Aythya fuligula (tufted duck): 116492768
Help
Entry
116492768 CDS
T07966
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116492768
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116492768
09142 Cell motility
04820 Cytoskeleton in muscle cells
116492768
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116492768
00536 Glycosaminoglycan binding proteins [BR:
aful00536
]
116492768
Exosome [BR:
aful04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116492768
Glycosaminoglycan binding proteins [BR:
aful00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116492768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116492768
NCBI-ProteinID:
XP_032049632
UniProt:
A0A6J3DJD6
LinkDB
All DBs
Position
9:3623217..3691747
Genome browser
AA seq
1681 aa
AA seq
DB search
MALPKDSFERIKWLIRAAWWLLIVFSAQEIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSAGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKRGVDGCNGSRGDPGFPGENGYIGPRGPSGNPGQKGEKGNSVFVSHFGKGPP
GERGDPGPPGIPGPRGSRGTTGPRGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGITGYRGPRGPKGIPGRGEKGEKGIAGF
PGLRGSPGSYGPAGFPGIKGETGTAGFPGQPGYPGIKGDPGEKGPPGPPGAVGTPLLPMK
GPQGDPGFPGPAGDVGSVGPSGPAGALGRPGDDGASLPGLPGLSGAPGPQGFHGDPGLPG
TGEPLPGRPGYPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGAKGQIGLPGRKGEKGE
KGNQGLCSCSAGPPGPRGIQGPPGTQGKKGQMGYPGRHGEKGDPGLSGAMGSPGLPGTPG
SAGQHGEKGEKGDLGRVRIKGIKGERGPTGVPGFPGQRGNDGRDGDLGLPGEKGAEGDSG
IPVPGDKGIPGVPGLPGVKGPIGLPGLGIPGPPGVRGSPGDFGDTGSVGPPGLKGQKGET
VCIVSPSPGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGQQGRPGAGIPGPEGFRGK
AGDPGEEGERGSTINGKNGAPGPPGPDGQKGVPGDTTYGPPGIPGNRGLPGPPGAQGARG
DPGIPGLQGQPGTPGFPGAKGFRGPEGNIGAPGCPGFPGPLCDMGLPGPPGLRGVIGLPG
PQGLPGFKGQKGDRGLAGPPGIKGLKGSPGSRGPPGPPGSRGLPGLPGNNGPPGFPGQTG
SKGIQGPQGFLGLPGTQGPMGISGVKGEEGKMGPSGPSGECGDIGMKGERGRPGDSGSIN
IRLEKGQKGEPGFPGENGFRGERGEKGNIGFRGAPGFPGKNGVPGLPGDHGDTGLMGFPG
LRGFPGPKGFKGMTGFQGQPGDQGDVGLPGMPGNPGLTGPKGSKGKRGDPTLLLGIRGQK
GPPGDPGLTGFCGLPGEKGSAGIQGQPGRLGSKGESGYPGIPGFPGAPGPPGLPGEPGEK
GKQGLSGPPGLQGLAGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGRPGYSGELG
PKGDRGKPGWPGISIPGAPGERGFPGFPGIRGPVGPAGPMGRSPSSAPPGLPGDQGPPGL
DGIRGQPGNPGPPGETIFVQGDPGDTGIQGAPGISGQRGQQGARGPPGNQGREGPKGPMG
IHGPQGPPGAVGHPGDQGFQGKPGPKGPTGFIGDPGEPGRRDDSCPTIPGPPGEAGQRGD
DGSIGLSGPIGHPGPQGRKGEEGSCGLPGQDGLPGAPGPPGDQGHVGEQGYTGPQGPPGQ
TGIPGPPGPHVRSSSGFLLVLHSQSDREPPCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPVFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMTPLSEEEIEPYISRCAVC
EAPAQAVAVHSQDQSIPPCPMNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKKISRCQVCLKH
G
