KEGG   Aythya fuligula (tufted duck): 116492768
Entry
116492768         CDS       T07966                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful04382  Cornified envelope formation
aful04510  Focal adhesion
aful04512  ECM-receptor interaction
aful04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aful00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116492768
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116492768
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116492768
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116492768
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aful04147]
    116492768
   00536 Glycosaminoglycan binding proteins [BR:aful00536]
    116492768
Exosome [BR:aful04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   116492768
Glycosaminoglycan binding proteins [BR:aful00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116492768
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 116492768
NCBI-ProteinID: XP_032049632
UniProt: A0A6J3DJD6
LinkDB
Position
9:3623217..3691747
AA seq 1681 aa
MALPKDSFERIKWLIRAAWWLLIVFSAQEIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSAGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKRGVDGCNGSRGDPGFPGENGYIGPRGPSGNPGQKGEKGNSVFVSHFGKGPP
GERGDPGPPGIPGPRGSRGTTGPRGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGITGYRGPRGPKGIPGRGEKGEKGIAGF
PGLRGSPGSYGPAGFPGIKGETGTAGFPGQPGYPGIKGDPGEKGPPGPPGAVGTPLLPMK
GPQGDPGFPGPAGDVGSVGPSGPAGALGRPGDDGASLPGLPGLSGAPGPQGFHGDPGLPG
TGEPLPGRPGYPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGAKGQIGLPGRKGEKGE
KGNQGLCSCSAGPPGPRGIQGPPGTQGKKGQMGYPGRHGEKGDPGLSGAMGSPGLPGTPG
SAGQHGEKGEKGDLGRVRIKGIKGERGPTGVPGFPGQRGNDGRDGDLGLPGEKGAEGDSG
IPVPGDKGIPGVPGLPGVKGPIGLPGLGIPGPPGVRGSPGDFGDTGSVGPPGLKGQKGET
VCIVSPSPGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGQQGRPGAGIPGPEGFRGK
AGDPGEEGERGSTINGKNGAPGPPGPDGQKGVPGDTTYGPPGIPGNRGLPGPPGAQGARG
DPGIPGLQGQPGTPGFPGAKGFRGPEGNIGAPGCPGFPGPLCDMGLPGPPGLRGVIGLPG
PQGLPGFKGQKGDRGLAGPPGIKGLKGSPGSRGPPGPPGSRGLPGLPGNNGPPGFPGQTG
SKGIQGPQGFLGLPGTQGPMGISGVKGEEGKMGPSGPSGECGDIGMKGERGRPGDSGSIN
IRLEKGQKGEPGFPGENGFRGERGEKGNIGFRGAPGFPGKNGVPGLPGDHGDTGLMGFPG
LRGFPGPKGFKGMTGFQGQPGDQGDVGLPGMPGNPGLTGPKGSKGKRGDPTLLLGIRGQK
GPPGDPGLTGFCGLPGEKGSAGIQGQPGRLGSKGESGYPGIPGFPGAPGPPGLPGEPGEK
GKQGLSGPPGLQGLAGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGRPGYSGELG
PKGDRGKPGWPGISIPGAPGERGFPGFPGIRGPVGPAGPMGRSPSSAPPGLPGDQGPPGL
DGIRGQPGNPGPPGETIFVQGDPGDTGIQGAPGISGQRGQQGARGPPGNQGREGPKGPMG
IHGPQGPPGAVGHPGDQGFQGKPGPKGPTGFIGDPGEPGRRDDSCPTIPGPPGEAGQRGD
DGSIGLSGPIGHPGPQGRKGEEGSCGLPGQDGLPGAPGPPGDQGHVGEQGYTGPQGPPGQ
