Aythya fuligula (tufted duck): 116494090
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Entry
116494090 CDS
T07966
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aful04040
]
116494090 (PKD1L2)
Ion channels [BR:
aful04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116494090 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Lectin_C
Gal_Lectin
Ion_trans
GPS
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
116494090
NCBI-ProteinID:
XP_032051683
UniProt:
A0A6J3DQT8
LinkDB
All DBs
Position
12:complement(16450620..16488983)
Genome browser
AA seq
2423 aa
AA seq
DB search
MTTHAFEEGSKKSGDVISNTSAMQGTELKMWLGITVLIFLAVCLAVEETPAEEGIPCSKY
QLAFNHSCYEFVRLQRSFRSAQRWCERGGGHLVFIENEETQEFLQKHIVEDQEWWIGLIS
NSLLNETTDGSMIWLDTSDISYGNWYEDQPSSFSSTCGYILKNAKYRWGVTENCSQEFDF
ICEFESGQSIACDSSNATVQCGSGEVIQIGETFYGRKTPHYCVLETPLQYDTDEDCSWIS
VKDEVAGQCHGLQACQVAADGAFFGDPCPASGSYLSVQYHCKEGLQLVVTDRCFIFENIT
VTLNWLLSPYTGNLSCVISTGDGHTVDPYYPLTLVSNVTYRYSSPGEFTVFVECTTSEWH
VTAQRRVTVQDKLDELSLTGCYSQYESGNGSPCRTLYGEVLWIQVELNGGNGVTYVVLAG
NVTLAESSAKEGIVPHNLTLDSAAQELLGPGMHRLEIRASSNTTASEISGSIAVHLIEPV
SGLQAVLASHAVQLGENLEINVSVPHGAPDKLKFEVVGSNETHSHEENSPAGEPRTYFIP
MHSEGTFLVKVVATNAFSNMSLDIGLINVLANTSHKEDRVFNYNPSRQTSAMGDAASQGG
ITLYKSADHKRKNKIYIKPSRHVDPFTTVTLGWPDNSTNSSFLWSCGACWPEWNECMQHQ
IILTNQREVQIPPSCLPPPKSAVTVKVTVQNRGNEEKQDEQCLYVTAKQELQLEIRCEAN
CKPVNASEEVVLSVSGQKDSQAISYNWYLDNTFQDKSAPLPPACSLTGFRQDSLNLLQSN
ASMLIMNSSFLQTHGEAFQIKVTAVTQRGYGEDTYLVSTVPPPQVPSCTVSPREGSVLTA
FTVSCSPPCSVDSCQSQQLTYCFYLNSNSLLHCGPDPELFPVYLPLGEEENNFILHVTIT
ISNNFGDTVQTNASVKVGHTDMIDGNLTLQAIVSEKANNILKDGNNSMSLFQLFKSVTSV
LNHETQEENFNISLQTDTRKEMSEVLKEITHRSEELSASAQVEASNTLKDVSASLLTVNT
EDSRDDQKLKDAATYLFNAVSNVLQASVHTRAVNTSVPEAEQLVLGRVYYNDMVDLNIKM
VSFAVNPFFSSDSSFDISGTVGGLSLTGLDGLIIPVSNLKENIEIMLPRHSATQEDRILL
NLGNFSTFQVNVTSENTSVVIYLECEEDVPLILYSGYGYRPNETNYDLKNHLFCKKTTGG
ETNTWVLSPAELIFGEGTYYFTVLQDMGVDSTAHDKLTIAVTCFASRCVFWDEHQGNWNS
YGCQVGPKTSPRSTQCLCNHLTFFGSSFFVIPNAIDVSKTTQLFGTFVDNPVVVTTVGCI
FLIYVLVVVWARRKDIQDDAKVKITVLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTL
YGLEGESEPHHLTDPDTPVFERGGVDVFLLCTLFPLGELQSIRLWHDNSGDNPSWYVNRV
VVQDLAWDQKWYFLCNSWLAIDIGDCVLDKVFPVATEQDMKQFSNLFFMKTSKGFQDGHI
WYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEV
MIGFESSLLMFPINLLIVQIFRNVRSRPATPGREKKPGKNGRVSPSLPPTPQLTQAISLT
PEAVMKDIRRIANSLFKALKTPSLTSVSDLGKSTNINTLLALVEDIICHQNRAGQEFYDE
SKKKDDPIIVTLGAMDIPEKARSPTPEKGTCERLKHNDYNRCLYMQLQHVEMELELLGPH
KFQMPQSYTQAVRQVQHMKNLLENQICPSVWSLTPSSSGDGKKSSSSKGLPWWFVFIAWF
LVAATSGVSGFFTMLYGLHYGKENSIKWLISMAISFFESLFITQPLKVLGFAAFFALVLK
KVEHEDEENMAIDGPLSAPGDSNPLLGARRDSRSNIYRPPPAADVEKMKISCMKEQKAFA
LIREILAYVGFLWMLLLVAYGQRDPNSYYLNKHIESSFTDGFHDVYSYQDFFTWAKTTLL
