KEGG   Aythya fuligula (tufted duck): 116492768
Entry
116492768         CDS       T07966                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful04510  Focal adhesion
aful04512  ECM-receptor interaction
aful04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aful00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116492768
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116492768
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116492768
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aful04147]
    116492768
   00536 Glycosaminoglycan binding proteins [BR:aful00536]
    116492768
Exosome [BR:aful04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   116492768
Glycosaminoglycan binding proteins [BR:aful00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116492768
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 116492768
NCBI-ProteinID: XP_032049632
UniProt: A0A6J3DJD6
LinkDB
Position
9:3623217..3691747
AA seq 1681 aa
MALPKDSFERIKWLIRAAWWLLIVFSAQEIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSAGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKRGVDGCNGSRGDPGFPGENGYIGPRGPSGNPGQKGEKGNSVFVSHFGKGPP
GERGDPGPPGIPGPRGSRGTTGPRGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGITGYRGPRGPKGIPGRGEKGEKGIAGF
PGLRGSPGSYGPAGFPGIKGETGTAGFPGQPGYPGIKGDPGEKGPPGPPGAVGTPLLPMK
GPQGDPGFPGPAGDVGSVGPSGPAGALGRPGDDGASLPGLPGLSGAPGPQGFHGDPGLPG
TGEPLPGRPGYPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGAKGQIGLPGRKGEKGE
KGNQGLCSCSAGPPGPRGIQGPPGTQGKKGQMGYPGRHGEKGDPGLSGAMGSPGLPGTPG
SAGQHGEKGEKGDLGRVRIKGIKGERGPTGVPGFPGQRGNDGRDGDLGLPGEKGAEGDSG
IPVPGDKGIPGVPGLPGVKGPIGLPGLGIPGPPGVRGSPGDFGDTGSVGPPGLKGQKGET
VCIVSPSPGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGQQGRPGAGIPGPEGFRGK
AGDPGEEGERGSTINGKNGAPGPPGPDGQKGVPGDTTYGPPGIPGNRGLPGPPGAQGARG
DPGIPGLQGQPGTPGFPGAKGFRGPEGNIGAPGCPGFPGPLCDMGLPGPPGLRGVIGLPG
PQGLPGFKGQKGDRGLAGPPGIKGLKGSPGSRGPPGPPGSRGLPGLPGNNGPPGFPGQTG
SKGIQGPQGFLGLPGTQGPMGISGVKGEEGKMGPSGPSGECGDIGMKGERGRPGDSGSIN
IRLEKGQKGEPGFPGENGFRGERGEKGNIGFRGAPGFPGKNGVPGLPGDHGDTGLMGFPG
LRGFPGPKGFKGMTGFQGQPGDQGDVGLPGMPGNPGLTGPKGSKGKRGDPTLLLGIRGQK
GPPGDPGLTGFCGLPGEKGSAGIQGQPGRLGSKGESGYPGIPGFPGAPGPPGLPGEPGEK
GKQGLSGPPGLQGLAGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGRPGYSGELG
PKGDRGKPGWPGISIPGAPGERGFPGFPGIRGPVGPAGPMGRSPSSAPPGLPGDQGPPGL
DGIRGQPGNPGPPGETIFVQGDPGDTGIQGAPGISGQRGQQGARGPPGNQGREGPKGPMG
IHGPQGPPGAVGHPGDQGFQGKPGPKGPTGFIGDPGEPGRRDDSCPTIPGPPGEAGQRGD
DGSIGLSGPIGHPGPQGRKGEEGSCGLPGQDGLPGAPGPPGDQGHVGEQGYTGPQGPPGQ
TGIPGPPGPHVRSSSGFLLVLHSQSDREPPCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPVFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMTPLSEEEIEPYISRCAVC
