KEGG   Aythya fuligula (tufted duck): 116492458
Entry
116492458         CDS       T07966                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful04510  Focal adhesion
aful04512  ECM-receptor interaction
aful04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aful00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116492458 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116492458 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116492458 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aful04147]
    116492458 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:aful00536]
    116492458 (COL4A3)
Exosome [BR:aful04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   116492458 (COL4A3)
Glycosaminoglycan binding proteins [BR:aful00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116492458 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 116492458
NCBI-ProteinID: XP_032049116
UniProt: A0A6J3DCB4
LinkDB
Position
9:complement(3562610..3623026)
AA seq 1682 aa
MAAGGCPGRPLPPLPLLLLLLLLPVLLALLRPGRAAAAESCVCKGKSPCFCDGTKGNKGE
KGFPGVPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGAPGIPGFSGPPGLPGE
PGAAGPPGRSGVPGCNGTKGDQGFPGPPGRRGAPGIPGVTGIKGEKGSPADGYNQRYDAK
GDPGLPGMPGLQGAQGVQGYPGENGPQGPPGTSGMPGRPGPPGPKGLMGIKVIGTKGRKG
DTGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPVGDSQSEKGDRG
EPGAQGKPGKEGAPGPPGLPGQKGEQGKPGMAGRQGAKGIKGNTGPPGACGRTEYYDNVV
GDKGDEGPPGPPGPKGQRGMPGPQGPPGGAGRPGVSRPGLRGPPGFPGPKGKKGEKGQTG
LCIVGPPGLPGITGRPGSVGLPGPPGEPGRVIFRTGPPGHPGEPGYAGPPGPPGDVGMKG
EEAGVCTDCSYVPGTPGLPGSPGPHGQDGIPGREGTQGPKGAPGSPGAPGFPGAQGPPGF
KGDQGHKGSKGEPGYVYPEGPKGEQGDPGSRGDKGRKGSSGFPGRSGPKGYKGSKGEEGL
PGTKGDRGLPGLPGNPGLPGEMGLPGPPGYGPQGIRGFKGSKGVIGPPGLPGEAGLKGET
SRITPLPGLPGPQGPDGLPGPPGVPGRVGTNGQPGDPGHPGPTGDTGFPGLGFPGNPGPK
GDKGLTGGRGSPGCEGKIGEPGRAGNLGQPGEKGDPGMIIHGEPGRLGSPGGRGIPGPKG
DTGFPGLPGLPGRAGHDGDDGLRGDPGSPGIPGDPGFPGKPAECLTGRPGLPGGQGATGP
PGGRGSLGSKGKLGPPGLGIPGIYGKPGEPGLIGLQGNAGLPGFKGQSGRPGIDGVPGPR
GEPGLMGPLGIPGPPGMIGSPGNPGVRGSFGFPGLKGRKGFLGAKGEQGDKGFPGPSETL
VGIGNKGEQGPKGVQGSMGLRGEKGDAGVQGPPGLAGSEGVPGIPGAKGFMGLPGIPGGQ
GFPGAPGDKGNMGIPGSKGQKGSPGFPGPSGDPGPTGYGGFPGEKGDPGHPSPGPPGEPG
PKGDSGAPGLLGSKGEKGSQGQPGHRGVPGPHGVRGETGVAGIPGKPGPPGDVGVKGQQG
RPGQQGIIGPPGAVGYPGENGLAGERGNQGRDGMPGPPGVKGEPGAPGRGIPGLRGVPGR
RGIKGDMGLPGFPGPPGVKGHQGDQGPIGPPGLMGLPGFQGATGMAITGPKGNRGLAGAD
GRPGAPGFQGLPGLPTPSMKGNKGVRGADGIPGPTGPNGDTGPPGPKGIEGRPGYPGARG
DPGFLGFPGVKGEKGNQGPPGPQGAEGPRGPKGQRGPPGVSGRIFSVPGSKGPPGLPGVP
GTPGDQGIQGIPGLQGPKGVKGLPGSFGRPGQPGLPGPKGDRGFPGERGQPGLIGFPGLQ
GLPGSPGTIITGPTRRGFIFTRHSQTTKTPSCPPGTSQIYVGFSLLFVQGNERAHGQDLG
TAGSCLQRFTTMPFLFCNTNDVCSFASRNDYSYWLSAVTAMPVDMAPISGRALEPHISRC
IVCEGPAMVIAVHSQTTVVPACPEGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEF
RAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRKPLPQTLKAGELENIISRCQVCMKR
PV
NT seq 5049 nt   +upstreamnt  +downstreamnt
atggccgccgggggctgtcccggccgcccgctgccgcctctgcccctgctgctgctgctg
ctgctgctgccggtgctgctcgccctgctccggccgggccgcgccgcggcggctgagagc
tgtgtatgcaaaggtaaaagtccttgcttctgtgatggcacgaaaggtaataagggtgaa
aaaggcttccctggtgtcccaggtccacctggtcatagaggctttcccggtccagaaggg
cctccagggccacaggggccaaagggttcaccaggacttacgggcttagttggacccaaa
ggtatacggggagctccaggaatacctggattttcaggtcccccaggtcttccaggtgaa
ccaggagctgctggccctcctggacgctcgggtgttccaggatgcaatggcacaaagggc
gatcaaggttttccaggtcctccaggtagaagaggtgctccaggcattccaggtgtcact
ggcatcaaaggagagaaggggtcccctgcagatggatataaccaaagatacgatgcaaaa
ggtgatcctgggttgccaggaatgcctgggcttcagggtgcacagggtgttcaaggatat
cctggggaaaatgggccacagggccctccaggaacttcaggaatgccagggagaccagga
cctcctggacctaagggtcttatgggaataaaagtaataggaaccaaaggaagaaagggt
gacactggattaactggacctcctggaccaccaggaactgttattgtgacattaagtggt
ccagacaacatgacggacttgaaaggagagaaaggggaaaaaggatcaagaggacttcca
ggaccaatggggtttacagggccagttggtgattctcaaagtgaaaagggtgaccgagga
gaacccggagcacagggtaaacctggaaaagaaggtgccccaggtccacctggcttaccg
ggacaaaagggcgaacagggcaaaccaggaatggctggcagacaaggagccaaggggata
aaaggcaacactggtccgcctggagcttgtggtcgaacagagtattatgataatgtagtt
ggtgataagggagatgaaggaccccctggacctccaggaccaaaaggtcaacgtggtatg
cctgggccacagggtcctcctggaggtgctggtagaccaggtgtgtcaagacctggtctg
agaggtcccccgggatttcctggcccaaaaggaaaaaaaggagaaaaaggacaaacaggc
ttgtgcattgtaggccctccaggactacctgggattactggcagacctggttctgttgga
ttaccaggtcctccaggagaaccaggtagagtaatatttagaacaggcccaccaggacat
cctggagagccagggtatgcaggacctccaggacctccaggagatgttggcatgaaaggt
gaagaagctggcgtgtgtactgattgtagctatgttccaggaacacctggtcttcctggt
tcgcctgggccacacggccaggatggcatccctggtagggaaggaacacaaggtcccaaa
ggagctccaggttctccaggagcaccagggtttccaggagctcaaggacctccaggtttt
aaaggagatcaaggacataaaggatcaaaaggtgagccaggatacgtgtatccagaaggg
ccaaaaggtgagcaaggagatccagggtccaggggagacaaaggaagaaaaggttcaagt
ggatttccgggaagatctggaccaaagggctacaagggttctaaaggtgaagagggattg
cctggtacaaaaggagatagaggactacctggactgcctggtaatcctggtctccctgga
gagatggggcttcctggaccaccaggatatggaccacaaggaataagaggtttcaaaggt
tctaaaggagtaattggtcctcctggattgcctggagaagctggtctgaaaggagagacc
agtaggataactccattgcctggattgccaggacctcaaggaccagatggtttacctgga
cccccaggggtgcctggaagggtcggaacaaatggtcagccaggtgatccaggacatcca
ggcccaacaggtgacacaggctttccagggcttgggtttcctggaaacccaggtccaaaa
ggagataagggacttactggaggcagaggatcaccaggttgtgaaggaaaaattggagag
ccaggacgagctggaaatctgggacaaccaggagaaaagggggacccaggcatgattatt
catggagagccaggcagacttggttcaccaggaggtcgtggcattcctggcccaaaaggt
gatacaggatttccaggacttccaggcctaccaggacgtgctggacatgatggtgatgat
ggcctaagaggagatcctggctcacctggaattccaggggatccaggttttccagggaaa
