Aythya fuligula (tufted duck): 116492746
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Entry
116492746 CDS
T07966
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116492746 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116492746 (CNOT2)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116492746 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116492746 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
116492746
NCBI-ProteinID:
XP_032049594
UniProt:
A0A6J3DJS9
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All DBs
Position
1:38152012..38237669
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AA seq
520 aa
AA seq
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MFGASRKKFVEGVDGDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYGQQS
ALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMM
NHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQ
AFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVG
MVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSNDDNKSNLNTSGKTSSSTDGPKFPGD
KSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYG
EDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYY
FFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaaggaagaagtttgtagagggggttgatggtgactaccatgatgaa
aacatgtactacagccaatcatcgatgttcccacatcggtcagaaaaagatatgctggca
tcaccatcaacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagt
gcactaggccttccaatgaggggaatgagcaacaatacccctcagttaaatcgcagctta
tcacaaggcactcagttaccgagccacgtaacgccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccgagcagggggatattgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcccagcaggacaaacagcatgagcagt
tcagggttaggcagccccaacagaagctctccaagcataatatgtatgccaaagcagcaa
ccctctcgacaaccttttactgtgaacagtatgtctggatttgggatgaacagaaatcag
gcgttcggaatgaataactccttatcaagtaacatttttaatggaacagatggaagtgaa
aatgtgacaggactggacctctcagattttccagcgctagcagacagaaacagaagggaa
ggaagtggcaatccaactccattaataaaccctttagctggaagggctccctatgttgga
atggtaacaaaaccagcaagtgagcagtcccaggacttttcaatacacaatgaagatttt
ccagcattaccaggctccagctacaaagacccaacatcaagtaacgatgacaataaatct
aatttgaatacatcaggcaaaacatcatccagcacagatgggcccaagtttcctggagat
aaaagttcaactacgcaaaacaacaaccagcagaaaaaagggatccaggtgttacctgac
ggtcgggttaccaacattcctcaagggatggtgacggaccagtttggaatgattggcttg
ttaacattcatcagggcagcagagacagatccaggaatggtacatcttgcattaggaagt
gatttaacaacactaggtctcaatctcaactctcctgaaaatctttatcccaaatttgca
tcaccctgggcatcatcaccttgtcgacctcaagacatagacttccatgttccatctgaa
tacttaactaacattcacattagggataagctggctgcaataaaacttggccgatatgga
gaagatctcctgttttatctctattacatgaatggaggagatgtattacagctattagca
gcagtagagctatttaaccgagattggagataccacaaagaagaacgagtatggatcacc
agggcacccggcatggagccaacaatgaaaaccaatacatacgagaggggaacatattac
ttctttgactgtcttaactggaggaaagtagctaaggagttccatctggaatatgacaaa
ttagaagaaaggcctcatctgccatcaaccttcaactacaaccctgctcagcaagccttc
taa
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