligula (tufted duck): 116492371
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Entry
116492371 CDS
T07966
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04136
Autophagy - other
aful04140
Autophagy - animal
aful04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116492371 (ATG16L1)
04136 Autophagy - other
116492371 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116492371 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116492371 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
aful03029
]
116492371 (ATG16L1)
Membrane trafficking [BR:
aful04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
116492371 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
116492371 (ATG16L1)
Mitochondrial biogenesis [BR:
aful03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116492371 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
CFAP251_N
NBCH_WD40
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_IFT140_1st
eIF2A
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_WDR41
Tricorn_2nd
Fez1
INO80F
HEF_HK
ZapB
Nucleo_P87
HTH_6
DUF8181
PALB2_WD40
AP5B1_middle
DUF6383
CC_Bre1
YicC-like_N
CLIP1
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
116492371
NCBI-ProteinID:
XP_032048922
UniProt:
A0A6J3DHB9
LinkDB
All DBs
Position
9:complement(9517786..9538309)
Genome browser
AA seq
624 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAAELRRRDRLQRQAFEEIIAQYNKLLEKSDLHAVLADKLQAEK
YDMQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVETRDDD
IEVLADETSDTAEETSPVRAVSRASSKRLSQPAGGLLDSITNIFGLSESPLLGHQSSDAA
RRRSLSSFPAPQDSAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVK
QTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAV
AWSPAGAHVVSVDKGNKAVLWAEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgccgccggcttccccccctggaagcggcacatcgcggccgag
ctgcggcggcgggaccggctgcagcgccaggccttcgaggagatcatcgcgcagtataac
aaactactagagaagtcagaccttcatgccgtgctggctgataagctgcaagctgagaag
tatgacatgcagagcagacatgagatcagtcccggacatgacggcacatggaatgatgct
cagttgcaggaactggcacagctgaagataaagcatcaagaggagctgacagaactacat
aagaaacgtggcgagttggcccagtctgtaattgatctgaataaccaaatgcagcagaag
gacaaagagatgcagatgaatgaagcaaagattgcggagtatttgcaaaaaatctctgaa
ctggaaacagagtgccaggaattgcgtagcaaactacaggatcttgagcgagctaatcag
acactgaaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaaactg
aggaaaactactgaggataaccaggagctggtctcacgttggatggcagagaaagcacaa
gaagccaatcgcttgaatgcagaaaatgaaaaggattcaaggagacgacaagccaggctg
cagaaggagctagcagaagctgccaaagaacccctgcctgttgaaaccagggatgatgat
attgaagtgcttgcggatgaaacctctgacacagctgaggagacatctccagtgcgagct
gttagccgagcatccagtaagcgactctcccagccagctggaggccttctggactctatc
actaatatctttggtctgtctgagtctccccttttgggacatcaatcttctgatgctgcc
aggagacgttccttgtcctcgttccctgctccccaggatagtgcagagccacatccgggt
gccagtaaagaagtgagagtgcccactactgcaatatgtgtctttgatgcacacgacggg
gaggtgaatgcagtgcagttcagccctggctcccgtttactagcaacaggaggcatggac
cgaagggttaagctttgggaagtcttgggagatagatgtgagcccaaaggttccctctct
ggtagtaatgctgggattacaagcatagaatttgatagtgctggttcttacctcctggca
gcttcaaatgactttgccagcagaatctggacggttgatgacaatcgattacggcacact
ctgacaggtcacagcggtaaagttctgtcagccaagttcttgctggacaatgcacgcatt
gtttcaggaagtcatgaccggaccctcaagctctgggacctccgcagcaaagtttgtata
aaaacagtgtttgcaggatctagctgcaatgacattgtatgtaccgaacagtgtgtaatg
agtggacatttcgataagaaaattcgtttctgggacatcaggaccgaaagcatagtaaaa
gaactggagctgcttgggaggatcacagctctggacctgaactccgagcgaacagagctg
ctgacctgttcccgtgatgatctactaaagatcatagatctgcgggttggtgctgtcaag
caaacattcagcgcccaagggttcaaatgcggctctgactggacgagagttgtgttcagc
cctgatggtaactacgtggctgctggttcagctgatggggccctctacatttggaacgtg
ctcactgggaaattggagaggactcttgcaaagcatcacagttcttctatcaatgcagtc
gcgtggtcgccagcaggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtcctg
tgggctgaattttga
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