Aythya fuligula (tufted duck): 116493174
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Entry
116493174 CDS
T07966
Symbol
STAB1
Name
(RefSeq) stabilin-1
KO
K19020
stabilin-1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116493174 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aful00536
]
116493174 (STAB1)
Glycosaminoglycan binding proteins [BR:
aful00536
]
Hyaluronan
Cell surface receptors
116493174 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_MSP1_1
FXa_inhibition
Plasmod_Pvs28
EGF
Motif
Other DBs
NCBI-GeneID:
116493174
NCBI-ProteinID:
XP_032050219
UniProt:
A0A6J3DFG3
LinkDB
All DBs
Position
10:7529533..7588459
Genome browser
AA seq
2543 aa
AA seq
DB search
MKMHPPGLLLFFLAACFTPIADCQSQKLRSMRCNVKMMFTMNTACTACAAAPKMLCPRGW
LKTTQGLGMRDCRYTVKLGENTLVQPGCYHICNKEIEEKKCCPGFWGTECYECPGGSENP
CSGHGTCLDGIQRNGTCICKEQYSGYACQNCRDENRFGPDCQSVCDCVHGECNSGVTGNG
SCTCYGGYTGTRCDQELPLCKGVTCEANSECTVKDGTAVCDCKPGYRKSGGTCLAQDPCA
SSPCSPFAVCNVISPQKYQCTCKEGFQGDGKICQPINPCVDNNGGCAENSTICIYKRPGE
ASCVCKPGMSRRSASECFMLSNDCRQYFCDMSSKCEINSHGNPSCVCKEGEIADGRSCYK
DLMSEINQHNSRGKFFRKLDVASKMFASGCSVLLTKYGPFTVFVPSIFPSTNSIEFNDTT
AEHLCRMHIVPGLHLIEDMVKAKTMWTLSGHKLTFNNQAYIKSFQYEDVEEQYNVLQSNL
PAANGVMHIVSTLRKKTSTDNLGNPQKTIGEILASNEIFSRFETILENCGLPAILDGPGP
FTVFVPSNDGVDKLRDGRLIYLFTEGINKLQELVKHHIYTSAAVTVEKLIMMPQIITMAN
QILTISISADGRILMDESGIPLNVRNIVASNGIIHTLDGIFLPPSIIPILPHRCNEEQHK
IVTGSCVDCEALNSSVCPPGSREMESTLFPKECVYIHDPQGLNVLKKGCARYCNQTVMKP
GCCKGFFGPDCIPCPGGYSSPCYGRGNCSDGIAGNGNCHCFEGFKGVACHICSNPNKHGE
NCDEDCGCVHGVCDNRPGSGGVCQSWSCKEGFTGKFCDKTSKNCGPSGLSQYCHQNAVCS
LNDTARCICMDGYEGDGFSCQPIDLCSQPERGGCSQNALCISTGPGNVTCQCNVGWTGDG
KACVSIDNCMLESRGNCHINADCIYIGPGQSKCVCKRGYAGDGHNCDAINPCLMDNGGCH
DMAMCVPLGGGERSCTCPQGYVGDGMTCYGDVLKELAGSSHFAGFYDWVKKSLFSIPAGT
NVTVLVPSEEAINSLNKSEKDFWLTPSTLPVLVRAHFLEGIFTGEKLKKYDKPELPTLNP
QTRWQINTKSGVLTIQNASIVVSDIPASNGIIHVLSKVLLPPLGDIPPSPPGLQKRLDTV
SSFSTFKDLLHQYQLIGKIESSDKYTVFVPGNNSIEEYCQAHNVTQLDNETVQYHVILGE
KLLPTDLRSGIHKNSMLGLSYWLMFYQNSTQKFVNDIPLDGKFFETKNGMLIGVSQVLQI
RKNRCTANTTTIQKSRCGKCEKGIKCPPGSVLVELPGSKNLAHCKLRSGDTGCHFTCAKV
SLRSVCCPGYYGHMCEMCPGKPGQWCSGNGECQDGIEGSGECRCLEGFHGTACEMCEVGR
YGADCKSECACDNGICNDGLQGDGSCDCFPGWKGPTCQERIKTDLCNNTCHQMANCLNGS
ADSPPMCSCSAGYTGNGTHCTEIDPCIIDHGGCSINAVCTKVSPGERTCVCKEGYAGDGT