EAPAQAVAVHSQDQSIPPCPMNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKKISRCQVCLKH
G
NT seq 5046 nt   +upstreamnt  +downstreamnt
atggcattaccaaaggattcgtttgaacggattaagtggcttatcagagctgcctggtgg
ctgctgattgttttttcagcacaagaaattgatgggggaggatacgcatatattgaccca
tgtgggggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
cctggtgagctgggagctcaaggtccaattggatccttgggatctgcaggaccagccggt
ctgccaggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggtctagatggtgttcctggatta
ccaggaagtgaaggacccaggggcaaacgtggtgtagatggctgcaatggctcaagaggc
gatccaggatttccaggcgaaaatggatacattggacctagaggtcctagtggaaatcca
gggcaaaaaggagaaaaaggaaattcagtgtttgtatcacattttggaaaaggaccccca
ggagagaggggtgatcctggaccccctggcattcctggtcctagagggtcaagaggtaca
acaggcccacgtggatacccaggccaaccaggcttacctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtagatggacaaaagggggagccgggc
gatgttggacttcctggaccacctgggtcaccattgttagttggacctcctggagctcag
ctgtttaaaggagaaaagggccaaaaaggactacccggaataacaggataccgaggaccg
cgtggacccaaaggtatacctgggagaggagaaaagggtgaaaaaggcattgctggattc
cccggattgcggggtagtcctggttcttacggacctgcaggctttcctggaataaaggga
gaaacaggaactgctggttttcctgggcaacctggctatccaggcataaagggggatcct
ggagaaaaagggcccccaggtcctcctggagctgttggaactccattgcttcccatgaaa
ggtccacaaggagatcctggatttccaggtcctgctggtgatgtggggtcagttgggcca
tctggtcctgcaggtgcactggggagaccaggagatgatggagcaagtctgcctggcctg
ccaggactaagtggggcaccaggacctcaaggttttcatggtgatcctggtttgccagga
acaggtgaaccacttccaggaagacctggatatcctggaccaccaggactaccgggacag
ccaggaaggcaagggttacctggactacctagtgtaatttgtactgacagagggatccct
ggggaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgaaaaaggagaa
aaaggaaaccaaggcctctgctcatgtagtgctggtcctcctggtccccgtggtatacaa
ggacctccgggtactcaaggaaagaaaggacaaatgggttaccctggaagacatggagaa
aagggtgatccaggcttatctggtgcaatgggatcaccagggctccctgggacacctggt
tcggctggacaacatggtgaaaaaggagaaaagggtgacctaggaagagttagaataaaa
ggaataaaaggtgaaagaggtcctactggcgttccaggatttccaggccaaagaggtaat
gatggcagagatggggatttaggattgcctggggagaaaggagctgagggtgattctgga
ataccagtgccaggtgataaaggaatccctggagtcccaggactccctggagtaaaagga
ccaataggattgccaggtttggggattcctggccctcctggagtcagaggtagccctgga
gactttggtgatactggtagcgttgggccgcctggtctaaagggtcagaaaggtgagact
gtctgtattgtatcaccatcccctggaaacccaggtcccccaggttttaaaggtgttcaa
ggaccaaagggtttaaaaggactgcctggtcgtcctggaccaaatggctttgatgggcaa
aaaggccagcaaggcagaccaggagctggaatccctgggccagaaggcttccgaggcaaa
gctggtgatcctggtgaggaaggtgaaagaggatccaccattaatggtaaaaatggtgct
ccaggtccacctggcccagatggtcagaaaggtgttccaggtgatactacatatggtcct
ccaggaatcccaggcaataggggactgccaggaccacctggtgcacaaggagcaaggggt
gatccaggcattcctgggcttcaagggcagcctggtactccaggatttccaggtgctaaa
ggttttagaggcccagaaggcaatataggagcaccaggctgtccaggcttccctggtcca
ctgtgtgacatgggattaccagggccaccaggactcagaggtgtcataggcctgccaggc
