Aythya fuligula (tufted duck): 116492458
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Entry
116492458 CDS
T07966
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04382
Cornified envelope formation
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116492458 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116492458 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116492458 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116492458 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116492458 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
aful00536
]
116492458 (COL4A3)
Exosome [BR:
aful04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116492458 (COL4A3)
Glycosaminoglycan binding proteins [BR:
aful00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116492458 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116492458
NCBI-ProteinID:
XP_032049116
UniProt:
A0A6J3DCB4
LinkDB
All DBs
Position
9:complement(3562610..3623026)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAAGGCPGRPLPPLPLLLLLLLLPVLLALLRPGRAAAAESCVCKGKSPCFCDGTKGNKGE
KGFPGVPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGAPGIPGFSGPPGLPGE
PGAAGPPGRSGVPGCNGTKGDQGFPGPPGRRGAPGIPGVTGIKGEKGSPADGYNQRYDAK
GDPGLPGMPGLQGAQGVQGYPGENGPQGPPGTSGMPGRPGPPGPKGLMGIKVIGTKGRKG
DTGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPVGDSQSEKGDRG
EPGAQGKPGKEGAPGPPGLPGQKGEQGKPGMAGRQGAKGIKGNTGPPGACGRTEYYDNVV
GDKGDEGPPGPPGPKGQRGMPGPQGPPGGAGRPGVSRPGLRGPPGFPGPKGKKGEKGQTG
LCIVGPPGLPGITGRPGSVGLPGPPGEPGRVIFRTGPPGHPGEPGYAGPPGPPGDVGMKG
EEAGVCTDCSYVPGTPGLPGSPGPHGQDGIPGREGTQGPKGAPGSPGAPGFPGAQGPPGF
KGDQGHKGSKGEPGYVYPEGPKGEQGDPGSRGDKGRKGSSGFPGRSGPKGYKGSKGEEGL
PGTKGDRGLPGLPGNPGLPGEMGLPGPPGYGPQGIRGFKGSKGVIGPPGLPGEAGLKGET
SRITPLPGLPGPQGPDGLPGPPGVPGRVGTNGQPGDPGHPGPTGDTGFPGLGFPGNPGPK
GDKGLTGGRGSPGCEGKIGEPGRAGNLGQPGEKGDPGMIIHGEPGRLGSPGGRGIPGPKG
DTGFPGLPGLPGRAGHDGDDGLRGDPGSPGIPGDPGFPGKPAECLTGRPGLPGGQGATGP
PGGRGSLGSKGKLGPPGLGIPGIYGKPGEPGLIGLQGNAGLPGFKGQSGRPGIDGVPGPR
GEPGLMGPLGIPGPPGMIGSPGNPGVRGSFGFPGLKGRKGFLGAKGEQGDKGFPGPSETL
VGIGNKGEQGPKGVQGSMGLRGEKGDAGVQGPPGLAGSEGVPGIPGAKGFMGLPGIPGGQ
GFPGAPGDKGNMGIPGSKGQKGSPGFPGPSGDPGPTGYGGFPGEKGDPGHPSPGPPGEPG
PKGDSGAPGLLGSKGEKGSQGQPGHRGVPGPHGVRGETGVAGIPGKPGPPGDVGVKGQQG
RPGQQGIIGPPGAVGYPGENGLAGERGNQGRDGMPGPPGVKGEPGAPGRGIPGLRGVPGR
RGIKGDMGLPGFPGPPGVKGHQGDQGPIGPPGLMGLPGFQGATGMAITGPKGNRGLAGAD
GRPGAPGFQGLPGLPTPSMKGNKGVRGADGIPGPTGPNGDTGPPGPKGIEGRPGYPGARG
DPGFLGFPGVKGEKGNQGPPGPQGAEGPRGPKGQRGPPGVSGRIFSVPGSKGPPGLPGVP
GTPGDQGIQGIPGLQGPKGVKGLPGSFGRPGQPGLPGPKGDRGFPGERGQPGLIGFPGLQ
GLPGSPGTIITGPTRRGFIFTRHSQTTKTPSCPPGTSQIYVGFSLLFVQGNERAHGQDLG
TAGSCLQRFTTMPFLFCNTNDVCSFASRNDYSYWLSAVTAMPVDMAPISGRALEPHISRC
