Aythya fuligula (tufted duck): 116494464
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Entry
116494464 CDS
T07966
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aful04515
]
116494464 (PCDH19)
Cell adhesion molecules [BR:
aful04515
]
Cadherins
Protocadherins
116494464 (PCDH19)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
116494464
NCBI-ProteinID:
XP_032052270
UniProt:
A0A6J3DQL1
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Position
13:14910713..14973460
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AA seq
1090 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVIDPRQPTAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPLGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQAKDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNNRNAGSNHIYHHTFAGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEP
DQSEGFHCREECRILGHSDRCWMPRSAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCS
AKRTFATFGKEGGEPPAEERAGNPKGKRTVEPAAGSPKVSGAVREAGNGCEAASPVTSPL
HLKSPAAYGGLPCPAGRGPQPPANTGPARPAEAEPRGADSEGGLQEGNPLLQDRREKDSP
AARRLRDIVL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcccggcgctgctgggggccgccttgctgtgggccggcgccggggccctc
gtcaacctcaagtactcggtggaggaggagcagcgggccggcaccgtgatcgccaacgtc
gccaaggacgcccgggacgccggtttcgtgatagacccccggcagcccaccgctttccgg
gtggtctccaactcggccccccacctggtggacatcagccccgggtccgggctgctggtg
accaagcagaagatcgaccgggacctgctgtgccggcagagccccaagtgcgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctc
aacgacaacgcgcccagcttccccaccgaccagatcgagctggaaatctccgagactgcc
agccccggcacccgggtgccgctggagagtgcctacgacccggactcgggcagctttggt
gtgcagagctacgagatcacccccaacgacctctttgggctggagaccaagacgcgggga
gatgggtcccgctttgccgagctggtggtggagaagagcctggaccgcgagacccagtcc
cactacagctatgtgatcacggcactggacggtggtgacccgcccaacttcggcacggtg
gagctcagcatccgcgtcattgactccaatgacaacaacccgctctttgaggagccggcc
tacaccgtcagtgtgcccgaaaacgccccgctgggtacgccggtcatccgcctcaacgcc
tctgacccggatgagggcaccaacggccaggtactctactctttccacagctacgtctct
gagcgagcccgggagctcttccagatcgacccccagagcggtctcatcacggtcagcggt
gccattgactacgaggagggtcatgtctacgagctggatgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccatcagcgtgcaggatgcaaatgacaac
ccgcccctcatcaacctgctctctgtcaacagcgagctggtggaggtgagcgagaacgcc
ccgccggggtacgtcatcgccctggtgcgggtctcggatcgtgactccggggccaacggg
cgggtgcaatgcaagctcctgggcaacgtgcctttccggctccaggagtacgagagcttc
tccaccatcctggtggacgggcggctagaccgggagcagagggaccagtacaacctcacc
atccaggccaaggacaatggtgtaccctctctacaggccaccaagtccttcaccgtcaag
atcaccgatgagaacgacaaccatccccacttctccaagccctattaccaggtcatcgtg
caggagaacaacaccccaggggcctacctcctctcagtctctgcaagggaccctgacctg
ggcctcaacggcagcgtctcctatcagattgtgccctcccaagtcagggacatgcctgtc
ttcacctatgtctccatcaaccccaactctggagatatctatgctctgaggtccttcaat
catgaacagacaaaggcctttgagttcaaggtcttggcaaaggatggaggtaatccctct
ctgcagagcaatgccaccgtcagggtgattgtcctggatgtcaatgacaacacgcccgtg
atcacggccccacctctggtcaacgggactgcggaggtgtacatccccaggaacgcgggg
gtcggctacttggtaacagtggtcaaggctgatgactatgatgagggtgaaaatggcaga
ctttcctacgaaatggtggaaggagacagaggattttttgagatagaccaggtcaatgga
gaaataaggaccaccagagcctttggggagaatgcaaagacagcctacgagctgattgtg
gtggctcatgaccatggaaaaacatctctgtcggcttcagccttgattttgatatacctg
tctccggccctcgatgcccaggagtccataggatctgttaacctctccctcattttcatt
attgccctggggtctattgcggccattctttttgtcaccatgatcttcgtggcagtaaag
tgcaaaagggataacaaggaaatcaggacctataactgcagaatcgcagagtactcctac
gggcatcagaagaaatcaagcaagaagaagaaaatcagcaagaacgatatccgcctggta
ccgcgggatgtggaagagacggataaaatgaacgttgtgagctgctcctctctcacctca
tccctcaactacttcgactaccaccagcagaccctgccgctgggctgccgccgctccgag
agcaccttcctcaacgtggagagccagaacaacaggaacgccggctccaaccacatctac
caccacaccttcgcggggcagagcccccagcagcccgacctcatcatcaacgggatgccg
ctgcctgagacggagaactactcctttgactccaactacgtgaacagcagagctcattta
ataaagagcagctccacgttcaaggacttggaggggaacagcctgaaggacagcggccac
gaggagagtgaccagaccgacagcgagcatgacgtgcagcgcggcctctactgcgacacg
gccgtcaacgacgtgctcaacaccagcgtcccctccatggggtcccagggccccgagcca
gatcagagcgaaggatttcattgcagggaagagtgccgcatcctgggccactcggaccgg
tgctggatgccccgcagcgccgtgcccagccgcgccaagtcccccgagcacggcaggaac
gtcatcgccctctccatagaggcgacggcagtggacgcggagccttacgcagactgtagc
gccaaaaggaccttcgccaccttcggcaaggagggcggcgagccgccggccgaggaacgg
gccggcaaccccaaaggcaaaagaacggtggagccggccgccggcagccccaaggtgagc
ggcgccgtccgcgaggcgggcaatggctgcgaggccgccagccccgtcacctcgcccctg
cacctgaagagccccgcagcctacggcggcctgccctgccccgccggccgcgggccacag
cccccggcgaacactggccctgcccggcccgcggaggcagagcccaggggggcggacagc
gagggcggcctgcaggagggcaacccgctgctgcaggaccgcagggagaaggactcgccg
gcggccaggagactgagggacatcgtcctctga
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