Aythya fuligula (tufted duck): 116493273
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Entry
116493273 CDS
T07966
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04260
Cardiac muscle contraction
aful04261
Adrenergic signaling in cardiomyocytes
aful04814
Motor proteins
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116493273 (TPM1)
04820 Cytoskeleton in muscle cells
116493273 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116493273 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
116493273 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aful04812
]
116493273 (TPM1)
04147 Exosome [BR:
aful04147
]
116493273 (TPM1)
Cytoskeleton proteins [BR:
aful04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
116493273 (TPM1)
Exosome [BR:
aful04147
]
Exosomal proteins
Exosomal proteins of microglial cells
116493273 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
TMF_DNA_bd
ERM_helical
PUMA_CC
Laminin_I
CENP-F_leu_zip
ATG16
Lebercilin
DUF745
TMP_N
MscS_porin
GAS
ADIP
DUF4200
Fib_alpha
DUF1664
MAD
Motif
Other DBs
NCBI-GeneID:
116493273
NCBI-ProteinID:
XP_032050383
UniProt:
A0A6J3DM00
LinkDB
All DBs
Position
11:7344798..7365029
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKY
SESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgcttaaactggacaaggagaatgccttggac
agagccgagcaagccgaagcggacaagaaggcagcggaggagaggagcaagcagctggag
gacgagctggtggctctgcaaaagaagttgaagggcactgaggatgagctcgacaaatac
tccgagtcccttaaagatgcacaggaaaagttggaactggctgacaaaaaggccacagat
gctgagagcgaagtagcttctctgaacagacgcatccagctggttgaggaagagttggat
cgggctcaggagcgcttggctactgccctgcagaagcttgaggaggctgagaaggctgca
gatgagagtgaaagaggaatgaaagttattgaaaatagagcccagaaggatgaagagaag
atggaaatccaagagatccagcttaaagaagctaagcacattgctgaagaggccgaccgc
aagtatgaagaggtagctcgtaagcttgtgatcattgagagtgacctggagcgagctgag
gaacgtgctgaactatcagaaagcaaatgtgctgagcttgaagaggagttgaaaactgtg
accaacaacctgaagtcgctggaggctcaggctgagaagtactcacagaaagaagacaaa
tatgaggaggagattaaagtcctgactgacaaactgaaggaggctgagacccgtgctgaa
tttgctgagaggtcagtaaccaagctggagaagagcattgatgacctagaagagaaagtg
gcgcatgccaaagaagaaaaccttaatatgcatcagatgctggatcaaactttactggag
ttaaacaacatgtga
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