Aythya fuligula (tufted duck): 116494142
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Entry
116494142 CDS
T07966
Symbol
TDRD12
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116494142 (TDRD12)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
116494142 (TDRD12)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116494142 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
116494142
NCBI-ProteinID:
XP_032051747
UniProt:
A0A6J3DQB9
LinkDB
All DBs
Position
12:complement(55470..82618)
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AA seq
1190 aa
AA seq
DB search
MEVFVLQIEDPSCFWVTMKGCGPYIVDEIEYKNLNAEMNQFYDKSCENVDEVKPVTLEKG
QMCVVFSEELKCWCRAVIKSIMYCAGHYQTECFLVDYAKYTIVKTKDVRVAMKAFMQIPY
RAKKCRLHCTKPVTLRVNFCEDTAQIVPAQRWDNAATQYFQSLLKATTQIKAKLCAVEDN
TFDVILYVTIKDEKVCINDDLVSKNFARFVETEEDTGSPAKDQENQTSLNVEYFPVKIID
PTRAFRPVLSEEKVPMNLETGHSVSISSPEKTYQRSSTDVNEGTKSSSHSVSEEGNFVFL
SNKIEPSSILEKAPLYDDLKKELTREKFLGPTFTESYCWPPVARGCDVVAISHQGNDPFL
YIPPVLTFLQLGSCYKALPNRNGPLALILCPGWKKAQLVFELLKTYSRCSRQLHPMLIIL
GQNKEEAKRVKIQGCDVIVTTPYSFLRLYEHNCLLFCRLCHLVFDEIEVLFSEATEQVFT
ILDCYKKTIITEEWEYLPHQIIAVGTHWNKHMARLIKEFMNDPYIVITAMEEASIYGNVH
QVVQHCVSSEKTAILLKMLDFTPNHLQKVLVFTDSLDEVEMVHQALKSNSIFALKIHKEK
EFNFTYVLEHWTKSYASGNHVVLVLTDDCMQFLGITDASCVIHFSFPSSPRIFGQRLYNM
SDNFHNVIEESSVDQEHTKARSVVLLTENNMCHALGILRYLKRAKAEIPLELHDFTARVL
EAEEEKKFARPLCTYLKAFGICKNRTVCPDRHQINLQIDNAPEYARXNYTTSGRVTILPL
HIVNATNYFGRIVDKQQDQYTTLAEEISEYFKETSNKIPIKKAEKLALYGLCEETLFHRV
QVVETPPKEENLFFNIKIKYIDEGRTRQVQSSQLLHLPARFQQLPPQAVEFIVCRVKPVD
NEIEWNPKVTHYIHHKIKGKPHEAKIVLALGNTVWIDPMVRVTRLSDLKMYVNEYSVRSE
ILSTGLGTDNPEHVTQLQKLCVLNHTNDLEPLSIKEDTDHSENMSDPQNMSIQANSTENC
KSSKMTMGNHLCDGVAQNKEAEDSTLHQHKCFYPEIKWFQNEVTVTVKVKIAGIADYKCD
FSKEKVIFSACSGDKLYLADMELHQYILTEKSSCVIKDKEAAIILTKEKKGPWCKLLKNK
NPHVSFDFEHWEDFEDKGPFPAGTKKLHCTSAVTEDLVESSDDSSVESDE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctttgtactacagattgaagatccaagctgcttttgggttactatgaaagga
tgtgggccgtacatagttgatgaaatagagtataaaaacttgaatgcagaaatgaatcag
ttctatgacaaatcttgtgaaaatgtggacgaagtaaagccagtaacattagaaaaaggc
cagatgtgtgtggttttcagtgaagaactgaaatgctggtgtagagcagttattaaatca
atcatgtactgtgcaggtcattatcaaacagaatgctttcttgtggattatgccaaatac
actattgttaaaacaaaggatgttcgagttgcaatgaaagcatttatgcaaatcccatac
agagcaaaaaaatgtagattgcattgtacaaagccagtgacgttgcgtgtcaacttctgt
gaagatacagcacaaatagtgccagcccaaagatgggataatgctgctactcagtatttt
caaagtcttctgaaagcaactacacaaatcaaagccaagttatgtgctgtagaggataat
acatttgatgttattctttatgtgacaataaaagatgaaaaggtatgcattaatgatgat
cttgtctcaaagaactttgctcgctttgtggaaactgaagaggatactggaagtcctgca
aaagatcaagagaaccagacgtcattaaatgttgaatattttccagtaaaaatcattgat
cctacacgtgcttttaggccagttctgtctgaggagaaagtaccaatgaatcttgaaaca
ggtcatagtgtttctatttcttctcctgaaaagacgtaccaaaggtcaagcacagatgta
aatgaaggtaccaaatctagttctcacagtgttagtgaagaagggaactttgtctttctt
