Aythya fuligula (tufted duck): 116494017
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Entry
116494017 CDS
T07966
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116494017 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116494017 (EDC4)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116494017 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
116494017 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Uteroglobin
WDR55
Motif
Other DBs
NCBI-GeneID:
116494017
NCBI-ProteinID:
XP_032051602
UniProt:
A0A6J3DPW6
LinkDB
All DBs
Position
12:complement(9701545..9734269)
Genome browser
AA seq
1402 aa
AA seq
DB search
MASSNSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSL
AKPVHRNVSLGALQEKQVICLSGDDSSTCTVILAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYALRAASNGSAMVRVLSISTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLSMDKDKIQEEILVNIKRPDNTPLNTSRRIIWCPFI
PDDNEENGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPNIKEGFIVVKGHSTYLS
EGALSPDGTVLATASHDGFVKFWQIYIEVQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVCFSPDIFSSMSVLPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMGASVPSHGSH
EEFAFPDHIADLGTEGLGSEKGSVHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAF
MTPSASLQQITVSPGSSVSSLTAVTAMSSTSVTDASMSRPSEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNSSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLEPNHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENACSDSVVGQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
TQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQQR
ELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQL
QEHLSQQLSQSLSTAVCNRLERTVREEMKKTVPQCISKSIDPVASQLSNTIATKLTAVEG
TLKESITKLVKSKNLTDSIVRATADTLQGTIQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSTTEQLASTVTASIHAE
VQHQLHIIVGNLQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHL
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLLQFLQVEPHN
TLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccaacagcatcgacatcgaggacgcgacccagcacctgcgggacatcctc
aagctggaccggccgggaggttcagtaaatgagaaccagagaccatcaaattcctacaat
ggagacctgaacggactgctggtgcctgatcccatcgtggccggcgatggaccttccttg
gcgaaaccggtgcatcgcaacgtttctctgggagccttacaggagaagcaagtcatctgc
ctttctggtgatgacagctccacttgcacagtaatattggcaaaagatgtggagatagtg
gccagcagtgattccagcatcacaagtaaggccagaggaagtaacaaggtgaaaatacag
cctgttgctagatatgactgggagcagaaatactattacggcaatctgatagctgtttca
aactcttacctggcttatgcccttagagctgccagtaatggctccgccatggtgcgagtg
ttgagcatcagcactgctgagaggaccttgctgaagggattcacaggtggcgtggcagac
ctggcttttgctcatctcaactccaaccagctggcgtgcctggatgaggctggcaacctt
tttgtctggcgcctgtccatggataaagacaaaatccaagaggagatcttggtgaacatc
aagcggcctgacaataccccactgaacacctctcggagaatcatctggtgtcctttcatc
ccagatgataatgaagagaatggtgaagagggaagtcaaacgttggcattgctgcatgag
gacagggcagaggtatgggatttggacattatccgaacaaacaacagctcctggccagtg
gaagtgcctaacatcaaagaaggcttcatcgtagtaaaaggccacagcacgtacctgagc
gagggagcgctttctccagatggaactgtgttggccacagcaagtcatgatggctttgtc
aaattctggcagatctatattgaggttcaagatgagccaaggtgtcttcatgagtggaaa
ccacatgatggtaggcctctttcctgcctgctcttctgtgacaaccataaaaaacaagac
ccagaggttcctttctggagatttctcatcacaggagcagatcagaacagagaactgaag
atgtggtgcactgtgtcttggacgtgtctgcagactgtctgcttttctcctgacatcttc