IVCEGPAMVIAVHSQTTVVPACPEGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEF
RAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRKPLPQTLKAGELENIISRCQVCMKR
PV
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgggggctgtcccggccgcccgctgccgcctctgcccctgctgctgctgctg
ctgctgctgccggtgctgctcgccctgctccggccgggccgcgccgcggcggctgagagc
tgtgtatgcaaaggtaaaagtccttgcttctgtgatggcacgaaaggtaataagggtgaa
aaaggcttccctggtgtcccaggtccacctggtcatagaggctttcccggtccagaaggg
cctccagggccacaggggccaaagggttcaccaggacttacgggcttagttggacccaaa
ggtatacggggagctccaggaatacctggattttcaggtcccccaggtcttccaggtgaa
ccaggagctgctggccctcctggacgctcgggtgttccaggatgcaatggcacaaagggc
gatcaaggttttccaggtcctccaggtagaagaggtgctccaggcattccaggtgtcact
ggcatcaaaggagagaaggggtcccctgcagatggatataaccaaagatacgatgcaaaa
ggtgatcctgggttgccaggaatgcctgggcttcagggtgcacagggtgttcaaggatat
cctggggaaaatgggccacagggccctccaggaacttcaggaatgccagggagaccagga
cctcctggacctaagggtcttatgggaataaaagtaataggaaccaaaggaagaaagggt
gacactggattaactggacctcctggaccaccaggaactgttattgtgacattaagtggt
ccagacaacatgacggacttgaaaggagagaaaggggaaaaaggatcaagaggacttcca
ggaccaatggggtttacagggccagttggtgattctcaaagtgaaaagggtgaccgagga
gaacccggagcacagggtaaacctggaaaagaaggtgccccaggtccacctggcttaccg
ggacaaaagggcgaacagggcaaaccaggaatggctggcagacaaggagccaaggggata
aaaggcaacactggtccgcctggagcttgtggtcgaacagagtattatgataatgtagtt
ggtgataagggagatgaaggaccccctggacctccaggaccaaaaggtcaacgtggtatg
cctgggccacagggtcctcctggaggtgctggtagaccaggtgtgtcaagacctggtctg
agaggtcccccgggatttcctggcccaaaaggaaaaaaaggagaaaaaggacaaacaggc
ttgtgcattgtaggccctccaggactacctgggattactggcagacctggttctgttgga
ttaccaggtcctccaggagaaccaggtagagtaatatttagaacaggcccaccaggacat
cctggagagccagggtatgcaggacctccaggacctccaggagatgttggcatgaaaggt
gaagaagctggcgtgtgtactgattgtagctatgttccaggaacacctggtcttcctggt
tcgcctgggccacacggccaggatggcatccctggtagggaaggaacacaaggtcccaaa
ggagctccaggttctccaggagcaccagggtttccaggagctcaaggacctccaggtttt
aaaggagatcaaggacataaaggatcaaaaggtgagccaggatacgtgtatccagaaggg
ccaaaaggtgagcaaggagatccagggtccaggggagacaaaggaagaaaaggttcaagt
ggatttccgggaagatctggaccaaagggctacaagggttctaaaggtgaagagggattg
cctggtacaaaaggagatagaggactacctggactgcctggtaatcctggtctccctgga
gagatggggcttcctggaccaccaggatatggaccacaaggaataagaggtttcaaaggt
tctaaaggagtaattggtcctcctggattgcctggagaagctggtctgaaaggagagacc
agtaggataactccattgcctggattgccaggacctcaaggaccagatggtttacctgga
cccccaggggtgcctggaagggtcggaacaaatggtcagccaggtgatccaggacatcca
ggcccaacaggtgacacaggctttccagggcttgggtttcctggaaacccaggtccaaaa
ggagataagggacttactggaggcagaggatcaccaggttgtgaaggaaaaattggagag
ccaggacgagctggaaatctgggacaaccaggagaaaagggggacccaggcatgattatt
catggagagccaggcagacttggttcaccaggaggtcgtggcattcctggcccaaaaggt
gatacaggatttccaggacttccaggcctaccaggacgtgctggacatgatggtgatgat
ggcctaagaggagatcctggctcacctggaattccaggggatccaggttttccagggaaa