LCLEIDLCLESNGGCHANAECVKTGPRKVACNCLPGYSGDGVSRCNPINLCEQNNGGCSP
FGLCKYTGPGTRNCSCSWYSVGDGFTCHGKVYQELARIKDASVFFKMILAENTKELSGAG
PFTVFVPRADFIANTTTFEEWKSRGLLRELLRYHMVGCQKLLLSDLEDQESLTSLSGHKI
TITEKENSIYLNGEAKVVTGDIVGVNGVIHFINKILIPSDLVDHNISLKISQQNITEVAE
AFGYTIYSKLLKDAELLPLISNPLHRPFTMLWPTDAAFNALSEKRQEWLYRREHRDMLAS
YLKAHMIRDTKIVAGNMPQVKFIRTMHGSTISFSCSKTHTGELMVGNGDAMIVQRHMEFS
GGIAYGIDKLLEPPDLGSRCDEFVFVELQRSPESCGLCGFEPPCPPGSVHRGGTRGCYYY
GNQLFRNTFLFHHSSLLRPSWPPSPWDPLRRHFSSRGSRKQGCERICISTQWVPQCCKNH
YGRDCRACPGGLEAPCGNRGTCDDKIRGSGRCNCSQAFIGTSCELCAPGRYGPSCQECKC
TENGVCNGGLHGDGFCFCAEGWTGERCETRLVMTPECSPPCHPQAACRSGNLCECNLHYE
GDGRMCTVIDMCSQDNGGCAAQAQCTQVGVNISCACAAGYRGDGYVCDPIDRCADGRNGD
CSEHAKCISTGPNERRCECKRGYVGDGIQCLEEAVPPMDRCLDNNGQCHREAICTDLHFH
DKTMGVFHLQSPRKKYDFTYEQAQRACAAEGASLATFRQLSAAQQMGFHLCLVGWLDNGT
AGYPTAYPNPSCGANRVGIVDYGTRSNLSETWDAFCYREKDLVCNCREGFVGDGYSCNGK
LPEVLADHPRFSTFYSMLLDFANDTEEGLDFFIYLSDDSAPKTLFVPLNSGFAKNETLTG
EELKLHVSSSNVVLFSFNLTAGTNITSQSGHDLHVSDLPVGNGTEQAGARGINDKMIVEW
DIVASNGIIHAIAEPLRIPPPAVHISQVNGRAQPGGSVAVGLASALGLALVLAAGAGVAY
CWVKRRQRDGQFGYLQVRTGGEP
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcatcctcctgggttgctgcttttcttcttagcagcatgcttcactcccata
gctgactgccagagtcagaagctaaggtcaatgagatgcaatgtcaagatgatgtttaca
atgaatacagcatgtactgcttgtgctgcggcacctaaaatgttgtgtccgagaggctgg
ttaaagaccacgcaaggcttaggaatgagggactgcaggtacactgtcaagttaggagaa
aatacccttgtccagccagggtgctatcacatatgtaacaaggaaattgaggagaaaaag
tgctgcccaggattctggggtacagagtgctacgaatgtccaggaggctccgaaaatccc
tgcagtggccatgggacatgcctggatggcatacagcggaacggaacctgcatctgcaag
gagcaatacagtggttatgcctgccagaattgtcgagatgaaaatcgttttggcccagac
tgtcagtcagtgtgtgactgtgtgcatggggaatgcaacagcggcgtcactgggaatgga
agctgcacttgctatggaggctacactggcaccaggtgtgaccaagagcttcccctttgc
aaaggtgtgacgtgtgaggccaacagtgaatgcacggtaaaggatgggacagcggtgtgt
gactgcaagccgggatacagaaaaagtggcggcacttgcttagctcaggatccttgtgca
tcttctccttgctccccctttgctgtatgcaatgttattagtccacaaaagtatcagtgt
acctgcaaagaaggatttcaaggagatgggaagatttgtcagcccataaacccctgtgtt
gacaacaatggaggctgtgcagaaaactctacaatctgcatttacaaacgcccgggagag
gcatcctgtgtttgcaagcctgggatgagtaggagatctgcatcagagtgttttatgctt
tccaatgactgccggcagtatttttgcgacatgtcttccaagtgtgaaataaactcccat
gggaatcctagctgtgtgtgtaaagaaggggagattgcagatgggagaagttgctataaa
