Aythya fuligula (tufted duck): 116493016
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Entry
116493016 CDS
T07966
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aful04121
]
116493016 (TRAIP)
Enzymes [BR:
aful01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116493016 (TRAIP)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116493016 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
Crescentin
zf-C3HC4_4
zf_RING_Vps8
GAS
zf-RING_Vps41
EXOC6_Sec15_N
zf-RING-like
RINGv
zf-RING_16
THOC7
FapA
MAD
WEMBL
DUF3450
Fez1
T3SSipB
zf_RING_Vps8_fungal
Filament
MCU
OVT1
Laminin_II
zf-UDP
Motif
Other DBs
NCBI-GeneID:
116493016
NCBI-ProteinID:
XP_032050000
UniProt:
A0A6J3DIS7
LinkDB
All DBs
Position
10:complement(6652535..6668457)
Genome browser
AA seq
501 aa
AA seq
DB search
MPIRAHCAICSDFFDNERDVAALPCGHTFHSACLSRWFEAAPSRTCPQCRTQVSKRHIIT
KLFFNVALEEQAVPDAETLQNELDKAKAQLSAKEKEKRECQAIVDGLRDTLDVRNATIES
LQKVLGETEMLCSSLKKQMKFLEQQQEDNRSSKEEARRLRNKLKTMERIELLLQSQRPEV
EEMIREMGVGQAAVEQLAVYCVSLKKSWGPRSQPVTPNRSCCHCSDTCVTMGTVSGAVSA
PVWEYENLKEARKVSSEMTEKLKKELFAANSKLQRTVSDLENTKEELKSTQKDLKNADKE
ILSLKKKIDILQDTLKVPSVTRETLSRLVFESPAPVELRHPKLHRPAHSDEINLDATFDV
DTPENQPCKSLFSPAKRQKLDKKPPPVVNLAKKVLKETVENWADDLEDEALKGLLPAFIR
NSVHSKKLTAGSLLGSHKNTGTVRMGYDGLGGRTKFIQPTDPAALRPCAVRSKKKTGSRP
GAAAPPASRSSSQARLDGFLH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccgggcgcactgcgccatctgctccgatttcttcgacaacgagcgggacgtg
gcggcgctgccgtgcgggcacaccttccacagcgcctgcctcagccgctggttcgaggcg
gcgcccagcaggacctgcccgcagtgccgcacgcaggtgagcaagaggcacatcatcacc
aagctgttcttcaacgtcgccttggaggagcaggcggtgccggacgcggagaccttgcag
aatgaactggacaaggcgaaggctcagctctctgccaaagagaaagaaaagcgagaatgc
caggccatcgtggacgggctgcgggacaccctcgatgtgcgcaatgccaccatagagtcg
ctccagaaggtgctgggagagacggagatgctgtgttcctctctcaagaaacagatgaaa
ttcctggagcagcagcaggaggataacaggagttcaaaggaggaggcccgccgtctgcgg
aacaagctgaaaaccatggagcggattgaactgttgcttcagagccagcgccccgaagtg
gaggagatgatccgagagatgggagtggggcaggcagcagtggagcagcttgcggtgtac
tgcgtctcgctgaagaaatcctggggacccagatcgcagcctgtcacaccgaaccgctcg
tgttgtcactgtagtgacacgtgtgtcaccatgggaactgtctccggagctgtcagtgca
cctgtgtgggaatatgagaacttgaaggaggctcgcaaggtatccagtgagatgacagag
aagctgaagaaggagctgtttgctgccaacagcaagctgcagagaactgtttcagacttg
gagaacacaaaggaggagttaaaaagcacccagaaggatttgaagaatgcagacaaggag
attttgagtttgaagaagaagatagacatcctgcaggatactctgaaagtgccatctgtg
accagggagacgctcagccgactggtcttcgaaagccctgctcccgtggaactgcggcac
ccgaagctccaccgcccagcccacagcgacgagatcaatctagatgccacctttgatgtg
gacacccccgaaaatcagccctgcaaatctctcttcagccctgcgaaaaggcagaagctg
gataaaaagccgcctcccgtggtaaatctggcaaagaaagttctgaaggaaacagtggag
aactgggcagatgatctggaggatgaggctcttaaagggctgctgccagcattcatcagg
aactccgttcactccaagaagctgacagcgggcagcttgctgggttcccacaagaacaca
ggcacggtgcggatggggtatgacggcttgggaggcagaacaaagttcatccagcctacc
gaccccgcagccctccggccctgtgcggtgaggagcaagaagaagaccggctccaggccg
ggggcggcagctccccccgcgtcccgcagcagcagccaggcgcggctggacggcttcctg
cactga
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