Aythya fuligula (tufted duck): 116494458
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Entry
116494458 CDS
T07966
Name
(RefSeq) transcription factor SOX-3-like isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aful03000
]
116494458
Transcription factors [BR:
aful03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116494458
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116494458
NCBI-ProteinID:
XP_032052260
UniProt:
A0A6J3DQK0
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All DBs
Position
13:10616872..10618352
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AA seq
305 aa
AA seq
DB search
MYSMLEAEIKTPQPTPGSGGGGGASGGAGAGSDQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDK
YSLPGNLLAPGGGNTVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQLGYSQHPGMNSPQL
QQMHRYDMTGLQYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSLGSMGSVVKSEPSS
PPPAITSHSQRACLGDLRDMISMYLPPGGDATDPSALQGSRLHSVHQHYQSAGTAVNGTV
PLTHI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaggctgagatcaagacgccgcagcccaccccgggcagcggcggc
ggcggcggggccagcggtggagccggggctggctcggaccaggaccgggtgaagcgcccc
atgaacgccttcatggtgtggtcgcggggccagcggcggaagatggcccaggagaacccc
aagatgcacaactcggagatcagcaagcgcctcggggccgactggaagctgctaagtgac
gccgagaagcgacccttcatcgacgaggccaagcggctgcgggctgtgcacatgaaggag
tatccggattacaaataccggccccgacggaagaccaagaccttgctgaagaaggacaaa
tactcgctgcccggcaacctgctggcccccggggggggcaacacggtgagcagccccgtc
ggggtgggccagaggattgatacgtatgcccacatgaacggctggaccaacggggcttat
tccctgatgcaagaccagctgggctacagccagcacccgggcatgaacagcccgcagctg
cagcagatgcaccgctacgacatgacgggcctgcagtacagccccatgatgtccacggcg
cagacctacatgaacgccgcctccacctacagcatgtcccccgccgcctacggccagcag
ccctccacggccatgagcctgggctccatgggctccgtggtgaaatccgagcccagctcg
ccgcccccggccatcacctcccactcgcagagggcctgcctgggagacctgcgggatatg
atcagcatgtacctgcccccggggggggacgccacagacccttcggccctgcagggcagc
aggttacacagtgtgcaccagcactaccagagcgccgggactgccgtcaatggcaccgta
ccgctcacccacatatag
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