Aythya fuligula (tufted duck): 116494055
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Entry
116494055 CDS
T07966
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aful04812
]
116494055 (KATNB1)
Cytoskeleton proteins [BR:
aful04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
116494055 (KATNB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Katanin_con80
WD40_Prp19
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_RIG_1st
eIF2A
RMC1_N
WDR54
Beta-prop_WDR19_1st
PROPPIN
VPS8_N
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_IP5PC_F
Beta-prop_IFT140_2nd
Beta-prop_pof12
WD_LRWD1
Beta-prop_ACSF4
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
116494055
NCBI-ProteinID:
XP_032051649
UniProt:
A0A6J3DM34
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Position
12:complement(10364839..10381656)
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AA seq
657 aa
AA seq
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MAAPVSTKAAWKLQEITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTSPIESLQININEELIVAGSQSGSIRVWDLEAAKILRTLFGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
MMFEFTGHAGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSYAQSTVSSFVV
DLSRVTKSGSVPHGLIRDDKPLMQPTPTGSSLRRIYDRPSTSCSKPQRVKHNSESERRSP
SSEDDRDEKESKAEIQNPEDYKEIFQPKNAISRTPPRNSEPFPAPPEDEPVTAKEAVKPN
QAVEVQTPLPKQEFPDQIQRPPIASSTPVTRAELSVIPAARNEPIGLKATDFLPAVKNQS
QTELVDEEAVSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKNSVDSAVAINDLSVVV
DLLNIVNQKASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLA
APPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtcagcaccaaggcggcctggaagctgcaagagatcacagctcacagc
agcaatgtgtcctcgctagtcctggggaagagttcaggccggcttctggcaaccggagga
gatgactgtcgagtcaacatatggtcagttaacaagcccaactgcatcatgagcttgaca
gggcacacgtcacccattgagagtctacagatcaatataaacgaggaactcattgttgca
gggtcccagtcagggtccattcgcgtttgggacctggaagctgccaaaattcttcgtaca
ttatttggtcacaaagcgaacatttgcagccttgatttccatcctttcggaagttttgta
gcatctggctctttggacacaaacattaagctctgggatgtaagaagaaaaggctgtgtc
ttcaggtataagggtcacactcaagcagttagatgtctccgatttagtcctgatggcaaa
tggctagcctctgctgctgatgatcatactgtaaagctgtgggatctggctgctgggaag
atgatgtttgagtttacaggacatgctggcccagtgaacgttgtagaattccatccaaat
gaataccttttggcttctggcagctctgacaggactgttcgattctgggacttggagaag
tttcaagttgtgagctgcattgaagaagaggctactcccgtcaggtgtgttcttttcaac
ccagatggctgctgtttgtatagtggtttccaggattcactgcgtgtatatgggtgggag
cctgagcgctgttttgatgtggtcttggtgaactggggaaaagtagctgatttatctatc
tgcaacaaccagctgataggagtttcctatgcgcaaagcacagtttcttccttcgttgtg
gatctcagcagagtcacaaagtcaggttcggttcctcatgggctgatcagggatgacaag
cctctcatgcagcccacccccacagggtcctccctccgccgtatctatgacaggccctca
actagctgcagcaagccacaaagagtgaagcacaactcagaaagcgagaggcgcagtccc
agcagtgaagatgaccgggatgagaaggaatcaaaggctgagatccagaacccagaggat
tacaaagagatcttccagcccaagaatgccatctctcgaactcctccacgaaacagtgaa
ccttttccagccccccctgaagatgagcctgtaactgcaaaggaagcagtgaagcctaac
caagctgtggaagtccagaccccgttgccaaagcaggaattccctgatcaaattcagagg
ccaccaattgcctcctcaactcctgtgaccagagcagagctgtcagtgattcctgcagcc
aggaatgaacccattggcctgaaagccactgactttctaccagctgtgaaaaaccaaagc
cagactgagcttgtggatgaggaagccgtgtcccaaatcaggaaaggccatgagaccatg
tgtgtggtgctcaccagccgccacaagaatctggacactgtgcgggctgtatggagcacc
ggtgacatcaagaactctgtggactctgctgtagcaatcaatgatctgtctgttgttgtg
gacctcttgaacattgtcaaccaaaaagcgtctctctggaagttagatctgtgcactgta
gtcctgcctcagatagaaaaactactccaaagtaaatatgaaagttacgttcagactggc
tgcacctccttgaaactcattctccagagattcctgccactgatcacagacatgcttgct
gcaccaccttcggttggagtagacatcaccagagaggaaaggctccataaatgcaagctg
tgctacaagcagctgaagaacatcagcaacattgtcaagaacaagtcagggctcagtggc
cgccatggtagtgccttccgggaactgcatctcctcatggctgtcctggagtga
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