gatctcatgagtgagattaatcagcataattcacgaggaaagttttttaggaaattggac
gtcgccagtaaaatgtttgcttctggttgttcagtgttgctgacgaaatatgggcctttc
acggtctttgtaccctccatttttccaagtactaatagcatagaatttaatgataccact
gctgagcatttgtgcagaatgcacattgttcctggtctgcatttgatagaagacatggta
aaagccaagacgatgtggaccttgtcaggacataagctgacattcaacaaccaggcatac
atcaaatcatttcaatatgaagatgtggaagaacagtacaatgttttgcagtcgaaccta
ccagcagccaatggtgttatgcatattgttagcactctaaggaaaaaaaccagcaccgac
aaccttggaaacccacagaaaaccattggggagatccttgcttcaaatgagatcttcagt
cgatttgaaactatactggagaactgtggcctgcctgcaattcttgatggacccggcccc
tttactgtatttgtacccagcaatgatggtgtggataaattgagagatggaaggctcatc
tatcttttcacagagggcataaataagcttcaggaacttgtgaaacatcatatctacact
tcagcagcggtgactgtagaaaaactgataatgatgccacaaatcattactatggccaac
cagatactgaccatcagcatcagtgcagacggaagaattctgatggatgaatcagggatc
cccttaaacgtgagaaacattgtggcatcaaatggtattattcataccttggacggcatc
ttcctccctccttcgataattcccattttgcctcacagatgcaatgaggaacaacataaa
attgtgacaggctcttgtgtggattgtgaggctctcaacagcagtgtttgcccacctggc
agcagagaaatggaatcaacactgttcccaaaagaatgtgtctatatccatgatccacaa
ggcctgaatgtactgaagaagggatgtgccaggtactgcaatcaaacagtcatgaaacct
gggtgctgcaaaggattctttggtccagactgcataccgtgcccagggggatattccagt
ccatgctatggccggggaaattgcagcgatggcatagcagggaatggcaactgccactgc
tttgaaggcttcaaaggagtagcctgccacatctgttcaaacccaaacaaacatggcgag
aactgtgatgaagattgtggctgcgtccatggtgtctgtgacaacaggcctggcagcggg
ggtgtgtgtcaatcctggtcctgtaaggaaggttttactgggaaattctgtgacaagaca
tccaagaactgtggcccgagcgggttgtcccagtactgccaccagaatgctgtttgcagc
cttaatgacacagcaaggtgcatctgcatggatggatatgaaggggatggattttcctgc
cagcccattgacctgtgcagtcagccagaacgaggaggctgttcccagaatgccctgtgc
atcagtacaggccctggcaatgtcacctgccagtgtaacgtgggctggactggggatgga
aaggcctgtgtgtctatagacaactgcatgctggagagcagagggaactgtcacatcaat
gctgactgcatttatatcggccccggtcagagcaaatgtgtctgcaagaggggttatgct
ggcgatggccacaactgcgatgcaatcaacccatgcctcatggacaacggcggctgccac
gacatggctatgtgtgtacctcttggaggaggggagaggtcctgtacctgccctcaaggc
tatgtgggggatggcatgacatgctatggagatgttctaaaagagctggctgggagttcc
cactttgcaggcttctatgactgggttaagaaatctctcttcagcatcccagcaggaacc
aatgtcactgtcctggtgccatcagaggaagctatcaacagcttgaacaagagtgagaaa
gatttctggctgacccccagcacgctgccagttttagtcagggcccactttcttgaaggt
atcttcactggtgaaaagctgaaaaagtacgacaagccagaattacccaccctcaaccca
cagaccagatggcagataaacaccaagagtggtgtattaaccattcaaaatgcaagtatt