TGIPGPPGPHVRSSSGFLLVLHSQSDREPPCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPVFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMTPLSEEEIEPYISRCAVC
EAPAQAVAVHSQDQSIPPCPMNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKKISRCQVCLKH
G
NT seq 5046 nt   +upstreamnt  +downstreamnt
atggcattaccaaaggattcgtttgaacggattaagtggcttatcagagctgcctggtgg
ctgctgattgttttttcagcacaagaaattgatgggggaggatacgcatatattgaccca
tgtgggggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
cctggtgagctgggagctcaaggtccaattggatccttgggatctgcaggaccagccggt
ctgccaggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggtctagatggtgttcctggatta
ccaggaagtgaaggacccaggggcaaacgtggtgtagatggctgcaatggctcaagaggc
gatccaggatttccaggcgaaaatggatacattggacctagaggtcctagtggaaatcca
gggcaaaaaggagaaaaaggaaattcagtgtttgtatcacattttggaaaaggaccccca
ggagagaggggtgatcctggaccccctggcattcctggtcctagagggtcaagaggtaca
acaggcccacgtggatacccaggccaaccaggcttacctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtagatggacaaaagggggagccgggc
gatgttggacttcctggaccacctgggtcaccattgttagttggacctcctggagctcag
ctgtttaaaggagaaaagggccaaaaaggactacccggaataacaggataccgaggaccg
cgtggacccaaaggtatacctgggagaggagaaaagggtgaaaaaggcattgctggattc
cccggattgcggggtagtcctggttcttacggacctgcaggctttcctggaataaaggga
gaaacaggaactgctggttttcctgggcaacctggctatccaggcataaagggggatcct
ggagaaaaagggcccccaggtcctcctggagctgttggaactccattgcttcccatgaaa
ggtccacaaggagatcctggatttccaggtcctgctggtgatgtggggtcagttgggcca
tctggtcctgcaggtgcactggggagaccaggagatgatggagcaagtctgcctggcctg
ccaggactaagtggggcaccaggacctcaaggttttcatggtgatcctggtttgccagga
acaggtgaaccacttccaggaagacctggatatcctggaccaccaggactaccgggacag
ccaggaaggcaagggttacctggactacctagtgtaatttgtactgacagagggatccct
ggggaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgaaaaaggagaa
aaaggaaaccaaggcctctgctcatgtagtgctggtcctcctggtccccgtggtatacaa
ggacctccgggtactcaaggaaagaaaggacaaatgggttaccctggaagacatggagaa
aagggtgatccaggcttatctggtgcaatgggatcaccagggctccctgggacacctggt
tcggctggacaacatggtgaaaaaggagaaaagggtgacctaggaagagttagaataaaa
ggaataaaaggtgaaagaggtcctactggcgttccaggatttccaggccaaagaggtaat
gatggcagagatggggatttaggattgcctggggagaaaggagctgagggtgattctgga
ataccagtgccaggtgataaaggaatccctggagtcccaggactccctggagtaaaagga
ccaataggattgccaggtttggggattcctggccctcctggagtcagaggtagccctgga
gactttggtgatactggtagcgttgggccgcctggtctaaagggtcagaaaggtgagact
gtctgtattgtatcaccatcccctggaaacccaggtcccccaggttttaaaggtgttcaa
ggaccaaagggtttaaaaggactgcctggtcgtcctggaccaaatggctttgatgggcaa
aaaggccagcaaggcagaccaggagctggaatccctgggccagaaggcttccgaggcaaa
gctggtgatcctggtgaggaaggtgaaagaggatccaccattaatggtaaaaatggtgct
ccaggtccacctggcccagatggtcagaaaggtgttccaggtgatactacatatggtcct
ccaggaatcccaggcaataggggactgccaggaccacctggtgcacaaggagcaaggggt
gatccaggcattcctgggcttcaagggcagcctggtactccaggatttccaggtgctaaa
ggttttagaggcccagaaggcaatataggagcaccaggctgtccaggcttccctggtcca
