Aythya fuligula (tufted duck): 116493604
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Entry
116493604 CDS
T07966
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116493604 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116493604 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aful04147
]
116493604 (VPS36)
Membrane trafficking [BR:
aful04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
116493604 (VPS36)
Exosome [BR:
aful04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116493604 (VPS36)
Exosomal proteins of colorectal cancer cells
116493604 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF1351
TssO
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
116493604
NCBI-ProteinID:
XP_032051002
UniProt:
A0A6J3DN74
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Position
1:179591548..179611502
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AA seq
386 aa
AA seq
DB search
MDRFCWSSGLLELGETLVVQQRGVRLYDGEEKVKFESGVLLLSTHRLLWRDQKNHECCIA
IPLSQVVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RFSEEITQRRWENMPTGQTFQVAKGPQAGRTRAIGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLAGMLQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVLELQSHNEEEMVASALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatcggttctgctggagcagcgggctgctggagctgggggagacgctggtggtgcag
cagcgcggtgtgcgcctctacgacggggaggagaaggtgaaatttgagagtggagtgtta
ctgcttagtacacacagactgctttggagggatcagaagaaccatgaatgctgcattgct
atacctctgtctcaggttgtctttattgaagagcaagcagctgggataggaaaaagtgcc
aaaatagtagttcatcttcatcctgcttcctcaaacaaagagcctggtccgttccaaagc
agcaaatattcctacatcaaactttctttcaaagaacatgggcagatcgagttctataga
cgattctcagaagaaatcacccaaaggagatgggagaacatgcctactggtcagaccttt
caggttgccaagggtccacaggcaggaagaacaagggctataggaattgtagggatcgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagtaaactaatggagaaggctaaggaaatggtggagttatccaagtcaatagctaat
aagattaaagaaaagcaaggtgacatcaccgaggatgagaccattaggttcaaatcatac
ctgctgagtatgggtatagctaatccagtcactagggaaacgcatggatctggtacccat
taccacatgcaactggcgaaacaactagctggaatgctgcagacaccattagaggagaga
ggaggaatcatgtcgctcacagaagtgtactgtctggtaaatcgtgcacgaggattagag
ttgctctcacctgaagatttagtaaatgcttgtaagatgctggagtccctgaaattacca
ctaaggcttcggatatttgacagtggtgtgatggtgcttgagctccagtctcacaacgaa
gaggaaatggtagcttctgctttagagacagtatctgaaaaaggttctctcacagctgat
gagtttgcaaagctggtggggatgtccgttctcttagccaaagaaaggctgcttctcgct
gaaaagatgggccatctctgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctaacacaaagctaa
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