Aythya fuligula (tufted duck): 116493826
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Entry
116493826 CDS
T07966
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116493826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116493826
03036 Chromosome and associated proteins [BR:
aful03036
]
116493826
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116493826
Coactivators
SAGA/TFTC/STAGA complex
116493826
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116493826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
116493826
NCBI-ProteinID:
XP_032051262
UniProt:
A0A6J3DNX8
LinkDB
All DBs
Position
12:complement(11376806..11520393)
Genome browser
AA seq
1058 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEAPQPRTSAPSQQQQPQQ
QQQQGSLAGGSSPVRQQQGHPAPPPAPAAEEAAGRPGAAESRAPAQGPLPSPSPPAAAAV
SAAAAAAGRGVSVNSSSVQQSHGAALLSGSSSSSSPAAPAPPQPAGPPAQPVTTTTTTHP
HAAARDAASPGPGGSPPAADCPPPLRAGAEAAGGSGAGGGGRRGAEEEESEESTAAAASS
TPSSALPGEAAPNGEGGGARPAAVPPVSNHQSRGSADASPAQPKPPHGPLPALNALGNSA
SPAPAAGAATPPGQGSVANCAPPPSAAVAPGGGPKPAGVAKAGAALPAAPQALSPRPALG
AAPRIVAPQLIVRPPQQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQVQ
TQGQGPTSISPRLSVPTSGPVFRLSTAQQPTSVATSTVRLGLPVQAKVVQSTATPVSATS
AATLPGGSILSHTTVSVVSTSTQNVFKTTVATGTSASQQPAVITGGQTQASAQTQGQPRL
PLPPHTTAQVPAQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETS
RNVKALVQDLLDAKIDPEEFTGRLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQ
GQPSQQSLQQTKLSQVIPQSASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQ
SNQSSQLQIIQSTSAQTVKRNPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGF
GVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQIQSCK
DEPFLAAIPLHKRILEMAKKLGITDVPAEVVTFISHATQNRLRTVIEKVTVITQHRMESY
KDDEWYEQATDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKA
KEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGLLTIGGEGLSMSGGSQAGLGTPSS
RQYARQKITRVNLRDFIFYMEQERETSHSLLLYRALLK
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggaccccctggaagagatgctgctcttctccgaggaggtggac
gagaaggcggtcagcgacctggtgggctccttggaatcgcagctggccggcggccggggc
tccgccgaggcgccccagcccaggacctccgccccgtcccagcagcagcagccgcagcag
cagcagcagcaggggagcctagcggggggcagcagccccgtccggcagcagcaagggcac
cccgctcctcccccggccccggcggcagaggaggcggcggggcgccccggagccgcggag
agccgagcccctgcccaggggccgctcccgtccccgtcccccccggcggcagcggcggtg
tcggcggcggcggcggcggcagggcggggagtgagtgtaaacagtagtagtgtgcagcaa
tcacatggagccgctctcctcagcggcagcagcagcagcagcagccccgccgcccccgcc
ccgccgcagcccgccggcccccctgcccagcctgtcaccaccaccaccaccacccacccc
cacgcggctgcccgggacgcggccagccccggccccggcggcagcccgcccgccgccgac
tgcccgccgccgctgcgagccggagccgaggccgcgggggggagcggggcggggggcggc
gggcggcggggagccgaggaggaggagagcgaggagagcaccgccgccgctgcctcctcg
acgccctcctcggcgctccccggcgaggcggcgcccaacggggaaggcggcggtgcccgg
ccggcggcggtgcccccagtcagcaaccatcagagccgcggcagcgccgacgcctccccg
gcgcagcccaagcccccacacggcccgctccccgcactaaacgcactcggcaactccgcc
agccccgcgcccgccgccggcgctgccaccccgccgggacaaggctcggtcgccaactgc
gccccgccgccctccgccgcggtggcgcccggcggcggccccaagcccgcgggcgtcgcc
aaggcgggcgctgcgctccccgccgccccccaggcgctgtcgcccaggccggcgctgggc
gctgcccccaggatcgtggccccccagctgatcgtcaggccgccgcagcagaccaccatc
cagctgccgccgggcttcacgataccgccgggtatggtcttggtgcgcacggatgctgga
caacttgtaatggtgcctcagcaggctctagcacaggctcaaatgcaggctcaagtacaa
acacagggacagggtcctaccagcatttcacctagactttcagtgcccacaagtggccca
gtttttcgcctgtcaacagctcagcaaccaacttctgtagccacatctactgtccgccta
ggacttccagtgcaagccaaagttgttcaatcaactgcgacacctgttagtgctacgtct
gctgcaactctgccaggaggctctattctttcacataccacagtatcagtagtttcaaca
agtactcaaaatgtattcaagaccacggtagcaactggaacatcagcatctcaacaacct
gcagtaattactggtggacaaactcaagcttcagcacagacgcagggtcagcctcggctg
ccacttccacctcatacaacagcacaagtaccagcacagccccaagtaataccaagctct
cctgtacctggaactacagttgtatcacaggaaatgcaagaaaatgtgaaaaaatgcaaa
aactttttagctactcttataaaacttgcttctcataattcaccttctccagaaacgtcc
cgtaatgtgaaagctctggttcaggatttgttggatgcgaagattgatccagaagaattt
acaggccgcctgcaatcagaactgaaatcatctccccagccatatcttgtacctttcctt
aagaaaagtctacctgcattgagacaatctttactgaatagtcaacattcagttttgcaa
ggacagccgtctcagcagtcacttcaacaaaccaagctatcacaagttatacctcaatct
gcctctggaagtatttcctctgttgtcacaacgcagacaataggaataaggcaaccaaac
aacatttgcacagtctctgtatcaaatacagtgcagcctcctcaggttaaggtggtacag
tcaaatcagagttctcaactgcagattatccagtcaacatctgctcaaactgtgaaacga
aaccctgcttgccagactacccagattaggatgccagtggtaataactcagaccattaga
ccacaaggcacagtagggaaggcaccaacaatacaagccagcaaaagtcctgggggcttt
ggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccctggaggtggttctttc
agagatgatgatgacatcaatgatgttgcatctatggccggtgttaatctaaatgaagaa
agtgcccgaattatggctaccaactctgacttggttggaacccagatacagtcctgtaaa
gatgaaccctttcttgctgctatacctctacacaaacgaatacttgaaatggctaaaaaa
ttaggaattactgatgtgccagctgaggtggttacttttatttcccatgcaacacaaaac
agattaagaacagtgatagaaaaagtaacagtgataactcagcaccgcatggaatcgtac
aaagatgatgagtggtatgaacaagctacagatgtccgatcacagctaaagttttttgaa
cagttggagcgtttagaaaagcaaaggaaagatgaacaagagagggaaatcttgctaaag
gctgccaagagtcgctcaaggcaagaagacccagagcaagctagactgaaacaaaaagca
aaggagatgcagcaacaagaacttgcacaaatgaggcagagggatgccaatttaactgcg
ttggcggctatcggtccccggaagaaacggaagcttgattcacctggactgctcaccata
ggaggagagggcctcagtatgtctggtggaagtcaggctggcttggggactccttcatcc
aggcagtatgcccgacagaaaataactcgcgtaaacctcagggacttcatcttctacatg
gaacaggaaagagaaacgagccattctctcctgctctatcgagctctgcttaagtaa
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