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcattaccaaaggattcgtttgaacggattaagtggcttatcagagctgcctggtgg
ctgctgattgttttttcagcacaagaaattgatgggggaggatacgcatatattgaccca
tgtgggggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
cctggtgagctgggagctcaaggtccaattggatccttgggatctgcaggaccagccggt
ctgccaggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggtctagatggtgttcctggatta
ccaggaagtgaaggacccaggggcaaacgtggtgtagatggctgcaatggctcaagaggc
gatccaggatttccaggcgaaaatggatacattggacctagaggtcctagtggaaatcca
gggcaaaaaggagaaaaaggaaattcagtgtttgtatcacattttggaaaaggaccccca
ggagagaggggtgatcctggaccccctggcattcctggtcctagagggtcaagaggtaca
acaggcccacgtggatacccaggccaaccaggcttacctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtagatggacaaaagggggagccgggc
gatgttggacttcctggaccacctgggtcaccattgttagttggacctcctggagctcag
ctgtttaaaggagaaaagggccaaaaaggactacccggaataacaggataccgaggaccg
cgtggacccaaaggtatacctgggagaggagaaaagggtgaaaaaggcattgctggattc
cccggattgcggggtagtcctggttcttacggacctgcaggctttcctggaataaaggga
gaaacaggaactgctggttttcctgggcaacctggctatccaggcataaagggggatcct
ggagaaaaagggcccccaggtcctcctggagctgttggaactccattgcttcccatgaaa
ggtccacaaggagatcctggatttccaggtcctgctggtgatgtggggtcagttgggcca
tctggtcctgcaggtgcactggggagaccaggagatgatggagcaagtctgcctggcctg
ccaggactaagtggggcaccaggacctcaaggttttcatggtgatcctggtttgccagga
acaggtgaaccacttccaggaagacctggatatcctggaccaccaggactaccgggacag
ccaggaaggcaagggttacctggactacctagtgtaatttgtactgacagagggatccct
ggggaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgaaaaaggagaa
aaaggaaaccaaggcctctgctcatgtagtgctggtcctcctggtccccgtggtatacaa
ggacctccgggtactcaaggaaagaaaggacaaatgggttaccctggaagacatggagaa
aagggtgatccaggcttatctggtgcaatgggatcaccagggctccctgggacacctggt
tcggctggacaacatggtgaaaaaggagaaaagggtgacctaggaagagttagaataaaa
ggaataaaaggtgaaagaggtcctactggcgttccaggatttccaggccaaagaggtaat
gatggcagagatggggatttaggattgcctggggagaaaggagctgagggtgattctgga
ataccagtgccaggtgataaaggaatccctggagtcccaggactccctggagtaaaagga
ccaataggattgccaggtttggggattcctggccctcctggagtcagaggtagccctgga
gactttggtgatactggtagcgttgggccgcctggtctaaagggtcagaaaggtgagact
gtctgtattgtatcaccatcccctggaaacccaggtcccccaggttttaaaggtgttcaa
ggaccaaagggtttaaaaggactgcctggtcgtcctggaccaaatggctttgatgggcaa
aaaggccagcaaggcagaccaggagctggaatccctgggccagaaggcttccgaggcaaa
gctggtgatcctggtgaggaaggtgaaagaggatccaccattaatggtaaaaatggtgct
ccaggtccacctggcccagatggtcagaaaggtgttccaggtgatactacatatggtcct
ccaggaatcccaggcaataggggactgccaggaccacctggtgcacaaggagcaaggggt
gatccaggcattcctgggcttcaagggcagcctggtactccaggatttccaggtgctaaa
ggttttagaggcccagaaggcaatataggagcaccaggctgtccaggcttccctggtcca
ctgtgtgacatgggattaccagggccaccaggactcagaggtgtcataggcctgccaggc