agcaacaaaattgagccatcttcaattctggaaaaagcaccactttatgatgatctgaaa
aaggaacttactcgggaaaaattcttaggccctaccttcacagaatcttactgttggcca
ccagttgctcgaggatgtgatgtagttgccatctcacatcaaggaaatgaccctttctta
tatattccaccagttcttacgttcttgcaattgggaagttgctacaaagccttgccaaac
agaaatggaccactagcacttattttatgtcctggctggaagaaggcacaacttgttttt
gagttgttgaaaacttacagcagatgttccagacagcttcatccaatgttgataatactt
gggcagaataaggaagaagctaaaagagtgaaaatccaaggatgtgatgttattgtgacc
acaccatacagcttcctgagactgtatgaacataactgcttattgttttgtagactttgc
catcttgtttttgatgagattgaggtactgttttctgaagctactgaacaggtttttact
atattagattgctacaagaagaccattattactgaagaatgggaatatttaccacatcaa
attattgctgttggaactcattggaataaacatatggcacgtttaataaaggaattcatg
aacgatccttacattgtgataacagctatggaagaagcttctatttacggaaatgtacat
caggttgtgcagcattgtgtgagcagtgagaaaaccgctatattactcaaaatgttggat
tttacccctaatcatcttcagaaggtgttggttttcacagattcactagatgaagtagaa
atggtacatcaggcactgaagagcaattcaatatttgccttgaaaatacataaagaaaag
gagtttaatttcacgtatgtcctagagcactggacaaaaagctatgcttctggtaatcat
gttgtgttagttttaacagatgactgcatgcagtttttgggaattacagatgcatcttgc
gtgatacatttcagttttccttcttctccaagaatctttggtcaacgtctatacaacatg
tctgacaacttccataatgtgatagaggaatcatctgtagatcaggaacatacaaaggca
aggtcagtcgtactgctaacagaaaacaacatgtgtcatgctcttgggatcctgcgctat
ttgaagcgtgctaaagctgaaattcccctggaactgcatgattttacagccagggtgcta
gaagctgaagaagaaaagaagtttgcaaggccactgtgcacctatcttaaagcatttgga
atttgcaagaatagaacagtgtgtccagaccgtcatcaaattaatttgcaaatagacaat
gctccagaatatgccagataaaattacacaacgtctggacgtgtgacaatactgcctctc
cacattgtaaatgcaacaaactacttcggtcgtatagtagataaacaacaggaccaatat
actactcttgctgaagaaatcagtgaatattttaaggagactagtaataaaattcctatt
aaaaaggcagagaagctagctctgtatggattatgtgaggaaacactttttcacagagtt
caggtggtagagactcctccaaaagaagaaaacttattctttaatatcaaaatcaaatac
atagatgaaggcagaacacgtcaagttcagagctctcagcttcttcacttacctgcaaga
tttcagcagctgccacctcaggctgtggaatttatagtttgtagagtgaaacccgttgat
aatgaaattgaatggaacccaaaggtaacccattatattcatcacaaaattaaaggaaaa
ccacatgaagcaaaaatagtacttgccctaggaaatacagtttggattgacccaatggtc
cgggttaccaggctttcggatttgaagatgtatgtcaatgaatacagtgtgcgatctgag
attctgtctacaggtctgggaactgacaatccagaacacgtaacacaactccagaagtta
tgtgtattaaatcacacgaatgacttggagcctttaagcataaaggaggatacagaccat
tcagagaacatgtctgatcctcagaacatgtccatacaagcaaattctactgaaaactgt
aaatcttctaaaatgactatggggaatcatctatgtgatggtgtagctcaaaataaggaa
gcagaagactccaccctgcatcagcacaaatgcttttatccagaaataaaatggtttcaa
aatgaagtgactgttacagtgaaggtaaaaatagcaggtattgctgactataaatgtgac
ttctctaaagagaaagtaattttcagtgcttgttcaggagacaaactttatttggctgac
atggagctacatcagtacatacttacagaaaagtcatcgtgtgtgattaaggataaagag
gctgctattatccttacaaaagagaaaaaaggaccatggtgcaagttactaaagaacaag
aatcctcatgtgtcttttgatttcgaacactgggaagattttgaagacaagggtcctttt
ccagctggtactaaaaagctgcattgcacttctgcagtaaccgaagatctggtcgagtct
tcagatgacagtagtgtagaaagcgatgagtaa
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integrated database retrieval system