cctgctgagtgtcttactggccggccaggtttgccaggtggccagggagctacaggccca
ccaggaggaagaggttcattaggttcaaaaggaaaacttggtcctcctggcttgggtatc
ccaggaatctatggaaaaccgggggaacctggcttaattggtcttcagggaaacgcagga
ttacctggtttcaagggacagtctggaagaccaggaatcgatggtgtgccaggccctagg
ggagagccaggtctaatgggcccgttaggaattcctggacccccaggcatgattggaagt
ccaggcaacccaggtgtcaggggttcttttggcttcccagggctaaaaggaagaaagggg
tttcttggagcaaaaggtgaacaaggtgataaaggttttcctggaccttctgaaaccttg
gttggcattggaaataaaggagagcaaggcccaaaaggagtccaaggaagcatgggtcta
agaggagaaaaaggagatgcaggtgtacaaggtcccccaggtcttgctggatctgaagga
gtacctggtataccaggtgccaaaggatttatgggtcttccaggtattcctggaggacaa
ggattcccaggtgcaccaggagacaaagggaacatgggaattccaggttcaaaaggacag
aaaggatctccaggctttccaggaccatcaggtgaccctggtccaacaggctatggtggc
tttccaggtgaaaaaggagaccctgggcacccatctcctgggcccccaggagaacctggt
ccaaagggagattcaggtgctcctggacttctgggcagcaaaggagaaaaagggtcccaa
ggtcagccaggacatagaggagtaccagggccacatggggtcagaggggaaacaggagtt
gcaggaatcccagggaaacctggacctcctggagatgttggtgttaaaggacagcagggt
cgcccaggacaacagggcattataggccctcctggtgctgttggataccctggagaaaat
ggacttgctggtgaaagaggcaatcagggtcgggatggtatgcctggtcccccaggagta
aagggagaaccaggggcaccagggagaggtatccctggccttcgaggtgttcctggtcgt
agaggaatcaaaggggacatggggctgcctggttttcctgggccaccaggtgtgaaaggt
catcagggtgatcaaggacccattggacctcctggcttaatgggattacctggatttcaa
ggtgcaacaggcatggcaattactggcccaaaaggaaatagaggccttgctggtgcagat
ggaaggccaggtgctcctggctttcaagggttgcctggtcttcccactcccagcatgaaa
ggaaacaaaggtgttagaggggcagatggcataccagggccaacaggtccaaacggcgac
actggtcctccaggtccaaaaggaatagaaggtcgaccaggttatcctggtgctagaggg
gaccctggttttcttggatttccaggtgtaaaaggagaaaagggtaatcaaggaccccct
ggaccacaaggtgcagaagggccaaggggaccaaaaggccaacgtggtccacctggagtc
tctgggagaatattctctgtcccaggaagcaaggggcctcctggactgccaggagtccca
ggaacaccaggagatcaaggaattcaagggattcctgggctacaaggacctaaaggagta
aaaggtctaccaggaagctttggtcgtccaggtcaaccaggactgcctggtccaaaagga
gaccggggatttccaggagaaagaggacaacctggactgattggttttcctggtctacag
gggttacctggatcaccaggtactatcatcactggtccaacaagaagaggttttatcttt
acccggcatagtcaaacaacaaagactccttcgtgtccaccagggacatcacagatctat
gttggcttttcgctgctttttgttcaaggaaacgaacgagcgcatggacaagaccttgga
acagctggtagctgcttgcagagatttaccaccatgccattcttattctgtaacaccaat
gatgtttgtagctttgcttctcgcaacgactattcatactggctgtcagctgtgacagca
atgccagtagacatggcaccgatttctggcagagcactagagccccatataagcagatgc
attgtctgtgaaggacctgcaatggtaatagcagttcacagccaaacaactgtagttcct
gcatgtccagaaggctggatatctctctggaagggtttttcttttgttatgtatacgagt
gctggctcagaagcttctggccaagcgctggcatctcctggatcttgcttggaagaattt
cgagccatcccattcatagagtgtcatggcaggggcacgtgcaactactatacgaactcc
tacagcttctggttggcatcactaaatccacgaagaatgttcaggaaacctctgccacag
acgttgaaagcaggagaactagaaaacatcatcagtcgttgtcaggtctgcatgaagaga
ccagtgtaa
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