Aythya fuligula (tufted duck): 116494294
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Entry
116494294 CDS
T07966
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116494294 (ZC3H12B)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
116494294 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
mRNA_triPase
Motif
Other DBs
NCBI-GeneID:
116494294
NCBI-ProteinID:
XP_032051988
UniProt:
A0A6J3DMZ0
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Position
13:complement(21181916..21212761)
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AA seq
837 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSSCSNIQWRE
KEVSTKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTSLDKEYQAKMDFALKLGYAGDQ
IQAVLNKLGADALINDVLAELVRLGNKSESEGQNSASSTTSTLVPRGPCPKEIASPELSL
EDEVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRK
EQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSND
NYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQ
PCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSS
KGEISSEVKRIAPKRQSDPSIRSVAVEPEEKLTVARKSEASSVPSLVSALSVPTLPPPKS
HAAGALNTRSASSPVPGSSQFTHQKSSLEHMSSVQYPPILVTNSHGTSVSYTDQYPKYES
LGDHGYYSLLSDFSNLSVSSMHNTDYYGADTDQGMYSRNSSPCPDNCLSHTSNDSYSSYN
DLYLGVADASPEDNVKIHRLPSQNRLQTFSHGYHEALNRVQSYGTEEPKQSLRKQSVSHL
GLHAQHSVVGARSSCPGEYPVPQNIHPSTAQPSRALVMTRMDSISDSRLYESNPARQRRP
PLCREQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGIC
GEPREPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtccatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaacgtggaacaagatgctggggaatgcagtgctgaatccgaggaatggacgagttca
gaaagtgaacctgagcaaccatacttcagaagcagctgtagcaatattcagtggagagaa
aaggaggtttccactaaaccacatcggccactctgtcgctccccttgtttggatcgccca
agtttttcacagagcagtataacacaagacctgaagctagatgaatgcaaaacgagtttg
gacaaggaataccaagctaaaatggattttgctttaaaacttgggtatgcaggagatcag
atccaggctgtactgaataaactgggagcagatgcgctcatcaatgatgttctggctgaa
cttgtgagacttggcaacaaaagtgaatcagaaggacagaacagtgccagcagtaccact
agtactctggtgccaagaggcccttgtccaaaggaaatagcaagccctgaattgtcactt
gaagatgaagttgtggataacagtgataacttgaggccaatcgtcattgatggaagcaat
gtggctatgagccatggaaataaagaaggattttcctgtcggggaattcaactagctgtt
gattggtttctggaaaaaggacataaagatatcactgtgtttgtacctgcatggagaaaa
gaacagtctcgacctgatgcaccaattacagatcaagaaatcttacgtaaattggagaaa
gaaaaaattcttgttttcaccccatctcgaagagttcaaggaagaagagtagtttgctat
gatgaccgattcatagtaaaacttgcttttgactcagatggcatcattgtatcaaatgac
aactatagggatcttcagaacgaaaaaccagaatggaagaagttcatagaggagcgactg
ctaatgtattcttttgtgaatgacaaatttatgcctcctgatgatcctttaggacgccat
ggtccaagccttgaaaatttcttaaggaaaaggccagttattcctgaacataaaaaacaa
ccgtgtccttacggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaa
cgggcaaaccaacctcaaaggtcagtagcggatgagcttcggataagtgccaaattatct
gctgtgaaaactatgagtgagggagccttggccaaatgtggcacagggccatccagctcc
aaaggagagatcagttctgaagtgaaacgcattgcccccaaacgccagtcagatccaagc
attagatcagtagctgtggagcctgaggaaaagttaacagtagcccgcaagtccgaggcc
agctctgtcccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagc
catgcagctggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacag
ttcacgcatcagaaatcctcactggaacacatgtccagtgtgcaatatcctcctatacta
gtcaccaatagccatggcacctcagttagttacactgaccagtatcccaaatacgaatcg
ttaggggaccatggctattactccttactcagtgatttctccaacttgagcgtaagtagt
atgcataacacagattattacggggctgatacggaccaggggatgtattctagaaactca
agcccctgtcctgacaattgcttaagccatacaagtaatgattcttattcctcttacaat
gacttgtatctgggtgtagcagatgccagtccagaagacaatgtgaagatccatagactg
ccatcgcaaaatcgtcttcagactttttcccatggttaccatgaagccttaaatagagtt
cagagttacggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccactta
ggcctgcatgcccagcattcagttgttggagcacggtccagttgtccaggagaataccct
gtgcctcaaaatattcatccatcaactgcacaaccaagccgtgccttggtcatgacaaga
atggacagcatttctgactcacggctttatgaaagtaatcctgcacggcagagaagacca
cctctctgtcgagaacagcatgctagctgggatccgttaccatgtgcatcagactcttac
acttaccactcgtatccattgagtaacaacctcatgcagccatgttatgaacctgtaatg
gtaagaagcatgcctgagaagatggagcaactctggaggaatccatggattgggatatgt
ggtgagccacgggaaccacatatcattccagaacatcagtatcaaacatacaagaacctc
tgcaatatatttccaccaagcattgtcctttctgtgatggaaaagaatccccacatgaca
gatgcacaacagctggcagctatgattgttgccaaattaagaacagggcgttaa
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