gtcgtcagcgacatccctgccagcaatggcattattcatgtcctcagtaaggttttgttg
ccacctttaggagatatcccaccgagtcctccaggtctgcagaaacggctcgatacagtt
tcctcattcagcacattcaaggatttgttacaccaataccagctcattggaaaaattgaa
tccagtgacaaatatacagtttttgttcctggaaataattccattgaggagtactgccag
gctcacaatgtgacacaattggacaatgagacagtgcagtaccatgttatattgggagag
aagctcttgcctacagatttgagaagtggaatccataaaaatagcatgctagggctctcc
tactggttaatgttttatcaaaacagcacccagaagtttgtcaatgatattcctttggat
ggaaaattctttgagacgaagaatggcatgttgattggggtttcacaggtcctccagata
cggaagaatcgttgcacagccaataccacgaccatacaaaagtcaagatgcggcaagtgt
gagaaggggatcaagtgtcctcctggatcagttcttgtggaacttccaggaagcaagaac
ctcgctcactgtaaattgcgctctggggatacaggctgccatttcacctgtgcaaaagtt
tctctgaggtctgtctgctgccctggctactacggacacatgtgcgagatgtgcccaggg
aagccaggccagtggtgctccgggaacggggagtgccaggatggcatcgagggcagtgga
gagtgccgatgcctggaaggtttccacggaactgcctgtgaaatgtgtgaagtgggccga
tacggagccgactgcaaatcagaatgtgcctgtgacaacggcatatgtaatgatggactg
caaggcgatgggagctgcgactgtttccctgggtggaaaggcccgacctgccaggaaaga
atcaagactgacttatgcaataacacttgccatcaaatggccaactgcctgaatggctcc
gcagattccccacccatgtgctcctgctctgctggatatacagggaatggaacccattgc
acagaaatagatccatgcattattgatcacggtggctgctccataaatgccgtgtgtact
aaagtgtccccaggagagagaacctgtgtttgcaaggaaggctatgctggagatgggacg
ctgtgcctggaaattgatctgtgtcttgaaagcaacggggggtgccacgccaacgcagag
tgtgttaaaacaggcccacggaaggttgcctgcaactgtcttcctggttacagcggggat
ggcgtgagccggtgcaaccccatcaacttgtgtgaacagaacaatggaggctgtagtccc
tttgggctctgcaagtacacgggtcctggcactcgaaactgctcctgctcttggtacagt
gtcggagatggcttcacctgccatggcaaagtatatcaggagctcgcaaggatcaaagac
gcatccgtgttctttaagatgatactggcagaaaacaccaaggagctcagtggagcaggg
cctttcactgtcttcgtcccacgggcagatttcatagcaaacaccacaacatttgaggag
tggaagagcagaggtctcctccgggagctgcttcgctaccacatggtgggttgccagaaa
ctgctgttgagtgacctagaagaccaagagtcccttacatctttatctggccacaaaata
acgatcacagagaaagagaatagcatctatctcaatggggaagccaaagtggtgacgggt
gacatcgtcggcgtgaatggggtcatccattttatcaacaagatcctcattccaagtgac
ctggtggaccataacatttccttaaagatctcacagcaaaatatcacagaagtggcagag
gcctttgggtacaccatttatagcaagctgctgaaggatgcggagctgctgccactgatt
agtaaccctctgcatagacccttcaccatgctgtggcctacagatgctgcattcaatgcc
ctttcggagaaaaggcaggagtggctgtaccgcagagagcatcgggacatgctggcctcc
tacctcaaagcacacatgatcagagacacaaagattgttgctggtaacatgccccaagtc
