Aythya fuligula (tufted duck): 116494204
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Entry
116494204 CDS
T07966
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116494204 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aful04131
]
116494204 (VPS35)
Membrane trafficking [BR:
aful04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116494204 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
116494204
NCBI-ProteinID:
XP_032051854
UniProt:
A0A6J3DMN0
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Position
12:complement(2447885..2474149)
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AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNKLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctcctcaggatgaacaggaaaaactcctggatgaagcaatt
caggctgttaaggtgcagtctttccaaatgaagagatgcttggacaaaaacaagctcatg
gatgctttgaaacatgcttccaacaagcttggtgagctgcggacttctatgctatctcca
aagagctattatgagctctacatggcaatttctgatgagctacactacttggaagtctac
ctgacggatgaatttgccaaaggaagaaaagtggcagacctttatgagttagtacagtat
gctggaaatattattccaagactgtatctcctgataacagtaggtgttgtctatgtcaag
tcgtttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtggagta
cagcatcctcttagaggcctctttcttcggaactatctcctgcagtgtaccaggaatatt
ttaccagatgaaggcgagcaaacagatgaagaaaccactggagacatcagtgattccatg
gactttgtgctcctgaattttgctgagatgaacaaactttgggtgcgaatgcaacaccag
ggccatagtcgtgatagagagaagagggagcgggaaaggcaggaactgcgaatcttggta
ggaacaaaccttgttcgcctcagtcagctggaaggtgttaatgtggagcgatataagcag
atcgttctgcctggaatattggagcaggttgtaaattgtagagatgctttagctcaggag
tacctcatggagtgtataatacaggttttcccagatgaatttcatctccaaaccctgaat
ccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataataatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggccctggtatcccagca
gatatcaaactgtttgacatcttttcacagcaggttgctactgtgatacagtctcgccaa
gacatgccctcagaggatgtggtatccttgcaagtttctctcattaacctggctatgaaa
tgctacccggaccgtgttgactatgttgacaaggtgttggagacaactgtggaaatattc
aataaacttaatctggaacatattgcaacaagtagtgctgtttcaaaggagctgactaga
cttctgaaaatccccgtcgatacttacaacaatatcttgacagttctgaaactgaaacat
ttccacccactctttgaatactttgattatgagtccaggaagagcatgagttgctatgtg
cttagcaatgtattggattataacacagaaattgtatcccaagaacaggttgatgctatc
atgaatttggtatccacgctgatccaggatcaaccagatcagcctgctgaagatcctgac
cctgaggactttgctgatgagcagagtcttgtgggaagatttattcatcttttacgatca
gatgaccctgaccaacagtatctgatcttaaacactgctcggaaacactttggtgcaggt
gggaatcaacgtattcgttttacgctgccaccattggtttttgcagcataccagcttgct
tttcgctacaaggagaattccaaagtggatgacaaatgggaaaagaagtgccagaagatc
ttctcatttgctcatcagaccataagtgctttgatcaaagcagagctggcagagctgcct
ctccgtctcttcctacaaggagcgctagctgcaggagagattggctttgagaatcatgaa
actgtggcctatgaattcatgtcccaggccttctctctatatgaagatgaaattagtgat
tcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatgaagtgc
tttagtgaagagaaccatgagcctttgaggactcagtgtgcattggcagcttctaagctc
cttaagaaaccagaccagtgtcgggctgtgagcacttgtgcccatctgttctggtctggc
cgaaacactgacaagaatggagaggagctgcatggaggaaagagagtgatggaatgtctg
aagaaggctttaaagatagcaaatcagtgcatggacccttctctgcaagtccaactgttc
atagaaattctgaatagatacatctacttttacgaaaaggaaaatgaggcagtgacaatt
caggttttgaatcagctcatacagaagataagagaagatctcccgaatcttgaatctact
gaagaaacagaacaaatcaacaaacactttcacaacacactggagcacttgcgtctgagg
agggaatcaccagaatctgaggggccaatttatgaaggtcttgttctttaa
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