KNLYGSYTGFITDGNSKLVGSARIRQVRVKGDTCPLSPKLQSVIRECHAPYSLQTEDTSD
YGEHWNTSVSANSSDLSSAWQYQSQSELRGQPVWGKLAVYRGGGYVIHLGTDPDNASRIL
QYLFNNVWLDTFTRAVFVEFTVYNANVNLFCIISLMFETNALGAFFTSAELQSVRLYPYT
NSLHIFVVAAEVIYFLFIVYYMIVQGKLMKTLKWRYFHSKWNLLEMAIILISWSALSVFV
KRTILGTRDISYYQEHKEDCVSFNETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNM
ITSTLRRAWGDISGFITVIAIMFLAYSIATNLIFGWKLYSYKTLFDSAETMVSLQLGIFN
YEEILDYSPILGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMVM
KLFSFFGIKCKKEEKPASNDQLK
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcacgcttttgaagaaggcagcaaaaagagtggtgatgtgataagcaacacc
agtgccatgcagggcactgagctgaaaatgtggcttgggatcacagttctaatttttctt
gctgtatgtttggctgtggaggagacaccagctgaggaaggaatcccttgctcaaagtat
cagctagctttcaaccactcatgctatgagtttgtgagactccagcgatccttcagaagt
gcccagagatggtgtgagagaggaggggggcaccttgtctttattgaaaacgaggaaact
caagagttcttgcagaagcatattgtcgaggatcaggaatggtggataggactgatctca
aactccttgctgaatgaaactactgacgggtcaatgatttggctggacacctcagatata
agctacggtaactggtacgaggatcagccatcttctttctcatccacatgtgggtacatc
ctaaagaatgccaagtatcggtggggtgtgactgaaaattgcagccaggagtttgacttc
atttgtgagtttgaatctggccaaagcattgcttgtgatagttccaatgccactgtacag
tgtgggtcaggagaagttatccaaattggagagaccttctatggacggaagacccctcac
tactgtgtattggaaacccctctccaatatgatacagatgaagactgtagctggatcagt
gtcaaagatgaagtagcaggacagtgtcacggtcttcaggcctgccaggtggcagcagat
ggagctttctttggagacccttgcccagcttcaggaagctatttgtctgttcagtaccac
tgcaaggaaggtctgcagctggttgtaacagatagatgctttatctttgaaaacatcaca
gtcactttgaactggctgctctccccatacactggcaacctttcctgtgtcatcagcact
ggagatggccacacggttgatccttactaccctctaacactggtcagcaatgtcacatac
agatattcatctcctggggagttcacagttttcgtggagtgcactaccagcgagtggcat
gtgacagcacagaggcgggtgactgttcaagacaagctggatgaactaagccttaccggg
tgctacagccagtacgaatctgggaacggctctccctgccgaacactctatggggaggtg
ttatggatccaagttgaactcaacggaggtaacggagtgacctacgttgtactagcaggt
aacgtgacgctcgctgaatccagtgcaaaggaaggaatcgtcccgcacaatctgacactt
gacagtgctgctcaggagctgctgggccctgggatgcatcggctggaaatccgagcatcc
agcaacaccactgcatcagagatctctgggagcattgccgttcacttaattgagccagtc
tctggtcttcaggctgtgttagcttctcatgctgtgcagctgggggagaatctggagata
aacgtctctgttcctcatggtgccccagataagctgaagtttgaggtggttggatctaac
gaaactcactctcatgaggaaaacagccctgcaggggaacctcgaacatacttcattccc
atgcactctgaaggtactttcctagtgaaagtggtggccacgaatgccttctcaaacatg
agtctggatatcgggctcatcaatgtgctggcaaacacttcgcataaagaagatagagtt
tttaactataaccctagcagacagacgtctgctatgggagacgctgcttcacaaggaggc
atcacgctttacaaatcagctgatcacaaaagaaaaaacaaaatatatattaaaccaagt
cgccatgtggatcctttcacaaccgttactcttggctggccagataacagcactaattct
agtttcctctggtcctgcggagcttgctggcctgagtggaatgaatgcatgcagcaccag
ataatcttaaccaaccaacgagaggtgcagatcccaccttcctgccttcctcctccgaag
tcagcagtgactgtgaaggttacagtgcaaaaccgtgggaatgaagagaaacaggatgag