cctcaaggcttaccaggctttaagggtcagaagggagataggggcctagctgggccacct
ggaatcaaaggtctcaagggctctcctggctcacggggccccccaggtcctccaggctcc
cgaggacttccaggacttccaggtaataacggaccacctggcttcccaggacaaacagga
agcaaagggatccaaggaccccaaggattcctaggactcccaggaacacaaggcccaatg
ggaatctctggtgttaaaggtgaagaaggaaaaatgggtccatctgggcctagtggagaa
tgtggggatattggaatgaaaggtgaaagaggacgtccaggagacagtggctccattaac
attcggcttgagaaaggacaaaagggagagccaggctttcctggtgagaatggatttaga
ggtgaaagaggtgaaaaaggcaatataggtttcagaggtgccccaggatttccagggaag
aatggtgtcccaggactgccaggtgaccatggtgacactggactgatggggtttccagga
ttacggggtttcccaggaccaaagggcttcaaaggaatgacaggattccaaggacaacca
ggtgaccagggtgatgtcggcttaccaggaatgcctggaaacccaggattgactggccca
aaaggatctaaaggcaagagaggtgacccaactcttctgcttggtatacgtggtcaaaaa
gggcctcctggagacccaggattaacaggattctgtgggttacctggagagaagggttca
gcaggtatccaaggacaacctggaagactaggatccaagggcgagtctggatacccagga
atacctggatttccaggagctccaggtcctccaggattgccaggagaacctggagaaaaa
gggaaacaaggactttcgggacctccaggattgcaaggattagctggatcgcagggcagg
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcaaaaaggt
tctgcaggagctccaggtcaaagtgaaacagggcgcccaggatactcaggagaacttgga
ccgaaaggtgacagaggtaaacctggatggcccggtatttccattccaggcgcccctgga
gaaaggggatttccaggattcccaggtataagagggcctgttggacctgctggacctatg
ggaagatctcccagtagtgcccctcccggacttccaggtgatcaaggaccacctggttta
gatggcatcagaggtcagcctgggaatcctggtcctcctggagaaaccatctttgtgcaa
ggagatccaggcgacactggtattcaaggggcaccaggcatttctgggcagcgagggcaa
caaggagccagaggtcctccagggaaccaaggaagagaaggcccaaagggtcctatggga
atccatggcccacagggtccacctggtgctgtaggacacccaggagaccaaggttttcaa
gggaaacctggtcctaaaggtcccacaggtttcattggtgaccctggtgaaccaggaaga
agagatgactcatgccctacaattccaggacctcccggggaagcgggacaaagaggagat
gatggctctataggattatcagggccaataggtcatcctggaccccaaggaagaaaaggt
gaagaagggtcctgtggactgccaggtcaagatggtttacctggggcacctggaccacca
ggtgaccaagggcatgtaggagagcaaggatacactggaccacaaggtccacctggccag
actggtatcccaggaccaccaggccctcatgtgagatcttcaagtggattcttgcttgtc
cttcacagtcagtcagacagagaaccaccctgtccacagggaatgccaaagttatggaca
ggctatagcctgctgtacctggaaggacaagaaaaagctcacaatcaagatcttggtcta
gcaggatcttgtcttcctgtatttaatactatgcccttcgcctactgtaatatcaaccaa
gtttgttactatgccagccgaaatgataagtcttactggttgtcaagtgctgctccttta
ccaatgacgccactctctgaagaagaaatagaaccctacataagcaggtgtgctgtatgt
gaggccccagcccaagcagtagcagttcacagccaagatcagtcaattcctccctgcccc
atgaactggagaagtctttggataggatattcttttttgatgcacactggatctggtgat
cagggtggtggacagtcccttatgtcacctggaagttgcttggaagacttcagatcagca
ccattcattgaatgccagggtcagcggggaacttgtcagttttttgctaatgagtacagt
ttttggctaacaacagtgatgcctgaactgcagtttgcatcagcccccttgtcaggaact
cttaaagagggacaagagcagaggaaaaaaatcagtagatgtcaagtctgcctgaagcat
ggttaa

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