ctgtgtgacatgggattaccagggccaccaggactcagaggtgtcataggcctgccaggc
cctcaaggcttaccaggctttaagggtcagaagggagataggggcctagctgggccacct
ggaatcaaaggtctcaagggctctcctggctcacggggccccccaggtcctccaggctcc
cgaggacttccaggacttccaggtaataacggaccacctggcttcccaggacaaacagga
agcaaagggatccaaggaccccaaggattcctaggactcccaggaacacaaggcccaatg
ggaatctctggtgttaaaggtgaagaaggaaaaatgggtccatctgggcctagtggagaa
tgtggggatattggaatgaaaggtgaaagaggacgtccaggagacagtggctccattaac
attcggcttgagaaaggacaaaagggagagccaggctttcctggtgagaatggatttaga
ggtgaaagaggtgaaaaaggcaatataggtttcagaggtgccccaggatttccagggaag
aatggtgtcccaggactgccaggtgaccatggtgacactggactgatggggtttccagga
ttacggggtttcccaggaccaaagggcttcaaaggaatgacaggattccaaggacaacca
ggtgaccagggtgatgtcggcttaccaggaatgcctggaaacccaggattgactggccca
aaaggatctaaaggcaagagaggtgacccaactcttctgcttggtatacgtggtcaaaaa
gggcctcctggagacccaggattaacaggattctgtgggttacctggagagaagggttca
gcaggtatccaaggacaacctggaagactaggatccaagggcgagtctggatacccagga
atacctggatttccaggagctccaggtcctccaggattgccaggagaacctggagaaaaa
gggaaacaaggactttcgggacctccaggattgcaaggattagctggatcgcagggcagg
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcaaaaaggt
tctgcaggagctccaggtcaaagtgaaacagggcgcccaggatactcaggagaacttgga
ccgaaaggtgacagaggtaaacctggatggcccggtatttccattccaggcgcccctgga
gaaaggggatttccaggattcccaggtataagagggcctgttggacctgctggacctatg
ggaagatctcccagtagtgcccctcccggacttccaggtgatcaaggaccacctggttta
gatggcatcagaggtcagcctgggaatcctggtcctcctggagaaaccatctttgtgcaa
ggagatccaggcgacactggtattcaaggggcaccaggcatttctgggcagcgagggcaa
caaggagccagaggtcctccagggaaccaaggaagagaaggcccaaagggtcctatggga
atccatggcccacagggtccacctggtgctgtaggacacccaggagaccaaggttttcaa
gggaaacctggtcctaaaggtcccacaggtttcattggtgaccctggtgaaccaggaaga
agagatgactcatgccctacaattccaggacctcccggggaagcgggacaaagaggagat
gatggctctataggattatcagggccaataggtcatcctggaccccaaggaagaaaaggt
gaagaagggtcctgtggactgccaggtcaagatggtttacctggggcacctggaccacca
ggtgaccaagggcatgtaggagagcaaggatacactggaccacaaggtccacctggccag
actggtatcccaggaccaccaggccctcatgtgagatcttcaagtggattcttgcttgtc
cttcacagtcagtcagacagagaaccaccctgtccacagggaatgccaaagttatggaca
ggctatagcctgctgtacctggaaggacaagaaaaagctcacaatcaagatcttggtcta
gcaggatcttgtcttcctgtatttaatactatgcccttcgcctactgtaatatcaaccaa
gtttgttactatgccagccgaaatgataagtcttactggttgtcaagtgctgctccttta
ccaatgacgccactctctgaagaagaaatagaaccctacataagcaggtgtgctgtatgt
gaggccccagcccaagcagtagcagttcacagccaagatcagtcaattcctccctgcccc
atgaactggagaagtctttggataggatattcttttttgatgcacactggatctggtgat
cagggtggtggacagtcccttatgtcacctggaagttgcttggaagacttcagatcagca
ccattcattgaatgccagggtcagcggggaacttgtcagttttttgctaatgagtacagt
ttttggctaacaacagtgatgcctgaactgcagtttgcatcagcccccttgtcaggaact
cttaaagagggacaagagcagaggaaaaaaatcagtagatgtcaagtctgcctgaagcat
ggttaa

DBGET integrated database retrieval system