caatgtctctatgtgactgcaaaacaagaactacagctagaaatcaggtgtgaggcaaac
tgcaagccagtgaacgctagcgaggaagttgttttgagtgtctctggacagaaggactcc
caggccatttcgtataactggtacttggataacacattccaagacaagtctgcgcccctc
cctccagcctgtagcctgactggtttccggcaggactctttgaatttgcttcaaagcaac
gcatccatgttgataatgaacagctccttcttgcagacacacggagaagcttttcagatt
aaagtaacagcagtgactcagcgtggctacggggaggacacctacctcgtgagcacagtg
cctccgccccaggtccccagctgcactgtgtctcccagggagggatccgtgctcactgct
ttcacagtctcctgcagccctccatgctcagtggattcatgccaatcccagcagctcaca
tactgcttctacctgaactcaaattctctcttgcactgtggcccagatcctgagctcttc
ccagtttatcttccactcggagaagaggaaaataatttcattttacacgtgacaattacc
attagcaacaactttggcgatacagttcaaactaatgcttcagtgaaggttggacacaca
gatatgatcgatgggaacctgaccctacaggccattgtatctgagaaggcaaacaacatc
ctaaaagatgggaacaacagcatgagtcttttccagctgtttaagtcagtaacctcagtc
cttaatcacgagacccaagaggaaaactttaacatatctttacagacggacacacgaaaa
gagatgtcagaagtgttgaaagaaatcactcacaggagtgaggagctgtctgcctctgcg
caggtggaagctagcaacacactaaaagatgtaagtgcttccttgctcactgtaaacaca
gaggacagcagagatgatcagaagctaaaggatgcagccacctacctatttaatgcagtg
agcaatgtcctacaagcttccgtacacaccagagctgtgaacacttcagtgccagaggca
gaacagttggtattgggtagggtttattacaacgacatggtggacttgaatatcaaaatg
gtgagctttgccgtgaatccctttttctccagcgactccagttttgacatcagtggaaca
gtgggaggtttaagccttactggtctggatggcttgatcataccagtcagcaatctcaaa
gaaaacattgagatcatgttaccaaggcattcagcaactcaggaagataggattctgttg
aatctgggcaattttagcactttccaagtcaacgtcacctcagaaaacacatctgtagtg
atttacctggaatgtgaagaagacgttccattaatactttactcagggtatggttatcgc
cctaatgaaactaattatgacctgaaaaatcatctgttctgtaagaaaactactggaggt
gagacaaacacctgggttcttagcccagcagaactcatttttggagagggaacttactac
ttcacggttttacaagatatgggagtggattccacagcccatgacaagttaacgatagct
gttacttgcttcgcatcccgctgtgtgttttgggatgagcaccaggggaactggaacagc
tatggatgtcaggtaggaccaaaaacaagtcctagaagcacacagtgcctctgcaaccat
ctgaccttttttgggagctccttctttgtcatacccaatgccattgatgttagcaaaacc
acacagctatttggtacctttgtggacaaccctgtggtggtgaccactgtaggatgcatc
tttctgatatatgtgcttgtagttgtttgggctcgaaggaaagacatccaggatgatgcc
aaagtgaaaatcacagtactggaagacaatgacccctttgctcagtaccgttatcttgtg
acagttttcacaggacaccgccgtggggcagccacaacctccaaggtgactctcaccctc
tatggactcgaaggagagagtgagccacaccatctgactgatcctgatacaccagtcttt
gaacgtggaggagtggatgttttcctgctctgtacccttttccctcttggggaattgcag
agtattcgactgtggcatgataattcaggggacaatccatcctggtatgtgaatcgagta
gtggtccaggacctcgcatgggaccagaagtggtacttcctctgtaactcctggctagcc
attgatattggagactgcgtcctagataaagtgttcccagtagctacagaacaggacatg
aagcagttcagcaatctgtttttcatgaagacctccaaaggtttccaggatgggcacatc
tggtactcagttttcagccgctccccacgaagctccttcacacgagcccagcgcgtgtcg
tgctgcttctcgctgctgctctgcaccatgctgaccagcatcatgttctggggggtgcca
aaggatccagccgagcagaaaatggatctggggaagattgagttcacgtggcaggaggtg
atgattggctttgagagctccctcctcatgttccccatcaacctgctcatcgtgcagatc