cctgctgagtgtcttactggccggccaggtttgccaggtggccagggagctacaggccca
ccaggaggaagaggttcattaggttcaaaaggaaaacttggtcctcctggcttgggtatc
ccaggaatctatggaaaaccgggggaacctggcttaattggtcttcagggaaacgcagga
ttacctggtttcaagggacagtctggaagaccaggaatcgatggtgtgccaggccctagg
ggagagccaggtctaatgggcccgttaggaattcctggacccccaggcatgattggaagt
ccaggcaacccaggtgtcaggggttcttttggcttcccagggctaaaaggaagaaagggg
tttcttggagcaaaaggtgaacaaggtgataaaggttttcctggaccttctgaaaccttg
gttggcattggaaataaaggagagcaaggcccaaaaggagtccaaggaagcatgggtcta
agaggagaaaaaggagatgcaggtgtacaaggtcccccaggtcttgctggatctgaagga
gtacctggtataccaggtgccaaaggatttatgggtcttccaggtattcctggaggacaa
ggattcccaggtgcaccaggagacaaagggaacatgggaattccaggttcaaaaggacag
aaaggatctccaggctttccaggaccatcaggtgaccctggtccaacaggctatggtggc
tttccaggtgaaaaaggagaccctgggcacccatctcctgggcccccaggagaacctggt
ccaaagggagattcaggtgctcctggacttctgggcagcaaaggagaaaaagggtcccaa
ggtcagccaggacatagaggagtaccagggccacatggggtcagaggggaaacaggagtt
gcaggaatcccagggaaacctggacctcctggagatgttggtgttaaaggacagcagggt
cgcccaggacaacagggcattataggccctcctggtgctgttggataccctggagaaaat
ggacttgctggtgaaagaggcaatcagggtcgggatggtatgcctggtcccccaggagta
aagggagaaccaggggcaccagggagaggtatccctggccttcgaggtgttcctggtcgt
agaggaatcaaaggggacatggggctgcctggttttcctgggccaccaggtgtgaaaggt
catcagggtgatcaaggacccattggacctcctggcttaatgggattacctggatttcaa
ggtgcaacaggcatggcaattactggcccaaaaggaaatagaggccttgctggtgcagat
ggaaggccaggtgctcctggctttcaagggttgcctggtcttcccactcccagcatgaaa
ggaaacaaaggtgttagaggggcagatggcataccagggccaacaggtccaaacggcgac
actggtcctccaggtccaaaaggaatagaaggtcgaccaggttatcctggtgctagaggg
gaccctggttttcttggatttccaggtgtaaaaggagaaaagggtaatcaaggaccccct
ggaccacaaggtgcagaagggccaaggggaccaaaaggccaacgtggtccacctggagtc
tctgggagaatattctctgtcccaggaagcaaggggcctcctggactgccaggagtccca
ggaacaccaggagatcaaggaattcaagggattcctgggctacaaggacctaaaggagta
aaaggtctaccaggaagctttggtcgtccaggtcaaccaggactgcctggtccaaaagga
gaccggggatttccaggagaaagaggacaacctggactgattggttttcctggtctacag
gggttacctggatcaccaggtactatcatcactggtccaacaagaagaggttttatcttt
acccggcatagtcaaacaacaaagactccttcgtgtccaccagggacatcacagatctat
gttggcttttcgctgctttttgttcaaggaaacgaacgagcgcatggacaagaccttgga
acagctggtagctgcttgcagagatttaccaccatgccattcttattctgtaacaccaat
gatgtttgtagctttgcttctcgcaacgactattcatactggctgtcagctgtgacagca
atgccagtagacatggcaccgatttctggcagagcactagagccccatataagcagatgc
attgtctgtgaaggacctgcaatggtaatagcagttcacagccaaacaactgtagttcct
gcatgtccagaaggctggatatctctctggaagggtttttcttttgttatgtatacgagt
gctggctcagaagcttctggccaagcgctggcatctcctggatcttgcttggaagaattt
cgagccatcccattcatagagtgtcatggcaggggcacgtgcaactactatacgaactcc
tacagcttctggttggcatcactaaatccacgaagaatgttcaggaaacctctgccacag
acgttgaaagcaggagaactagaaaacatcatcagtcgttgtcaggtctgcatgaagaga
ccagtgtaa

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