cctcaaggcttaccaggctttaagggtcagaagggagataggggcctagctgggccacct
ggaatcaaaggtctcaagggctctcctggctcacggggccccccaggtcctccaggctcc
cgaggacttccaggacttccaggtaataacggaccacctggcttcccaggacaaacagga
agcaaagggatccaaggaccccaaggattcctaggactcccaggaacacaaggcccaatg
ggaatctctggtgttaaaggtgaagaaggaaaaatgggtccatctgggcctagtggagaa
tgtggggatattggaatgaaaggtgaaagaggacgtccaggagacagtggctccattaac
attcggcttgagaaaggacaaaagggagagccaggctttcctggtgagaatggatttaga
ggtgaaagaggtgaaaaaggcaatataggtttcagaggtgccccaggatttccagggaag
aatggtgtcccaggactgccaggtgaccatggtgacactggactgatggggtttccagga
ttacggggtttcccaggaccaaagggcttcaaaggaatgacaggattccaaggacaacca
ggtgaccagggtgatgtcggcttaccaggaatgcctggaaacccaggattgactggccca
aaaggatctaaaggcaagagaggtgacccaactcttctgcttggtatacgtggtcaaaaa
gggcctcctggagacccaggattaacaggattctgtgggttacctggagagaagggttca
gcaggtatccaaggacaacctggaagactaggatccaagggcgagtctggatacccagga
atacctggatttccaggagctccaggtcctccaggattgccaggagaacctggagaaaaa
gggaaacaaggactttcgggacctccaggattgcaaggattagctggatcgcagggcagg
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcaaaaaggt
tctgcaggagctccaggtcaaagtgaaacagggcgcccaggatactcaggagaacttgga
ccgaaaggtgacagaggtaaacctggatggcccggtatttccattccaggcgcccctgga
gaaaggggatttccaggattcccaggtataagagggcctgttggacctgctggacctatg
ggaagatctcccagtagtgcccctcccggacttccaggtgatcaaggaccacctggttta
gatggcatcagaggtcagcctgggaatcctggtcctcctggagaaaccatctttgtgcaa
ggagatccaggcgacactggtattcaaggggcaccaggcatttctgggcagcgagggcaa
caaggagccagaggtcctccagggaaccaaggaagagaaggcccaaagggtcctatggga
atccatggcccacagggtccacctggtgctgtaggacacccaggagaccaaggttttcaa
gggaaacctggtcctaaaggtcccacaggtttcattggtgaccctggtgaaccaggaaga
agagatgactcatgccctacaattccaggacctcccggggaagcgggacaaagaggagat
gatggctctataggattatcagggccaataggtcatcctggaccccaaggaagaaaaggt
gaagaagggtcctgtggactgccaggtcaagatggtttacctggggcacctggaccacca
ggtgaccaagggcatgtaggagagcaaggatacactggaccacaaggtccacctggccag
actggtatcccaggaccaccaggccctcatgtgagatcttcaagtggattcttgcttgtc
cttcacagtcagtcagacagagaaccaccctgtccacagggaatgccaaagttatggaca
ggctatagcctgctgtacctggaaggacaagaaaaagctcacaatcaagatcttggtcta
gcaggatcttgtcttcctgtatttaatactatgcccttcgcctactgtaatatcaaccaa
gtttgttactatgccagccgaaatgataagtcttactggttgtcaagtgctgctccttta
ccaatgacgccactctctgaagaagaaatagaaccctacataagcaggtgtgctgtatgt
gaggccccagcccaagcagtagcagttcacagccaagatcagtcaattcctccctgcccc
atgaactggagaagtctttggataggatattcttttttgatgcacactggatctggtgat
cagggtggtggacagtcccttatgtcacctggaagttgcttggaagacttcagatcagca
ccattcattgaatgccagggtcagcggggaacttgtcagttttttgctaatgagtacagt
ttttggctaacaacagtgatgcctgaactgcagtttgcatcagcccccttgtcaggaact
cttaaagagggacaagagcagaggaaaaaaatcagtagatgtcaagtctgcctgaagcat
ggttaa
DBGET
integrated database retrieval system