ttcaggaacgtacgatcccggccagccacgccgggcagagagaagaagccgggaaagaac
ggccgggtgtctcccagccttcctcccaccccacagctcacccaggccatctcgctcact
ccagaggctgtgatgaaggacataagaagaattgccaactcactctttaaagccctgaag
actccatcactcacttcagtatcagatcttggaaaatcaactaatatcaacacacttttg
gcattggttgaggacatcatctgccaccagaacagagctggccaagagttttacgatgag
agcaaaaagaaggatgaccccatcattgtcacactaggtgctatggatataccagaaaag
gcaagaagcccgactccagagaagggaacgtgtgaacgactgaaacacaatgattacaac
cgttgcttgtacatgcaactccagcatgtagagatggagttggaattactggggccccac
aaatttcagatgcctcagagttatacacaagctgttcgtcaggttcagcacatgaagaac
ctcctggagaaccagatttgcccatcagtgtggtctcttactccaagctcctctggtgat
ggaaagaaaagttcctcttccaaagggctgccctggtggtttgtgttcattgcctggttc
cttgtggcagccactagtggcgtgtctgggttctttaccatgctctatgggctgcattat
gggaaggagaactccatcaagtggctgatctccatggctatctccttctttgaaagtctt
ttcatcacacagcctttaaaggtgctgggatttgctgccttctttgctctggttctgaag
aaggtggaacacgaggatgaagaaaacatggccattgatgggcctttgtctgcaccaggt
gactcaaatcctctcctcggagcccgccgggacagcagaagcaatatttatcggccacct
cctgcagctgatgttgagaaaatgaaaatcagctgcatgaaggagcagaaagcatttgcc
ctcatcagagaaatcctggcctatgtggggtttttatggatgctcttactggttgcctat
gggcagagagatcccaactcctactacctaaacaagcacatcgagagcagctttacagac
ggattccacgatgtctacagttaccaggattttttcacatgggcaaaaaccaccttactc
aaaaatctttatggatcatatacaggattcatcacagacggcaactccaagctggtgggt
agtgctcgaatccgccaagtacgagtgaaaggagacacctgccctctttctcccaaactc
cagagtgtgattcgggaatgccacgctccgtactccctacagacagaagacacatcggac
tacggggagcactggaacacttcggtctctgctaactcctctgatttgagctcagcatgg
cagtaccagagtcagtctgagctgagagggcagcccgtctggggcaaacttgctgtctac
aggggagggggatacgtgattcacctgggaaccgatcctgacaatgcctccagaattctc
cagtaccttttcaacaatgtctggctggacaccttcacaagagcagtgtttgttgaattt
acagtctacaatgccaatgtgaacctgttctgcattataagcctgatgtttgaaaccaat
gctttaggggccttcttcacaagtgcagagctgcaaagtgtccgtctctacccatacacc
aacagcctccacatctttgttgttgcagcagaagtcatttatttcctctttattgtgtac
tacatgatagtacagggaaaattgatgaagactctgaaatggagatacttccacagcaag
tggaatctcctggagatggccattatattgattagctggagtgccctgtcagtgtttgtg
aagcggacaatccttgggacccgagacatcagctactaccaggagcacaaagaggactgc
gtaagctttaatgaaacagcgagagctgatgcagttcttggctacctgattgctttccta
gtgctcctctccacagtgaaactgtggcatctgctgcggctcaaccctaaactaaacatg
atcacttcgactctacggagggcttggggtgacatctctggattcatcactgttatcgca
atcatgttcctcgcctattccatcgctacaaacctgatatttggctggaagctctactct
tacaaaactctctttgattcagcagagaccatggtcagtcttcagctgggaatcttcaac
tatgaggagatcttggactacagtccaattttaggctccttcttgatcggatcctgcatc
attttcatgacgtttgtggtgctgaatctcttcatttcagtgattctggttgctttcagt
gaggagcagaagcactaccaggcttcagaagaggaggagatcgtggatctaatggtaatg
aaacttttcagtttcttcgggattaaatgcaagaaggaggaaaagcctgccagcaatgat
caactgaagtaa
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integrated database retrieval system