agctccatgagtgttcttcccagcctgaaagtctgcctggacctctccgctgagtatctg
atactgagtgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
gaaggcaaagcttacttcagctccatctcagagttcctcctcacccacccagtcctgagc
tttggcatccaggcagtgagccgctgccggttaaggcacactgaagtgctcccagcagaa
gaggaaaatgacaacttgagtgtcgaaggtgctcagggagcaggggctgttgagtcagcg
gcaggcgtgctgataaaactcttctgtgtgcacactaaggccctacaggacgtgcagatt
agattccagcctctccatagtcctgatatgggtgcatctgtgccttcccatggctctcat
gaagaatttgcctttccagaccacatagccgatctaggcacagaagggctgggatctgaa
aaaggatctgttcatggctctcaaccagacttgcgacgtattgctgacctgcctgtacca
gcagacttccttgctctctcaaatgatgccaaaccaaagttgatgactccagatgcattc
atgacaccgagtgcatctcttcaacagatcaccgtatctccaggcagcagcgtcagttcc
ctgactgcagtcacagccatgagtagcacttctgtcactgatgcctctatgtccaggcca
tcagaagacttgactgtgagccccaagatgcagctggacaccagcctcacgctgagcagc
agtagcagcagtctccagaccagtcctaggagccattcagttcttatcccgggcctccct
gacaagctaacaccaaaggcacctgttccagtcacaccaggaaattcttctctagcactg
gaactgcaggaagtggagcccttggtggtgccccaggcttctcccacccgtgagcgttcg
ccagatgtcatttcctctgcttccacagccatgtcccaagatatcccagagattgcttcc
gagaccttgcaacgcagcttcgcagctgctccatctgggctccctgcggaggtgctggag
cccaaccatcatgcagacagtatggcatctgctgcctcagccttacatttgctgtctcca
aggaaccggcacaattctgagcatagccaccactccttggacatgcctccagtggaggta
gacagactgaatgctccgtcgttactggagactgctttaactcaggaaaatgcatgttct
gacagcgttgtgggtcagccatggccagcagctcctgacataaccagagaaactaggaac
agcatggcagacagcccaagggatgaagttgaagaaaagcacaagagctcttcctatcat
cgacacagctaccacctgctgcagcatgacagccaggatgctagtgcagaacaaagtgac
catgatgatgaagttgcaagtttggcttctacgtcaggtggatttggtgccaaagcgtcc
acgcagaggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaag
ctaaagcggaagggcaagaaagatgacggggatgtgaaccagtcaccaagatcatccaac
aaccaggtgacaccggagttccaggatgagctgatgtgtatattgaggagccaacagcgg
gagctctctgagctgcgtcagaaccagatggagctgctgcagagactcaccgatcacctt
gatgccattcagagctccctcatgggccatgtggagagggtgattgactctcagcaggag
caggagcagagaagactggaccgagcactgacggaaggacagcagcgcaatgggcagctc
caggagcatctgtctcagcagctctctcagtccctttccactgctgtgtgtaaccgtctg
gagaggaccgttcgtgaggagatgaagaagacagtaccccagtgcatttccaagagcata
gaccctgttgctagccagctgagcaacactattgccaccaagctcacggctgttgaaggg
acactgaaggagagcatcaccaagctagtgaaatcaaagaaccttacagatagcattgtg
agggcaacggctgataccctgcaggggacaatccagtcggcctacagggaagcgttccag
agcgtggtgttgccagcctttgagaagagctgccagtccatgttccagcagatcaatgat
accttcaagcagggcacccaggaatacatccagcagcttgagactcacatgaagaacaag
aaggcgcgagaacaggaggcccgggacccgttgctgaatcagcttcgacagctcatcagc
accttccagagcaccaccgagcagctggcttccactgtcacagccagcatacacgctgag
gtgcagcatcagctgcatattatcgtgggcaacctgcaggagtctattttggcccaagtg
cagagagtcattaaaggagaagtgagcctggctatgaaggagcagcaagcagcagtgacc
tcaagcattgtccaggcaatgcgctcagcagcagggactccgatcccctctactcacctg
gacttccagtctcagcaaactcacatcctgcagcttctccagcaggggcacctcaaccaa
gctttccagcaggctctaacagcagctgatctcaatctggtcctgtatgtttgtgagaca
gtggatactcagcaagtatttggacagcacccatgcccgctgtcccagcctgtgctgctc
tctctcattcagcagctctcctcggatttgggtactcgtacggaactgaagctgaattac
ctggaggaagcggtgatgcacctggaccacagcgaccccatcacccgagaccacatgggg
tcagtcatgaaccaggtgcggcagaagctcttacagttcctgcaggtggaaccccacaac
acgctgagcaagcctgcccgccgcctcatgatcatgcttcagggcctggtcactcctggc
atgacctag
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integrated database retrieval system