aagttcatacggaccatgcacggctccaccatctcattcagctgcagcaaaacccacacg
ggggagcttatggtggggaacggtgatgccatgatcgttcagaggcacatggagttcagt
gggggcattgcttatggcatcgataaactgttggagccaccagatctgggatctcggtgt
gatgagttcgtcttcgttgagctgcagagatctccggagagctgcggactctgtggcttc
gagccgccctgccctcctggctcagttcatcgggggggaaccaggggctgctactattac
ggaaaccagctgttcagaaacacttttctgtttcaccactcctccttgttgcggccatcc
tggccgccctccccgtgggaccccctcagaagacacttctcttccagggggtctaggaag
caaggctgtgagaggatctgcatttccacccagtgggtcccccagtgctgcaagaaccac
tatggccgcgactgtcgggcatgcccgggagggcttgaggcgccatgcggtaaccgtggt
acctgcgacgacaaaatccgaggctctgggaggtgcaactgcagccaggccttcattggg
accagctgtgagctgtgtgctcctggcagatacgggcccagctgccaagaatgcaaatgc
acggagaacggtgtgtgcaatggaggactgcatggcgatggcttctgcttctgtgctgag
ggctggactggagaacgctgtgaaaccaggctagtcatgacacctgaatgctcgccgcca
tgtcatccccaagctgcctgccgctccggcaacctctgcgaatgcaacctacactacgag
ggagatggtagaatgtgcacagtgattgacatgtgcagccaggacaacggggggtgtgct
gcacaggcacaatgcacgcaggttggtgtcaacatctcctgtgcctgtgctgctgggtac
cgaggagacggctacgtctgcgaccccatagaccggtgtgcagatggaaggaatggggac
tgcagcgagcacgccaagtgcatcagcactggtccaaacgagcggcgctgtgagtgcaag
cggggctatgttggcgatgggatccagtgcctggaggaggcggtgccacccatggaccgg
tgcctggacaacaacgggcagtgccaccgggaggccatctgcaccgacctgcacttccac
gataagacgatgggtgtatttcatctgcagtcaccccgaaagaagtatgacttcacttac
gagcaggcacagagggcctgcgcggcagaaggcgcctccttggccactttccggcagctc
tcggcagcacagcagatgggattccatctgtgcctggtggggtggctggacaacggcacg
gctggataccccacggcctaccccaaccccagctgcggggctaaccgggtgggcatcgtg
gactacggcaccagaagcaacctgagtgagacctgggatgccttctgctaccgggagaag
gatctggtgtgcaactgccgggaaggatttgtgggagatgggtattcctgcaacggcaaa
ctccccgaggtgctcgcagaccaccctcgcttctccaccttctattccatgttgcttgat
tttgccaatgacacagaagaaggattggattttttcatctatttgtccgatgactccgct
cccaaaactctctttgtgcccctgaattctggctttgcaaaaaatgaaacactgacagga
gaagaactgaagcttcatgtgtcatccagcaatgttgtgctcttcagcttcaacctcaca
gcaggcaccaacatcacatcccagtcaggacatgatctccacgtgtcagaccttcccgtg
gggaatggcacagagcaggcgggtgccaggggaatcaatgacaagatgatcgtggagtgg
gacatcgtggcttccaatggcatcatccacgccatcgcggagccactgaggatcccaccg
cccgccgtgcacatcagtcaggtcaacggcagggcccagcccgggggctctgtggccgtg
gggctggcatcagccctgggccttgcactggtgctggcggccggcgctggagtcgcctac
tgctgggtgaagcggcgccagcgggacgggcagttcgggtacctccaggtacgaacgggg
ggggagccctag
DBGET
integrated database retrieval system